Links per species

Sizes of the summary networks with the strongest links from each class for different ranges of final Bayesian scores (FBS). The fist interval corresponds roughly to an confidence score interval of 0.1 to 0.25 the second interval to 0.25 to 0.75 and the last interval to 0.75 to 1.

Genes per species

Number of genes (nodes) in the summary networks of the different species.

Evidence type contribution

Species contribution

Relative impact of the evidence from the different species as faction of the total FBS. For most species more than 50% of the evidence comes from other species.

Data sources

SpeciesTypeData
All DOM UniDomInt - Pfam [30] download
E. coli GIN Babu (2014) download
S. cerevisiae GIN Costanzo et al. (2010) download
S. cerevisiae GIN Costanzo et al. (2017) download
A. thaliana MEX GSE12404 download
A. thaliana MEX GSE42408 download
A. thaliana MEX GSE41212 download
A. thaliana MEX GSE46318 download
A. thaliana MEX GSE65046 download
A. thaliana MEX GSE41935 download
A. thaliana MEX Schmid et al. (2005) download
A. thaliana MEX GSE45183 download
B. subtilis MEX GSE27219 download
B. subtilis MEX GSE69575 download
B. subtilis MEX GSE44125 download
B. subtilis MEX GSE19831 download
B. subtilis MEX GSE67023 download
B. taurus MEX GSE23837 download
C. elegans MEX GSE2180 download
C. elegans MEX GSE41366 download
C. elegans MEX GSE22383 download
C. elegans MEX GSE34650 download
C. elegans MEX GSE38997 download
C. elegans MEX GSE21012 download
C. elegans MEX GSE77905 download
C. elegans MEX GSE42592 download
C. familiaris MEX GSE39005 download
C. familiaris MEX GSE58442 download
C. familiaris MEX GSE20113 download
C. familiaris MEX GSE48319 download
C. familiaris MEX GSE29497 download
C. familiaris MEX GSE23760 download
D. melanogaster MEX GSE38106 download
D. melanogaster MEX GSE67547 download
D. melanogaster MEX GSE23320 download
D. melanogaster MEX GSE31386 download
D. melanogaster MEX GSE11316 download
D. melanogaster MEX GSE5430 download
D. melanogaster MEX GSE11280 download
D. melanogaster MEX Li & White (2003) download
D. rerio MEX GSE34716 download
D. rerio MEX GSE42856 download
D. rerio MEX GSE44263 download
D. rerio MEX GSE57946 download
E. coli MEX GSE40811 download
E. coli MEX GSE20305 download
E. coli MEX GSE7265 download
G. gallus MEX GSE10538 download
G. gallus MEX GSE9745 download
G. gallus MEX GSE70756 download
G. gallus MEX GSE61520 download
H. sapiens MEX GSE11882 download
H. sapiens MEX GSE33315 download
H. sapiens MEX GSE26440 download
H. sapiens MEX GSE7307 download
H. sapiens MEX GSE29288 download
H. sapiens MEX GSE41137 download
H. sapiens MEX GSE45878 download
M. musculus MEX GSE9954 download
M. musculus MEX GSE7404 download
M. musculus MEX GSE29685 download
M. musculus MEX GSE68077 download
M. musculus MEX GSE45035 download
M. musculus MEX GSE54089 download
M. musculus MEX GSE51321 download
M. musculus MEX GSE25322 download
M. musculus MEX GSE10246 download
O. sativa MEX GSE36040 download
O. sativa MEX GSE62896 download
O. sativa MEX GSE36777 download
O. sativa MEX GSE39429 download
P. falciparum MEX GSE19468 download
P. falciparum MEX GSE66669 download
P. falciparum MEX GSE59099 download
P. falciparum MEX GSE59097 download
R. norvegicus MEX GSE29488 download
R. norvegicus MEX GSE75658 download
R. norvegicus MEX GSE69334 download
R. norvegicus MEX GSE71306 download
R. norvegicus MEX GSE63362 download
R. norvegicus MEX GSE40348 download
R. norvegicus MEX GSE57816 download
R. norvegicus MEX GSE47752 download
R. norvegicus MEX GSE23093 download
R. norvegicus MEX GSE24363 download
R. norvegicus MEX GSE4776 download
R. norvegicus MEX GSE16233 download
R. norvegicus MEX GSE31709 download
