- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000175324
- LSM1 homolog, mRNA degr…
- LSM4
- LSM4 homolog, U6 small …
- 1.000
- PPI
- LSM2
- LSM2 homolog, U6 small …
- 1.000
- PPI
- LSM3
- LSM3 homolog, U6 small …
- 1.000
- PPI
- LSM5
- LSM5 homolog, U6 small …
- 1.000
- PPI
- PATL1
- PAT1 homolog 1, process…
- 1.000
- PPI
- PATL2
- PAT1 homolog 2
- 1.000
- PPI
- LSM7
- LSM7 homolog, U6 small …
- 1.000
- PPI
- LSM6
- LSM6 homolog, U6 small …
- 1.000
- PPI
- SNRPF
- small nuclear ribonucle…
- 1.000
- PPI
- DDX6
- DEAD-box helicase 6
- 1.000
- PPI
- PAN2
- poly(A) specific ribonu…
- 0.999
- PPI
- XPO1
- exportin 1
- 0.999
- PPI
- UPF1
- UPF1 RNA helicase and A…
- 0.998
- PPI
- CCT5
- chaperonin containing T…
- 0.996
- Complex
- SNRPG
- small nuclear ribonucle…
- 0.995
- Metabolic
- ARPC5
- actin related protein 2…
- 0.995
- Metabolic
- LSM8
- LSM8 homolog, U6 small …
- 0.994
- PPI
- MPDU1
- mannose-P-dolichol util…
- 0.992
- PPI
- SNRPE
- small nuclear ribonucle…
- 0.992
- Metabolic
- RRP1B
- ribosomal RNA processin…
- 0.992
- PPI
- RACK1
- receptor for activated …
- 0.991
- Complex
- RBM8A
- RNA binding motif prote…
- 0.991
- Metabolic
- PABPC4
- poly(A) binding protein…
- 0.990
- Complex
- HSP90AA1
- heat shock protein 90 a…
- 0.989
- PPI
- BUD31
- BUD31 homolog
- 0.988
- Metabolic
- LSM12
- LSM12 homolog
- 0.986
- PPI
- EIF4E
- eukaryotic translation …
- 0.984
- PPI
- EIF4A3
- eukaryotic translation …
- 0.984
- Metabolic
- SNRPD2
- small nuclear ribonucle…
- 0.982
- Metabolic
- SNRPD1
- small nuclear ribonucle…
- 0.981
- Metabolic
ENSG00000175324
LSM1 homolog, mRNA degradation associated
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- Ensembl
- UniProt
- NCBI
RBM8A
RNA binding motif protein 8A
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- Ensembl
- UniProt
- NCBI
HSP90AA1
heat shock protein 90 alpha family class A member 1
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- Ensembl
- UniProt
- NCBI
RRP1B
ribosomal RNA processing 1B
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- Ensembl
- UniProt
- NCBI
SNRPE
small nuclear ribonucleoprotein polypeptide E
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- Ensembl
- UniProt
- NCBI
EIF4E
eukaryotic translation initiation factor 4E
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- Ensembl
- UniProt
- NCBI
BUD31
BUD31 homolog
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- Ensembl
- UniProt
- NCBI
MPDU1
mannose-P-dolichol utilization defect 1
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- Ensembl
- UniProt
- NCBI
XPO1
exportin 1
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- Ensembl
- UniProt
- NCBI
EIF4A3
eukaryotic translation initiation factor 4A3
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- Ensembl
- UniProt
- NCBI
SNRPF
small nuclear ribonucleoprotein polypeptide F
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- Ensembl
- UniProt
- NCBI
SNRPD1
small nuclear ribonucleoprotein D1 polypeptide
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- Ensembl
- UniProt
- NCBI
CCT5
chaperonin containing TCP1 subunit 5
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- Ensembl
- UniProt
- NCBI
UPF1
UPF1 RNA helicase and ATPase
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- Ensembl
- UniProt
- NCBI
PAN2
poly(A) specific ribonuclease subunit PAN2
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- Ensembl
- UniProt
- NCBI
LSM2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
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- Ensembl
- UniProt
- NCBI
PATL2
PAT1 homolog 2
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- Ensembl
- UniProt
- NCBI
