- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000165494
- PCF11 cleavage and poly…
- OGT
- O-linked N-acetylglucos…
- 0.998
- Complex
- SRRM1
- serine and arginine rep…
- 0.996
- PPI
- POLR2A
- RNA polymerase II subun…
- 0.996
- Complex
- BUD13
- BUD13 homolog
- 0.995
- Complex
- TIA1
- TIA1 cytotoxic granule …
- 0.995
- Complex
- CDK8
- cyclin dependent kinase…
- 0.995
- PPI
- TNRC6A
- trinucleotide repeat co…
- 0.990
- PPI
- KDM3B
- lysine demethylase 3B
- 0.989
- Complex
- SLC12A2
- solute carrier family 1…
- 0.986
- Complex
- RPA1
- replication protein A1
- 0.980
- PPI
- CDKN2AIP
- CDKN2A interacting prot…
- 0.973
- Complex
- GEMIN5
- gem nuclear organelle a…
- 0.972
- Complex
- TSEN54
- tRNA splicing endonucle…
- 0.972
- Complex
- MRE11
- MRE11 homolog, double s…
- 0.969
- PPI
- SNW1
- SNW domain containing 1
- 0.963
- PPI
- DECR1
- 2,4-dienoyl-CoA reducta…
- 0.954
- Complex
- CCNL1
- cyclin L1
- 0.952
- Metabolic
- TSEN34
- tRNA splicing endonucle…
- 0.943
- Complex
- EWSR1
- EWS RNA binding protein…
- 0.940
- PPI
- SUCLG2
- succinate-CoA ligase GD…
- 0.937
- Complex
- ALYREF
- Aly/REF export factor
- 0.905
- PPI
- TSEN15
- tRNA splicing endonucle…
- 0.900
- Complex
- RBM39
- RNA binding motif prote…
- 0.886
- Metabolic
- NBAS
- NBAS subunit of NRZ tet…
- 0.877
- Complex
- RAB11FIP2
- RAB11 family interactin…
- 0.870
- PPI
- UTP4
- UTP4 small subunit proc…
- 0.842
- Complex
- CD2BP2
- CD2 cytoplasmic tail bi…
- 0.834
- Complex
- PRPF4B
- pre-mRNA processing fac…
- 0.819
- Metabolic
- TSEN2
- tRNA splicing endonucle…
- 0.817
- PPI
- PNN
- pinin, desmosome associ…
- 0.817
- Complex
ENSG00000165494
PCF11 cleavage and polyadenylation factor subunit
- Use as query
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- Ensembl
- UniProt
- NCBI
TIA1
TIA1 cytotoxic granule associated RNA binding protein
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- Ensembl
- UniProt
- NCBI
DECR1
2,4-dienoyl-CoA reductase 1
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- Ensembl
- UniProt
- NCBI
CDK8
cyclin dependent kinase 8
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- Ensembl
- UniProt
- NCBI
CD2BP2
CD2 cytoplasmic tail binding protein 2
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- Ensembl
- UniProt
- NCBI
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase
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- Ensembl
- UniProt
- NCBI
SLC12A2
solute carrier family 12 member 2
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- Ensembl
- UniProt
- NCBI
KDM3B
lysine demethylase 3B
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- Ensembl
- UniProt
- NCBI
GEMIN5
gem nuclear organelle associated protein 5
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- Add to current query
- Ensembl
- UniProt
- NCBI
RBM39
RNA binding motif protein 39
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A087X122
- A0A0U1RQH7
- A0A0U1RQW2
- A8MYG5
- F2Z2Z5
- F2Z3E6
- F8WF24
- F8WF73
- G3XAC6
- H0Y4X3
- H0Y6I9
- H7BZG3
- Q14498
- Q5QP22
- Q5QP23
- NCBI
PNN
pinin, desmosome associated protein
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- Add to current query
- Ensembl
- UniProt
- NCBI
RAB11FIP2
RAB11 family interacting protein 2
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- Ensembl
- UniProt
- NCBI
TSEN54
tRNA splicing endonuclease subunit 54
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
UTP4
UTP4 small subunit processome component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CCNL1