S. cerevisiae MEX GSE25909 download
S. cerevisiae MEX GSE5499 download
S. cerevisiae MEX GSE33099 download
S. cerevisiae MEX GSE19116 download
S. cerevisiae MEX GSE45115 download
S. cerevisiae MEX GSE11452 download
S. cerevisiae MEX GSE8561 download
S. cerevisiae MEX GSE33097 download
S. cerevisiae MEX Gasch et al. (2000) download
S. cerevisiae MEX GSE26169 download
S. pombe MEX GSE4284 download
C. elegans MIR microRNA.org Aug 2010 download
D. melanogaster MIR microRNA.org Aug 2010 download
H. sapiens MIR microRNA.org Aug 2010 download
M. musculus MIR microRNA.org Aug 2010 download
H. sapiens PEX HPA 15 download
A. thaliana PHP Phylogenetic profile - InParanoid 8 download
All PHP Phylogenetic tree - InParanoid 8 download
B. subtilis PHP Phylogenetic profile - InParanoid 8 download
B. taurus PHP Phylogenetic profile - InParanoid 8 download
C. elegans PHP Phylogenetic profile - InParanoid 8 download
C. familiaris PHP Phylogenetic profile - InParanoid 8 download
C. intestinalis PHP Phylogenetic profile - InParanoid 8 download
D. melanogaster PHP Phylogenetic profile - InParanoid 8 download
D. rerio PHP Phylogenetic profile - InParanoid 8 download
E. coli PHP Phylogenetic profile - InParanoid 8 download
G. gallus PHP Phylogenetic profile - InParanoid 8 download
H. sapiens PHP Phylogenetic profile - InParanoid 8 download
M. musculus PHP Phylogenetic profile - InParanoid 8 download
O. sativa PHP Phylogenetic profile - InParanoid 8 download
P. falciparum PHP Phylogenetic profile - InParanoid 8 download
R. norvegicus PHP Phylogenetic profile - InParanoid 8 download
S. cerevisiae PHP Phylogenetic profile - InParanoid 8 download
S. pombe PHP Phylogenetic profile - InParanoid 8 download
A. thaliana PIN iRefIndex 14 download
B. subtilis PIN iRefIndex 14 download
B. taurus PIN iRefIndex 14 download
C. elegans PIN iRefIndex 14 download
D. melanogaster PIN iRefIndex 14 download
D. rerio PIN iRefIndex 14 download
E. coli PIN iRefIndex 14 download
G. gallus PIN iRefIndex 14 download
H. sapiens PIN iRefIndex 14 download
M. musculus PIN iRefIndex 14 download
O. sativa PIN iRefIndex 14 download
P. falciparum PIN iRefIndex 14 download
R. norvegicus PIN iRefIndex 14 download
S. cerevisiae PIN iRefIndex 14 download
S. pombe PIN iRefIndex 14 download
A. thaliana QMS Pax-DB v4.0 download
D. rerio QMS Pax-DB v4.0 download
H. sapiens QMS Pax-DB v4.0 download
M. musculus QMS Pax-DB v4.0 download
A. thaliana SCL GO cellular component (2016) download
B. subtilis SCL GO cellular component (2016) download
B. taurus SCL GO cellular component (2016) download
C. elegans SCL GO cellular component (2016) download
C. familiaris SCL GO cellular component (2016) download
C. intestinalis SCL GO cellular component (2016) download
D. melanogaster SCL GO cellular component (2016) download
D. rerio SCL GO cellular component (2016) download
E. coli SCL GO cellular component (2016) download
G. gallus SCL GO cellular component (2016) download
H. sapiens SCL GO cellular component (2016) download
M. musculus SCL GO cellular component (2016) download
O. sativa SCL GO cellular component (2016) download
P. falciparum SCL GO cellular component (2016) download
R. norvegicus SCL GO cellular component (2016) download
S. cerevisiae SCL GO cellular component (2016) download
S. pombe SCL GO cellular component (2016) download
C. elegans TFB modEncode 1k -0.5k combined peaks download
D. melanogaster TFB modEncode pRN TF only download
H. sapiens TFB ENCODE filtered download
M. musculus TFB ENCODE 1k -0.5k replicated download
S. cerevisiae TFB Yeastract 2016 download
S. cerevisiae TFB yeastract 2011 download
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