- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000151461
- UPF2 regulator of nonse…
- UPF1
- UPF1 RNA helicase and A…
- 1.000
- PPI
- EIF4G1
- eukaryotic translation …
- 1.000
- PPI
- UPF3B
- UPF3B regulator of nons…
- 1.000
- PPI
- UPF3A
- UPF3A regulator of nons…
- 1.000
- PPI
- RBM8A
- RNA binding motif prote…
- 1.000
- PPI
- EIF4A3
- eukaryotic translation …
- 1.000
- PPI
- EXOSC10
- exosome component 10
- 0.999
- PPI
- MAGOH
- mago homolog, exon junc…
- 0.999
- PPI
- CASC3
- CASC3 exon junction com…
- 0.999
- PPI
- SRRM1
- serine and arginine rep…
- 0.999
- PPI
- NOB1
- NIN1 (RPN12) binding pr…
- 0.999
- PPI
- NOP53
- NOP53 ribosome biogenes…
- 0.998
- PPI
- ETF1
- eukaryotic translation …
- 0.998
- Complex
- MTREX
- Mtr4 exosome RNA helica…
- 0.998
- PPI
- RRP7A
- ribosomal RNA processin…
- 0.997
- PPI
- RNPS1
- RNA binding protein wit…
- 0.996
- PPI
- DCP2
- decapping mRNA 2
- 0.995
- PPI
- RBM28
- RNA binding motif prote…
- 0.993
- Metabolic
- SMG1
- SMG1 nonsense mediated …
- 0.992
- PPI
- STAU1
- staufen double-stranded…
- 0.992
- PPI
- NCBP2
- nuclear cap binding pro…
- 0.990
- Metabolic
- GSPT1
- G1 to S phase transitio…
- 0.989
- Complex
- PABPC1
- poly(A) binding protein…
- 0.989
- PPI
- SMG8
- SMG8 nonsense mediated …
- 0.989
- Complex
- EXOSC2
- exosome component 2
- 0.988
- PPI
- DDX23
- DEAD-box helicase 23
- 0.987
- Metabolic
- GSPT2
- G1 to S phase transitio…
- 0.986
- Complex
- CNOT1
- CCR4-NOT transcription …
- 0.986
- Metabolic
- NKAP
- NFKB activating protein
- 0.986
- Complex
- NOMO1
- NODAL modulator 1
- 0.985
- PPI
ENSG00000151461
UPF2 regulator of nonsense mediated mRNA decay
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- Ensembl
- UniProt
- NCBI
PABPC1
poly(A) binding protein cytoplasmic 1
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- Ensembl
- UniProt
- A0A087WTT1
- E5RFD8
- E5RGC4
- E5RGH3
- E5RH24
- E5RHG7
- E5RJB9
- E5RJM8
- E7EQV3
- E7ERJ7
- H0YAP2
- H0YAR2
- H0YAS6
- H0YAS7
- H0YAW6
- H0YB75
- H0YB86
- H0YBN4
- H0YC10
- P11940
- NCBI
NOP53
NOP53 ribosome biogenesis factor
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- Ensembl
- UniProt
- NCBI
DDX23
DEAD-box helicase 23
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- Ensembl
- UniProt
- NCBI
RBM8A
RNA binding motif protein 8A
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- Ensembl
- UniProt
- NCBI
SRRM1
serine and arginine repetitive matrix 1
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- Ensembl
- UniProt
- NCBI
NCBP2
nuclear cap binding protein subunit 2
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- Ensembl
- UniProt
- NCBI
CNOT1
CCR4-NOT transcription complex subunit 1
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- Ensembl
- UniProt
- NCBI
EIF4G1
eukaryotic translation initiation factor 4 gamma 1
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- Ensembl
- UniProt
- C9J2Z7
- C9J556
- C9J6B6
- C9J987
- C9JF13
- C9JHW9
- C9JIH5
- C9JSU8
- C9JWH7
- C9JWH9
- C9JWW9
- C9K073
- E7EUU4
- E7EX73
- E9PGM1
- F8WB97
- F8WCF2
- H7C044
- H7C0V6
- Q04637
- NCBI
RNPS1
RNA binding protein with serine rich domain 1
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- Ensembl
- UniProt
- H3BMM9
- H3BMS0
- H3BNI3
- H3BNU7
- H3BP82
- H3BPG5
- H3BRK4
- H3BTC0
- H3BTR6
- H3BTV0
- H3BTY0
- H3BUG0
- H3BUL0
- H3BV80
- Q15287
- NCBI
STAU1
staufen double-stranded RNA binding protein 1
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
CASC3
CASC3 exon junction complex subunit
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- Ensembl
- UniProt
- NCBI
EXOSC2
exosome component 2
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- Ensembl
