- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000161265
- U2 small nuclear RNA au…
- U2AF2
- U2 small nuclear RNA au…
- 0.998
- Metabolic
- EFTUD2
- elongation factor Tu GT…
- 0.998
- PPI
- SNRNP70
- small nuclear ribonucle…
- 0.998
- PPI
- PPIE
- peptidylprolyl isomeras…
- 0.998
- PPI
- SNRNP40
- small nuclear ribonucle…
- 0.995
- Metabolic
- RNPS1
- RNA binding protein wit…
- 0.992
- PPI
- SF3B2
- splicing factor 3b subu…
- 0.987
- Metabolic
- PRPF4
- pre-mRNA processing fac…
- 0.984
- Metabolic
- DDX39B
- DExD-box helicase 39B
- 0.981
- Metabolic
- SRSF3
- serine and arginine ric…
- 0.980
- Metabolic
- RBM39
- RNA binding motif prote…
- 0.979
- Metabolic
- PRPF31
- pre-mRNA processing fac…
- 0.976
- Metabolic
- CWC22
- CWC22 spliceosome assoc…
- 0.976
- Metabolic
- BOP1
- BOP1 ribosomal biogenes…
- 0.975
- Metabolic
- PRPF6
- pre-mRNA processing fac…
- 0.974
- Metabolic
- NCBP2
- nuclear cap binding pro…
- 0.973
- Metabolic
- SRSF7
- serine and arginine ric…
- 0.970
- Metabolic
- CIAO1
- cytosolic iron-sulfur a…
- 0.970
- Metabolic
- PPIL1
- peptidylprolyl isomeras…
- 0.964
- Metabolic
- CWC15
- CWC15 spliceosome assoc…
- 0.962
- Metabolic
- TRA2B
- transformer 2 beta homo…
- 0.962
- Metabolic
- DDX39A
- DExD-box helicase 39A
- 0.961
- Metabolic
- SMARCD3
- SWI/SNF related, matrix…
- 0.954
- PPI
- PPIL3
- peptidylprolyl isomeras…
- 0.953
- Metabolic
- TRA2A
- transformer 2 alpha hom…
- 0.953
- Metabolic
- SNRPD2
- small nuclear ribonucle…
- 0.953
- Metabolic
- USP39
- ubiquitin specific pept…
- 0.948
- Metabolic
- SMARCD2
- SWI/SNF related, matrix…
- 0.946
- PPI
- PRPF8
- pre-mRNA processing fac…
- 0.946
- Metabolic
- LSM3
- LSM3 homolog, U6 small …
- 0.945
- Metabolic
ENSG00000161265
U2 small nuclear RNA auxiliary factor 1 like 4
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- Ensembl
- UniProt
- NCBI
DDX39B
DExD-box helicase 39B
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- Ensembl
- UniProt
- A0A0A0MT12
- F6QYI9
- F6R6M7
- F6S2B7
- F6S4E6
- F6SXL5
- F6TRA5
- F6U6E2
- F6UJC5
- F6WLT2
- H0Y400
- H0YCC6
- Q13838
- Q5STU3
- NCBI
PRPF4
pre-mRNA processing factor 4
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- Ensembl
- UniProt
- NCBI
CIAO1
cytosolic iron-sulfur assembly component 1
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- Ensembl
- UniProt
- NCBI
SRSF3
serine and arginine rich splicing factor 3
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- Ensembl
- UniProt
- NCBI
CWC22
CWC22 spliceosome associated protein homolog
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- Ensembl
- UniProt
- NCBI
TRA2A
transformer 2 alpha homolog
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- Ensembl
- UniProt
- NCBI
SNRNP40
small nuclear ribonucleoprotein U5 subunit 40
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- Ensembl
- UniProt
- NCBI
PPIE
peptidylprolyl isomerase E
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- Ensembl
- UniProt
- NCBI
PRPF6
pre-mRNA processing factor 6
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- Ensembl
- UniProt
- NCBI
PPIL1
peptidylprolyl isomerase like 1
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- Ensembl
- UniProt
- NCBI
DDX39A
DExD-box helicase 39A
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- Ensembl
- UniProt
- NCBI
LSM3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
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- Ensembl
- UniProt
- NCBI
SNRNP70
small nuclear ribonucleoprotein U1 subunit 70
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- Ensembl
- UniProt
- NCBI
NCBP2
nuclear cap binding protein subunit 2
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- Ensembl
