Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000172409
- cleavage factor polyrib…
- TSEN2
- tRNA splicing endonucle…
- 0.989
- PPI
- TSEN54
- tRNA splicing endonucle…
- 0.981
- PPI
- TSEN34
- tRNA splicing endonucle…
- 0.978
- PPI
- TSEN15
- tRNA splicing endonucle…
- 0.978
- PPI
- CPSF7
- cleavage and polyadenyl…
- 0.962
- PPI
- HCFC1
- host cell factor C1
- 0.926
- PPI
- CDKN2AIP
- CDKN2A interacting prot…
- 0.908
- Complex
- CPSF6
- cleavage and polyadenyl…
- 0.889
- PPI
- SNW1
- SNW domain containing 1
- 0.848
- PPI
- SSB
- small RNA binding exonu…
- 0.848
- Complex
- NUDT21
- nudix hydrolase 21
- 0.814
- PPI
- AMMECR1
- AMMECR nuclear protein 1
- 0.765
- PPI
- TNRC6A
- trinucleotide repeat co…
- 0.563
- PPI
- POLR2A
- RNA polymerase II subun…
- 0.478
- Complex
- HIF1A
- hypoxia inducible facto…
- 0.455
- PPI
Subnetwork gene interactions
ENSG00000172409
cleavage factor polyribonucleotide kinase subunit 1
FunCoup
- Use as query
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- Ensembl
- UniProt
- NCBI
SNW1
SNW domain containing 1
FunCoup
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- Ensembl
- UniProt
- NCBI
POLR2A
RNA polymerase II subunit A
FunCoup
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- Ensembl
- UniProt
- NCBI
TSEN54
tRNA splicing endonuclease subunit 54
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TNRC6A
trinucleotide repeat containing adaptor 6A
FunCoup
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
TSEN34
tRNA splicing endonuclease subunit 34
FunCoup
- Use as query
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- Ensembl
- UniProt
- NCBI
TSEN2
tRNA splicing endonuclease subunit 2
FunCoup
- Use as query
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- Ensembl
- UniProt
- NCBI
SSB
small RNA binding exonuclease protection factor La
FunCoup
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- Ensembl
- UniProt
- NCBI
CPSF7
cleavage and polyadenylation specific factor 7
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CDKN2AIP
CDKN2A interacting protein
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HIF1A
hypoxia inducible factor 1 subunit alpha
FunCoup
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
HCFC1
host cell factor C1
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CPSF6
cleavage and polyadenylation specific factor 6
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TSEN15
tRNA splicing endonuclease subunit 15
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A2R8Y5L0
- A0A2R8Y5Q6
- A0A2R8Y5W5
- A0A2R8Y6A4
- A0A2R8Y6B3
- A0A2R8Y6M5
- A0A2R8Y7T8
- A0A2R8YDU8
- A0A2R8YEM0
- A0A2R8YG40
- A0A2R8YHG0
- A0A2U3TZM3
- E9PPN1
- F2Z3M0
- H0YCV5
- Q8WW01
- NCBI
NUDT21
nudix hydrolase 21
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
AMMECR1
AMMECR nuclear protein 1
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Query genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
15
|
ENSG00000172409 | ENSG00000172409 | cleavage factor polyribonucleotide kinase subunit 1 | ||
| E9PJM4 E9PKV5 E9PL17 Q92989 | ||||
| 10978 | ||||
| mRNA surveillance pathway |
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
7
|
SNW1 | ENSG00000100603 | SNW domain containing 1 | ||
| G3V3A4 G3V4E0 G3V4X8 G3V5R3 Q13573 | ||||
| 22938 | ||||
| Notch signaling pathway | ||||
| Spliceosome | ||||
11
|
POLR2A | ENSG00000181222 | RNA polymerase II subunit A | ||
| A0A590UJN4 A0A590UKB6 P24928 | ||||
| 5430 | ||||
| RNA polymerase | ||||
8
|
TSEN54 | ENSG00000182173 | tRNA splicing endonuclease subunit 54 | ||
| E7EN92 J3KRC5 J3QLM6 J3QRQ5 J9JIH8 Q7Z6J9 | ||||
| 283989 | ||||
2
|
TNRC6A | ENSG00000090905 | trinucleotide repeat containing adaptor 6A | ||
| H3BRT3 H3BTQ1 H7C269 I3L218 I3L3S5 Q8NDV7 | ||||
| 27327 | ||||
7
|
TSEN34 | ENSG00000170892 | tRNA splicing endonuclease subunit 34 | ||
| A0A590UJ73 A0A590UJW4 A0A590UK37 A9C4B9 B0V3J0 E7EQB3 Q9BSV6 | ||||
| 79042 | ||||
7
|
TSEN2 | ENSG00000154743 | tRNA splicing endonuclease subunit 2 | ||
| C9J7Z4 H7C2Z3 H7C301 Q8NCE0 | ||||
| 80746 | ||||
10
|
SSB | ENSG00000138385 | small RNA binding exonuclease protection factor La | ||
| E7ERC4 E9PFL9 E9PGX9 P05455 | ||||
| 6741 | ||||
6
|
CPSF7 | ENSG00000149532 | cleavage and polyadenylation specific factor 7 | ||
| C9J286 C9J323 C9JM38 F5GXA3 F5H047 F5H1W4 F5H2K8 F5H5B7 F5H669 F5H6A8 F5H6M0 F5H6P5 J3QT54 Q8N684 | ||||
| 79869 | ||||
| mRNA surveillance pathway | ||||
8
|
CDKN2AIP | ENSG00000168564 | CDKN2A interacting protein | ||
| D6RGD2 J3KNE1 Q9NXV6 | ||||
| 55602 | ||||
2
|
HIF1A | ENSG00000100644 | hypoxia inducible factor 1 subunit alpha | ||
| A8MYV6 F8W9L0 Q16665 | ||||
| 3091 | ||||
| Thyroid hormone signaling pathway HIF-1 signaling pathway | ||||
| Autophagy - animal | ||||
1
|
HCFC1 | ENSG00000172534 | host cell factor C1 | ||
| A6NEM2 H7C1C4 P51610 | ||||
| 3054 | ||||
7
|
CPSF6 | ENSG00000111605 | cleavage and polyadenylation specific factor 6 | ||
| A0A3B3ISW1 F8VNP8 F8W084 F8WJN3 Q16630 | ||||
| 11052 | ||||
| mRNA surveillance pathway | ||||
7
|
TSEN15 | ENSG00000198860 | tRNA splicing endonuclease subunit 15 | ||
| A0A2R8Y5L0 A0A2R8Y5Q6 A0A2R8Y5W5 A0A2R8Y6A4 A0A2R8Y6B3 A0A2R8Y6M5 A0A2R8Y7T8 A0A2R8YDU8 A0A2R8YEM0 A0A2R8YG40 A0A2R8YHG0 A0A2U3TZM3 E9PPN1 F2Z3M0 H0YCV5 Q8WW01 | ||||
| 116461 | ||||
6
|
NUDT21 | ENSG00000167005 | nudix hydrolase 21 | ||
| H3BND3 H3BV41 O43809 | ||||
| 11051 | ||||
| mRNA surveillance pathway | ||||
2
|
AMMECR1 | ENSG00000101935 | AMMECR nuclear protein 1 | ||
| Q9Y4X0 | ||||
| 9949 |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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Copied subnetwork genes to clipboard
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jSquid_subnetworks.xml | 142.60 KB | |
H.sapiens_subnetwork.tsv | 8.09 KB |