- UniProt
- NCBI
GSPT2
G1 to S phase transition 2
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- Ensembl
- UniProt
- NCBI
RBM28
RNA binding motif protein 28
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- Add to current query
- Ensembl
- UniProt
- NCBI
NKAP
NFKB activating protein
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
UPF3B
UPF3B regulator of nonsense mediated mRNA decay
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- Ensembl
- UniProt
- NCBI
EIF4A3
eukaryotic translation initiation factor 4A3
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- Ensembl
- UniProt
- NCBI
MAGOH
mago homolog, exon junction complex subunit
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- Ensembl
- UniProt
- NCBI
ETF1
eukaryotic translation termination factor 1
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- Ensembl
- UniProt
- NCBI
UPF3A
UPF3A regulator of nonsense mediated mRNA decay
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- Ensembl
- UniProt
- NCBI
EXOSC10
exosome component 10
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
RRP7A
ribosomal RNA processing 7 homolog A
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- Add to current query
- Ensembl
- UniProt
- NCBI
MTREX
Mtr4 exosome RNA helicase
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NOB1
NIN1 (RPN12) binding protein 1 homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
GSPT1
G1 to S phase transition 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
UPF1
UPF1 RNA helicase and ATPase
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SMG8
SMG8 nonsense mediated mRNA decay factor
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase
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- Add to current query
- Ensembl
- UniProt
- NCBI
NOMO1
NODAL modulator 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DCP2
decapping mRNA 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000151461 | ENSG00000151461 | UPF2 regulator of nonsense mediated mRNA decay | ||
| Q9HAU5 | ||||
| 26019 |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
23
|
PABPC1 | ENSG00000070756 | poly(A) binding protein cytoplasmic 1 | ||
| A0A087WTT1 E5RFD8 E5RGC4 E5RGH3 E5RH24 E5RHG7 E5RJB9 E5RJM8 E7EQV3 E7ERJ7 H0YAP2 H0YAR2 H0YAS6 H0YAS7 H0YAW6 H0YB75 H0YB86 H0YBN4 H0YC10 P11940 | ||||
| 26986 | ||||
| RNA degradation RNA transport mRNA surveillance pathway | ||||
21
|
NOP53 | ENSG00000105373 | NOP53 ribosome biogenesis factor | ||
| M0QX73 M0QYZ9 M0QZ34 M0QZU5 Q9NZM5 | ||||
| 29997 | ||||
25
|
DDX23 | ENSG00000174243 | DEAD-box helicase 23 | ||
| F8VVA2 F8W1J5 H0YI52 H0YIL9 Q9BUQ8 | ||||
| 9416 | ||||
| Spliceosome | ||||
21
|
RBM8A | ENSG00000265241 | RNA binding motif protein 8A | ||
| A0A0J9YW13 Q9Y5S9 | ||||
| 9939 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
19
|
SRRM1 | ENSG00000133226 | serine and arginine repetitive matrix 1 | ||
| A9Z1X7 E9PCT1 M0QXG5 M0R088 M0R1E7 Q8IYB3 | ||||
| 10250 | ||||
| RNA transport mRNA surveillance pathway | ||||
22
|
NCBP2 | ENSG00000114503 | nuclear cap binding protein subunit 2 | ||
| B3KSB0 C9JKF4 C9JQX9 F8WE41 P52298 | ||||
| 22916 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
14
|
CNOT1 | ENSG00000125107 | CCR4-NOT transcription complex subunit 1 | ||
| A5YKK6 H3BMH0 H3BMZ2 H3BNB1 H3BPF1 H3BR89 H3BT18 H3BTH2 H3BU44 H3BVC9 | ||||
| 23019 | ||||
| RNA degradation | ||||
13
|
EIF4G1 | ENSG00000114867 | eukaryotic translation initiation factor 4 gamma 1 | ||
| C9J2Z7 C9J556 C9J6B6 C9J987 C9JF13 C9JHW9 C9JIH5 C9JSU8 C9JWH7 C9JWH9 C9JWW9 C9K073 E7EUU4 E7EX73 E9PGM1 F8WB97 F8WCF2 H7C044 H7C0V6 Q04637 | ||||