- UniProt
- NCBI
SNRPD2
small nuclear ribonucleoprotein D2 polypeptide
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- Ensembl
- UniProt
- NCBI
CWC15
CWC15 spliceosome associated protein homolog
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- Ensembl
- UniProt
- NCBI
RNPS1
RNA binding protein with serine rich domain 1
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- Ensembl
- UniProt
- H3BMM9
- H3BMS0
- H3BNI3
- H3BNU7
- H3BP82
- H3BPG5
- H3BRK4
- H3BTC0
- H3BTR6
- H3BTV0
- H3BTY0
- H3BUG0
- H3BUL0
- H3BV80
- Q15287
- NCBI
SMARCD2
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
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- Ensembl
- UniProt
- NCBI
PRPF8
pre-mRNA processing factor 8
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- Ensembl
- UniProt
- NCBI
EFTUD2
elongation factor Tu GTP binding domain containing 2
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- Ensembl
- UniProt
- NCBI
SF3B2
splicing factor 3b subunit 2
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- Ensembl
- UniProt
- NCBI
U2AF2
U2 small nuclear RNA auxiliary factor 2
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- Ensembl
- UniProt
- NCBI
TRA2B
transformer 2 beta homolog
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- Ensembl
- UniProt
- NCBI
PPIL3
peptidylprolyl isomerase like 3
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- Ensembl
- UniProt
- NCBI
PRPF31
pre-mRNA processing factor 31
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- Ensembl
- UniProt
- NCBI
RBM39
RNA binding motif protein 39
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- Ensembl
- UniProt
- A0A087X122
- A0A0U1RQH7
- A0A0U1RQW2
- A8MYG5
- F2Z2Z5
- F2Z3E6
- F8WF24
- F8WF73
- G3XAC6
- H0Y4X3
- H0Y6I9
- H7BZG3
- Q14498
- Q5QP22
- Q5QP23
- NCBI
USP39
ubiquitin specific peptidase 39
- Use as query
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- Ensembl
- UniProt
- NCBI
SRSF7
serine and arginine rich splicing factor 7
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- Add to current query
- Ensembl
- UniProt
- NCBI
SMARCD3
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
- Use as query
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- Ensembl
- UniProt
- NCBI
BOP1
BOP1 ribosomal biogenesis factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000161265 | ENSG00000161265 | U2 small nuclear RNA auxiliary factor 1 like 4 | ||
| A0A1D5RMU4 K7EJH3 K7EJM7 M0QYK5 M0R1E1 Q8WU68 S4R353 S4R3L8 S4R443 | ||||
| 199746 | ||||
| Spliceosome |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
29
|
DDX39B | ENSG00000198563 | DExD-box helicase 39B | ||
| A0A0A0MT12 F6QYI9 F6R6M7 F6S2B7 F6S4E6 F6SXL5 F6TRA5 F6U6E2 F6UJC5 F6WLT2 H0Y400 H0YCC6 Q13838 Q5STU3 | ||||
| 7919 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
30
|
PRPF4 | ENSG00000136875 | pre-mRNA processing factor 4 | ||
| O43172 | ||||
| 9128 | ||||
| Spliceosome | ||||
23
|
CIAO1 | ENSG00000144021 | cytosolic iron-sulfur assembly component 1 | ||
| O76071 | ||||
| 9391 | ||||
27
|
SRSF3 | ENSG00000112081 | serine and arginine rich splicing factor 3 | ||
| A0A087X2D0 P84103 | ||||
| 6428 | ||||
| Spliceosome | ||||
28
|
CWC22 | ENSG00000163510 | CWC22 spliceosome associated protein homolog | ||
| B7WP74 Q9HCG8 | ||||
| 57703 | ||||
29
|
TRA2A | ENSG00000164548 | transformer 2 alpha homolog | ||
| F8WEH2 Q13595 | ||||
| 29896 | ||||
| Spliceosome | ||||
28
|
SNRNP40 | ENSG00000060688 | small nuclear ribonucleoprotein U5 subunit 40 | ||
| Q96DI7 Q9NSS8 | ||||
| 9410 | ||||
| Spliceosome | ||||
26
|
PPIE | ENSG00000084072 | peptidylprolyl isomerase E | ||