SNRPG
small nuclear ribonucleoprotein polypeptide G
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- Ensembl
- UniProt
- NCBI
LSM5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
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- Ensembl
- UniProt
- NCBI
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
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- Ensembl
- UniProt
- NCBI
DDX6
DEAD-box helicase 6
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- Ensembl
- UniProt
- NCBI
PATL1
PAT1 homolog 1, processing body mRNA decay factor
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- Ensembl
- UniProt
- NCBI
RACK1
receptor for activated C kinase 1
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- Ensembl
- UniProt
- D6R909
- D6R9L0
- D6R9Z1
- D6RAC2
- D6RAU2
- D6RBD0
- D6RDI0
- D6REE5
- D6RF23
- D6RFX4
- D6RFZ9
- D6RGK8
- D6RHH4
- D6RHJ5
- E9PD14
- H0Y8R5
- H0Y8W2
- H0Y9P0
- H0YAF8
- H0YAM7
- J3KPE3
- P63244
- NCBI
LSM3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
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- Ensembl
- UniProt
- NCBI
SNRPD2
small nuclear ribonucleoprotein D2 polypeptide
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- Ensembl
- UniProt
- NCBI
LSM4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
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- Ensembl
- UniProt
- NCBI
PABPC4
poly(A) binding protein cytoplasmic 4
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- Ensembl
- UniProt
- NCBI
LSM8
LSM8 homolog, U6 small nuclear RNA associated
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- Ensembl
- UniProt
- NCBI
ARPC5
actin related protein 2/3 complex subunit 5
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- Ensembl
- UniProt
- NCBI
LSM12
LSM12 homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
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- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000175324 | ENSG00000175324 | LSM1 homolog, mRNA degradation associated | ||
| E5RH18 E5RJ47 O15116 | ||||
| 27257 | ||||
| RNA degradation |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
26
|
RBM8A | ENSG00000265241 | RNA binding motif protein 8A | ||
| A0A0J9YW13 Q9Y5S9 | ||||
| 9939 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
19
|
HSP90AA1 | ENSG00000080824 | heat shock protein 90 alpha family class A member 1 | ||
| A0A0U1RR69 G3V2J8 G3V592 H0YJF5 P07900 | ||||
| 3320 | ||||
| Antigen processing and presentation NOD-like receptor signaling pathway PI3K-Akt signaling pathway Estrogen signaling pathway Progesterone-mediated oocyte maturation IL-17 signaling pathway | ||||
| Protein processing in endoplasmic reticulum | ||||
22
|
RRP1B | ENSG00000160208 | ribosomal RNA processing 1B | ||
| Q14684 | ||||
| 23076 | ||||
23
|
SNRPE | ENSG00000182004 | small nuclear ribonucleoprotein polypeptide E | ||
| A6NHK2 P62304 | ||||
| 6635 | ||||
| Spliceosome | ||||
26
|
EIF4E | ENSG00000151247 | eukaryotic translation initiation factor 4E | ||
| D6RBW1 D6RFJ3 H0Y8J7 P06730 | ||||
| 1977 | ||||
| HIF-1 signaling pathway PI3K-Akt signaling pathway mTOR signaling pathway Insulin signaling pathway | ||||
| RNA transport | ||||
29
|
BUD31 | ENSG00000106245 | BUD31 homolog | ||
| C9JCD9 F8WCN7 P41223 | ||||
| 8896 | ||||
| Spliceosome | ||||
16
|
MPDU1 | ENSG00000129255 | mannose-P-dolichol utilization defect 1 | ||
| I3L1D2 I3L261 I3L295 I3L405 I3L4E0 I3L4T1 J3KSI4 J3KT75 J3KTK8 J3QQZ4 J3QRD5 J3QS48 J3QW43 O75352 | ||||
| 9526 | ||||
28
|
XPO1 | ENSG00000082898 | exportin 1 | ||
| C9IYM2 C9IZS4 C9J673 C9JF49 C9JKM9 C9JQ02 C9JV99 F8WF71 H7BZC5 O14980 | ||||
| 7514 | ||||