cyclin L1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NBAS
NBAS subunit of NRZ tethering complex
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- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF4B
pre-mRNA processing factor 4B
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- Add to current query
- Ensembl
- UniProt
- NCBI
TSEN15
tRNA splicing endonuclease subunit 15
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A2R8Y5L0
- A0A2R8Y5Q6
- A0A2R8Y5W5
- A0A2R8Y6A4
- A0A2R8Y6B3
- A0A2R8Y6M5
- A0A2R8Y7T8
- A0A2R8YDU8
- A0A2R8YEM0
- A0A2R8YG40
- A0A2R8YHG0
- A0A2U3TZM3
- E9PPN1
- F2Z3M0
- H0YCV5
- Q8WW01
- NCBI
SRRM1
serine and arginine repetitive matrix 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
MRE11
MRE11 homolog, double strand break repair nuclease
- Use as query
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- Ensembl
- UniProt
- NCBI
POLR2A
RNA polymerase II subunit A
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- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNW1
SNW domain containing 1
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- Ensembl
- UniProt
- NCBI
TSEN34
tRNA splicing endonuclease subunit 34
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- Ensembl
- UniProt
- NCBI
SUCLG2
succinate-CoA ligase GDP-forming subunit beta
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ALYREF
Aly/REF export factor
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- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TSEN2
tRNA splicing endonuclease subunit 2
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- Ensembl
- UniProt
- NCBI
RPA1
replication protein A1
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- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EWSR1
EWS RNA binding protein 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BUD13
BUD13 homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TNRC6A
trinucleotide repeat containing adaptor 6A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CDKN2AIP
CDKN2A interacting protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000165494 | ENSG00000165494 | PCF11 cleavage and polyadenylation factor subunit | ||
| E9PKN0 E9PNY7 E9PQ01 E9PQF9 O94913 | ||||
| 51585 | ||||
| mRNA surveillance pathway |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
22
|
TIA1 | ENSG00000116001 | TIA1 cytotoxic granule associated RNA binding protein | ||
| C9JTN7 E5RG67 E5RGV5 F8W8I6 F8WE16 H7BY49 P31483 | ||||
| 7072 | ||||
13
|
DECR1 | ENSG00000104325 | 2,4-dienoyl-CoA reductase 1 | ||
| E5RFV2 E5RGS6 E5RHR1 E5RID6 E5RJD2 E5RJG7 H0YAW3 Q16698 | ||||
| 1666 | ||||
16
|
CDK8 | ENSG00000132964 | cyclin dependent kinase 8 | ||
| A0A0D9SEP3 A0A0D9SFZ2 F5H6D4 P49336 | ||||
| 1024 | ||||
21
|
CD2BP2 | ENSG00000169217 | CD2 cytoplasmic tail binding protein 2 | ||
| O95400 | ||||
| 10421 | ||||
22
|
OGT | ENSG00000147162 | O-linked N-acetylglucosamine (GlcNAc) transferase | ||
| C9JZL3 O15294 | ||||
| 8473 | ||||
| Other types of O-glycan biosynthesis | ||||
12
|
SLC12A2 | ENSG00000064651 | solute carrier family 12 member 2 | ||
| G3XAL9 P55011 | ||||
| 6558 | ||||
14
|
KDM3B | ENSG00000120733 | lysine demethylase 3B | ||
| H0Y946 H0Y9V5 Q7LBC6 | ||||
| 51780 | ||||
18
|
GEMIN5 | ENSG00000082516 | gem nuclear organelle associated protein 5 | ||
| Q8TEQ6 | ||||
| 25929 | ||||
| RNA transport | ||||
18
|
RBM39 | ENSG00000131051 | RNA binding motif protein 39 | ||
| A0A087X122 A0A0U1RQH7 A0A0U1RQW2 A8MYG5 F2Z2Z5 F2Z3E6 F8WF24 F8WF73 G3XAC6 H0Y4X3 H0Y6I9 H7BZG3 Q14498 Q5QP22 Q5QP23 | ||||