| 1981 | ||||
| RNA transport | ||||
20
|
RNPS1 | ENSG00000205937 | RNA binding protein with serine rich domain 1 | ||
| H3BMM9 H3BMS0 H3BNI3 H3BNU7 H3BP82 H3BPG5 H3BRK4 H3BTC0 H3BTR6 H3BTV0 H3BTY0 H3BUG0 H3BUL0 H3BV80 Q15287 | ||||
| 10921 | ||||
| RNA transport mRNA surveillance pathway | ||||
10
|
STAU1 | ENSG00000124214 | staufen double-stranded RNA binding protein 1 | ||
| A0A087X1A5 F6UDC6 O95793 Q5JW28 Q5JW30 | ||||
| 6780 | ||||
13
|
CASC3 | ENSG00000108349 | CASC3 exon junction complex subunit | ||
| J3KSY7 J3QSC4 K7EQ38 O15234 | ||||
| 22794 | ||||
| RNA transport mRNA surveillance pathway | ||||
23
|
EXOSC2 | ENSG00000130713 | exosome component 2 | ||
| A3KFL1 A3KFL2 A3KFL5 Q13868 | ||||
| 23404 | ||||
| RNA degradation | ||||
17
|
GSPT2 | ENSG00000189369 | G1 to S phase transition 2 | ||
| Q8IYD1 | ||||
| 23708 | ||||
| mRNA surveillance pathway | ||||
25
|
RBM28 | ENSG00000106344 | RNA binding motif protein 28 | ||
| C9JAA9 C9JE21 H7C5G8 Q9NW13 | ||||
| 55131 | ||||
| Ribosome biogenesis in eukaryotes | ||||
15
|
NKAP | ENSG00000101882 | NFKB activating protein | ||
| A0A494C050 Q8N5F7 | ||||
| 79576 | ||||
22
|
UPF3B | ENSG00000125351 | UPF3B regulator of nonsense mediated mRNA decay | ||
| A0A087WYC8 A0A1B0GVA2 Q9BZI7 | ||||
| 65109 | ||||
| RNA transport mRNA surveillance pathway | ||||
27
|
EIF4A3 | ENSG00000141543 | eukaryotic translation initiation factor 4A3 | ||
| I3L3H2 P38919 | ||||
| 9775 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
26
|
MAGOH | ENSG00000162385 | mago homolog, exon junction complex subunit | ||
| P61326 | ||||
| 4116 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
20
|
ETF1 | ENSG00000120705 | eukaryotic translation termination factor 1 | ||
| B7Z7P8 D6RCB3 D6RJE8 I3L492 P62495 | ||||
| 2107 | ||||
| mRNA surveillance pathway | ||||
19
|
UPF3A | ENSG00000169062 | UPF3A regulator of nonsense mediated mRNA decay | ||
| A0A087WZ33 Q9H1J1 | ||||
| 65110 | ||||
| RNA transport mRNA surveillance pathway | ||||
22
|
EXOSC10 | ENSG00000171824 | exosome component 10 | ||
| K7EJ37 Q01780 | ||||
| 5394 | ||||
| RNA degradation | ||||
13
|
RRP7A | ENSG00000189306 | ribosomal RNA processing 7 homolog A | ||
| F8WAT7 Q9Y3A4 | ||||
| 27341 | ||||
| Ribosome biogenesis in eukaryotes | ||||
22
|
MTREX | ENSG00000039123 | Mtr4 exosome RNA helicase | ||
| D6REC7 H0Y8U3 H0YAC4 P42285 | ||||
| 23517 | ||||
| RNA degradation | ||||
22
|
NOB1 | ENSG00000141101 | NIN1 (RPN12) binding protein 1 homolog | ||
| H3BUR4 Q9ULX3 | ||||
| 28987 | ||||
| Ribosome biogenesis in eukaryotes | ||||
15
|
GSPT1 | ENSG00000103342 | G1 to S phase transition 1 | ||
| H3BMT9 H3BR35 H3BSV8 P15170 | ||||
| 2935 | ||||
| mRNA surveillance pathway | ||||
29
|
UPF1 | ENSG00000005007 | UPF1 RNA helicase and ATPase | ||
| Q92900 | ||||
| 5976 | ||||
| RNA transport mRNA surveillance pathway | ||||
7
|
SMG8 | ENSG00000167447 | SMG8 nonsense mediated mRNA decay factor | ||
| J3KTD7 J3QKP6 Q8ND04 | ||||
| 55181 | ||||
14
|
SMG1 | ENSG00000157106 | SMG1 nonsense mediated mRNA decay associated PI3K related kinase | ||
| A0A087WXM7 A0A087X1K8 E9PNP6 H3BPS6 H3BQN7 H3BR09 I3L0W2 I3L144 I3L400 J3KRA9 Q96Q15 | ||||
| 23049 | ||||
| mRNA surveillance pathway | ||||
2
|
NOMO1 | ENSG00000103512 | NODAL modulator 1 | ||
| A0A087WW46 A0A087X117 H3BUC9 Q15155 | ||||
| 23420 | ||||
5
|
DCP2 | ENSG00000172795 | decapping mRNA 2 | ||
| D6RCL0 H0Y9T5 Q8IU60 | ||||
| 167227 | ||||
| RNA degradation |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
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jSquid_subnetworks.xml | 311.60 KB | |
H.sapiens_subnetwork.tsv | 51.62 KB |