| Ribosome biogenesis in eukaryotes RNA transport | ||||
26
|
EIF4A3 | ENSG00000141543 | eukaryotic translation initiation factor 4A3 | ||
| I3L3H2 P38919 | ||||
| 9775 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
27
|
SNRPF | ENSG00000139343 | small nuclear ribonucleoprotein polypeptide F | ||
| A0A0B4J254 F8W0W6 P62306 | ||||
| 6636 | ||||
| Spliceosome | ||||
28
|
SNRPD1 | ENSG00000167088 | small nuclear ribonucleoprotein D1 polypeptide | ||
| J3QLI9 J3QLR7 P62314 | ||||
| 6632 | ||||
| Spliceosome | ||||
28
|
CCT5 | ENSG00000150753 | chaperonin containing TCP1 subunit 5 | ||
| B7ZAR1 D6RIZ7 E7ENZ3 E9PCA1 H0Y914 H0Y958 P48643 | ||||
| 22948 | ||||
25
|
UPF1 | ENSG00000005007 | UPF1 RNA helicase and ATPase | ||
| Q92900 | ||||
| 5976 | ||||
| RNA transport mRNA surveillance pathway | ||||
10
|
PAN2 | ENSG00000135473 | poly(A) specific ribonuclease subunit PAN2 | ||
| F8VXK8 Q504Q3 | ||||
| 9924 | ||||
| RNA degradation | ||||
29
|
LSM2 | ENSG00000204392 | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| Q9Y333 | ||||
| 57819 | ||||
| RNA degradation Spliceosome | ||||
16
|
PATL2 | ENSG00000229474 | PAT1 homolog 2 | ||
| C9JE40 H0YMQ2 H0YMS5 H0YN77 H0YNY1 | ||||
| 197135 | ||||
26
|
SNRPG | ENSG00000143977 | small nuclear ribonucleoprotein polypeptide G | ||
| C9JVQ0 F5H013 P62308 Q49AN9 | ||||
| 6637 | ||||
| Spliceosome | ||||
27
|
LSM5 | ENSG00000106355 | LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| B8ZZF8 F8W8Y8 Q9Y4Y9 | ||||
| 23658 | ||||
| RNA degradation Spliceosome | ||||
28
|
LSM7 | ENSG00000130332 | LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| A0A087X2I5 K7EML7 K7ENY5 Q9UK45 | ||||
| 51690 | ||||
| RNA degradation Spliceosome | ||||
28
|
DDX6 | ENSG00000110367 | DEAD-box helicase 6 | ||
| P26196 Q8IV96 | ||||
| 1656 | ||||
| RNA degradation | ||||
26
|
PATL1 | ENSG00000166889 | PAT1 homolog 1, processing body mRNA decay factor | ||
| Q86TB9 | ||||
| 219988 | ||||
| RNA degradation | ||||
27
|
RACK1 | ENSG00000204628 | receptor for activated C kinase 1 | ||
| D6R909 D6R9L0 D6R9Z1 D6RAC2 D6RAU2 D6RBD0 D6RDI0 D6REE5 D6RF23 D6RFX4 D6RFZ9 D6RGK8 D6RHH4 D6RHJ5 E9PD14 H0Y8R5 H0Y8W2 H0Y9P0 H0YAF8 H0YAM7 J3KPE3 P63244 | ||||
| 10399 | ||||
27
|
LSM3 | ENSG00000170860 | LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| P62310 | ||||
| 27258 | ||||
| RNA degradation Spliceosome | ||||
26
|
SNRPD2 | ENSG00000125743 | small nuclear ribonucleoprotein D2 polypeptide | ||
| K7EJB5 K7ERG4 P62316 | ||||
| 6633 | ||||
| Spliceosome | ||||
30
|
LSM4 | ENSG00000130520 | LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| M0QXB0 Q9Y4Z0 U3KQK1 V9GZ56 | ||||
| 25804 | ||||
| RNA degradation Spliceosome | ||||
27
|
PABPC4 | ENSG00000090621 | poly(A) binding protein cytoplasmic 4 | ||
| B1ANR0 B1ANR1 H0Y5F5 H0Y6X6 H0YCC8 H0YEQ8 H0YER0 H0YEU6 Q13310 | ||||
| 8761 | ||||
| RNA degradation RNA transport mRNA surveillance pathway | ||||
23
|
LSM8 | ENSG00000128534 | LSM8 homolog, U6 small nuclear RNA associated | ||
| C9JIZ0 C9JNV3 F2Z2Y6 O95777 | ||||
| 51691 | ||||
| RNA degradation Spliceosome | ||||
22
|
ARPC5 | ENSG00000162704 | actin related protein 2/3 complex subunit 5 | ||
| B1ALC0 O15511 | ||||
| 10092 | ||||
| Fc gamma R-mediated phagocytosis | ||||
| Endocytosis | ||||
12
|
LSM12 | ENSG00000161654 | LSM12 homolog | ||
| K7ELG9 Q3MHD2 | ||||
| 124801 | ||||
27
|
LSM6 | ENSG00000164167 | LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| P62312 | ||||
| 11157 | ||||
| RNA degradation Spliceosome |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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jSquid_subnetworks.xml | 335.35 KB | |
H.sapiens_subnetwork.tsv | 74.77 KB |