| E9PEQ6 E9PIB0 E9PK21 E9PKY5 E9PMH0 H0YCV4 H0YE31 Q9UNP9 | ||||
| 10450 | ||||
| Spliceosome | ||||
26
|
PRPF6 | ENSG00000101161 | pre-mRNA processing factor 6 | ||
| O94906 | ||||
| 24148 | ||||
| Spliceosome | ||||
28
|
PPIL1 | ENSG00000137168 | peptidylprolyl isomerase like 1 | ||
| Q9Y3C6 | ||||
| 51645 | ||||
| Spliceosome | ||||
29
|
DDX39A | ENSG00000123136 | DExD-box helicase 39A | ||
| A0A0D9SEM9 K7EIL8 K7EL56 K7EN69 K7ENP6 K7EPJ3 K7EQN7 O00148 | ||||
| 10212 | ||||
27
|
LSM3 | ENSG00000170860 | LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| P62310 | ||||
| 27258 | ||||
| RNA degradation Spliceosome | ||||
27
|
SNRNP70 | ENSG00000104852 | small nuclear ribonucleoprotein U1 subunit 70 | ||
| M0QX04 M0QYR1 P08621 | ||||
| 6625 | ||||
| Spliceosome | ||||
27
|
NCBP2 | ENSG00000114503 | nuclear cap binding protein subunit 2 | ||
| B3KSB0 C9JKF4 C9JQX9 F8WE41 P52298 | ||||
| 22916 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
26
|
SNRPD2 | ENSG00000125743 | small nuclear ribonucleoprotein D2 polypeptide | ||
| K7EJB5 K7ERG4 P62316 | ||||
| 6633 | ||||
| Spliceosome | ||||
30
|
CWC15 | ENSG00000150316 | CWC15 spliceosome associated protein homolog | ||
| Q9P013 | ||||
| 51503 | ||||
| Spliceosome | ||||
25
|
RNPS1 | ENSG00000205937 | RNA binding protein with serine rich domain 1 | ||
| H3BMM9 H3BMS0 H3BNI3 H3BNU7 H3BP82 H3BPG5 H3BRK4 H3BTC0 H3BTR6 H3BTV0 H3BTY0 H3BUG0 H3BUL0 H3BV80 Q15287 | ||||
| 10921 | ||||
| RNA transport mRNA surveillance pathway | ||||
16
|
SMARCD2 | ENSG00000108604 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 | ||
| B9EGA3 J3KMX2 J3KT18 J3QQL7 J3QS33 J3QWB6 Q92925 | ||||
| 6603 | ||||
30
|
PRPF8 | ENSG00000174231 | pre-mRNA processing factor 8 | ||
| I3L0J9 I3L1T8 I3L3Z8 Q6P2Q9 | ||||
| 10594 | ||||
| Spliceosome | ||||
26
|
EFTUD2 | ENSG00000108883 | elongation factor Tu GTP binding domain containing 2 | ||
| K7EIT3 K7EIV5 K7EJ74 K7EP67 K7EQ26 K7ERJ5 Q15029 | ||||
| 9343 | ||||
| Spliceosome | ||||
29
|
SF3B2 | ENSG00000087365 | splicing factor 3b subunit 2 | ||
| E9PIL8 E9PJ04 E9PJT3 E9PPJ0 H0YCG1 H0YEX5 Q13435 | ||||
| 10992 | ||||
| Spliceosome | ||||
29
|
U2AF2 | ENSG00000063244 | U2 small nuclear RNA auxiliary factor 2 | ||
| K7ELP8 K7ENG2 M0QYQ9 P26368 | ||||
| 11338 | ||||
| Spliceosome | ||||
28
|
TRA2B | ENSG00000136527 | transformer 2 beta homolog | ||
| H7BXF3 H7C2L4 P62995 | ||||
| 6434 | ||||
| Spliceosome | ||||
28
|
PPIL3 | ENSG00000240344 | peptidylprolyl isomerase like 3 | ||
| B8ZZ77 C9J4N2 C9K058 F8WC82 H7BZ14 Q9H2H8 | ||||
| 53938 | ||||
29
|
PRPF31 | ENSG00000105618 | pre-mRNA processing factor 31 | ||
| E7EN72 E7ESX0 E7EU94 E7EVX8 Q8WWY3 | ||||
| 26121 | ||||
| Spliceosome | ||||
29
|
RBM39 | ENSG00000131051 | RNA binding motif protein 39 | ||
| A0A087X122 A0A0U1RQH7 A0A0U1RQW2 A8MYG5 F2Z2Z5 F2Z3E6 F8WF24 F8WF73 G3XAC6 H0Y4X3 H0Y6I9 H7BZG3 Q14498 Q5QP22 Q5QP23 | ||||
| 9584 | ||||
29
|
USP39 | ENSG00000168883 | ubiquitin specific peptidase 39 | ||
| A0A087WW31 A0A087X1B2 B9A018 C9J0X5 C9JIU2 F8WC91 Q53GS9 | ||||
| 10713 | ||||
| Spliceosome | ||||
29
|
SRSF7 | ENSG00000115875 | serine and arginine rich splicing factor 7 | ||
| A0A0B4J1Z1 C9JAB2 F8WEA1 H7BZZ6 H7C1N1 Q16629 | ||||
| 6432 | ||||
| Spliceosome | ||||
11
|
SMARCD3 | ENSG00000082014 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 | ||
| C9JYI7 F8WBJ3 H7C4E9 Q6STE5 | ||||
| 6604 | ||||
30
|
BOP1 | ENSG00000261236 | BOP1 ribosomal biogenesis factor | ||
| A0A075B729 Q14137 | ||||
| 23246 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
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jSquid_subnetworks.xml | 325.33 KB | |
H.sapiens_subnetwork.tsv | 78.69 KB |