| 9584 | ||||
15
|
PNN | ENSG00000100941 | pinin, desmosome associated protein | ||
| G3V579 G3V5F0 Q9H307 | ||||
| 5411 | ||||
| RNA transport mRNA surveillance pathway | ||||
14
|
RAB11FIP2 | ENSG00000107560 | RAB11 family interacting protein 2 | ||
| Q7L804 | ||||
| 22841 | ||||
| Endocytosis | ||||
7
|
TSEN54 | ENSG00000182173 | tRNA splicing endonuclease subunit 54 | ||
| E7EN92 J3KRC5 J3QLM6 J3QRQ5 J9JIH8 Q7Z6J9 | ||||
| 283989 | ||||
21
|
UTP4 | ENSG00000141076 | UTP4 small subunit processome component | ||
| H3BPD7 H3BRM8 H3BSH7 I3L4T9 J3KSE6 J3KSI1 J3KTR0 Q969X6 | ||||
| 84916 | ||||
| Ribosome biogenesis in eukaryotes | ||||
12
|
CCNL1 | ENSG00000163660 | cyclin L1 | ||
| H7C4G1 Q9UK58 | ||||
| 57018 | ||||
14
|
NBAS | ENSG00000151779 | NBAS subunit of NRZ tethering complex | ||
| A2RRP1 C9JCM7 H0Y5G7 H7BZR3 H7BZU5 H7C007 H7C1U4 H7C1Y9 | ||||
| 51594 | ||||
16
|
PRPF4B | ENSG00000112739 | pre-mRNA processing factor 4B | ||
| H0YDJ3 Q13523 | ||||
| 8899 | ||||
7
|
TSEN15 | ENSG00000198860 | tRNA splicing endonuclease subunit 15 | ||
| A0A2R8Y5L0 A0A2R8Y5Q6 A0A2R8Y5W5 A0A2R8Y6A4 A0A2R8Y6B3 A0A2R8Y6M5 A0A2R8Y7T8 A0A2R8YDU8 A0A2R8YEM0 A0A2R8YG40 A0A2R8YHG0 A0A2U3TZM3 E9PPN1 F2Z3M0 H0YCV5 Q8WW01 | ||||
| 116461 | ||||
12
|
SRRM1 | ENSG00000133226 | serine and arginine repetitive matrix 1 | ||
| A9Z1X7 E9PCT1 M0QXG5 M0R088 M0R1E7 Q8IYB3 | ||||
| 10250 | ||||
| RNA transport mRNA surveillance pathway | ||||
22
|
MRE11 | ENSG00000020922 | MRE11 homolog, double strand break repair nuclease | ||
| F5GXT0 F5H256 F5H742 F8W7U8 P49959 | ||||
| 4361 | ||||
| Non-homologous end-joining Homologous recombination | ||||
18
|
POLR2A | ENSG00000181222 | RNA polymerase II subunit A | ||
| A0A590UJN4 A0A590UKB6 P24928 | ||||
| 5430 | ||||
| RNA polymerase | ||||
16
|
SNW1 | ENSG00000100603 | SNW domain containing 1 | ||
| G3V3A4 G3V4E0 G3V4X8 G3V5R3 Q13573 | ||||
| 22938 | ||||
| Notch signaling pathway | ||||
| Spliceosome | ||||
6
|
TSEN34 | ENSG00000170892 | tRNA splicing endonuclease subunit 34 | ||
| A0A590UJ73 A0A590UJW4 A0A590UK37 A9C4B9 B0V3J0 E7EQB3 Q9BSV6 | ||||
| 79042 | ||||
13
|
SUCLG2 | ENSG00000172340 | succinate-CoA ligase GDP-forming subunit beta | ||
| E9PDQ8 H0Y852 Q96I99 | ||||
| 8801 | ||||
| Citrate cycle (TCA cycle) Carbon metabolism Propanoate metabolism | ||||
14
|
ALYREF | ENSG00000183684 | Aly/REF export factor | ||
| E9PB61 Q86V81 | ||||
| 10189 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
6
|
TSEN2 | ENSG00000154743 | tRNA splicing endonuclease subunit 2 | ||
| C9J7Z4 H7C2Z3 H7C301 Q8NCE0 | ||||
| 80746 | ||||
15
|
RPA1 | ENSG00000132383 | replication protein A1 | ||
| I3L2M5 I3L4R8 I3L524 P27694 | ||||
| 6117 | ||||
| DNA replication Fanconi anemia pathway Homologous recombination Mismatch repair Nucleotide excision repair | ||||
10
|
EWSR1 | ENSG00000182944 | EWS RNA binding protein 1 | ||
| A0A0D9SFL3 B0QYJ3 B0QYJ4 B0QYJ5 B0QYJ6 B0QYJ7 B0QYK0 C9JGE3 F8WC90 H7BY36 Q01844 | ||||
| 2130 | ||||
21
|
BUD13 | ENSG00000137656 | BUD13 homolog | ||
| H7C462 Q9BRD0 | ||||
| 84811 | ||||
3
|
TNRC6A | ENSG00000090905 | trinucleotide repeat containing adaptor 6A | ||
| H3BRT3 H3BTQ1 H7C269 I3L218 I3L3S5 Q8NDV7 | ||||
| 27327 | ||||
8
|
CDKN2AIP | ENSG00000168564 | CDKN2A interacting protein | ||
| D6RGD2 J3KNE1 Q9NXV6 | ||||
| 55602 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
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jSquid_subnetworks.xml | 271.48 KB | |
H.sapiens_subnetwork.tsv | 39.61 KB |