Found 1 of 1 query genes

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Query interactions

Interaction partners
Confidence
Network
MEX
PIN
SCL
PHP
MIR
TFB
PEX
GIN
DOM
QMS
GRG
Evidence types
HSA
MMU
RNO
CFA
GGA
DRE
CIN
DME
CEL
BTA
SCE
ATH
SPO
BSU
ECO
PFA
DDI
SSO
SSC
MJA
OSA
Species
In Gold st.

ID Query gene
ID Query ortholog

Log-likelihood ratio (LLR)
	Highly positive
	Positive
	Zero
	Negative
	Highly negative
Known coupling
	This network
	Other network

2. ENSG00000149179
3. chromosome 11 open read…
- 2. NICN1
  3. nicolin 1
  4. 0.960
  5. PPI
- 2. TTLL1
  3. tubulin tyrosine ligase…
  4. 0.925
  5. PPI
- 2. TPGS2
  3. tubulin polyglutamylase…
  4. 0.896
  5. PPI
- 2. CDC16
  3. cell division cycle 16
  4. 0.885
  5. PPI
- 2. EIF3F
  3. eukaryotic translation …
  4. 0.833
  5. PPI
- 2. RPS3A
  3. ribosomal protein S3A
  4. 0.819
  5. PPI
- 2. RAB29
  3. RAB29, member RAS oncog…
  4. 0.786
  5. PPI
- 2. BTRC
  3. beta-transducin repeat …
  4. 0.709
  5. PPI
- 2. PRKACB
  3. protein kinase cAMP-act…
  4. 0.706
  5. PPI
- 2. PCM1
  3. pericentriolar material…
  4. 0.684
  5. PPI
- 2. PSMA1
  3. proteasome 20S subunit …
  4. 0.668
  5. PPI
- 2. CEP290
  3. centrosomal protein 290
  4. 0.649
  5. PPI
- 2. GSR
  3. glutathione-disulfide r…
  4. 0.575
  5. PPI
- 2. UBQLN4
  3. ubiquilin 4
  4. 0.484
  5. PPI

Subnetwork gene interactions

ENSG00000149179

chromosome 11 open reading frame 49

FunCoup

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Ensembl

ENSG00000149179

UniProt

NCBI

79096

PSMA1

proteasome 20S subunit alpha 1

FunCoup

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Ensembl

ENSG00000129084

UniProt

NCBI

5682

UBQLN4

ubiquilin 4

FunCoup

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Ensembl

ENSG00000160803

UniProt

Q9NRR5

NCBI

56893

BTRC

beta-transducin repeat containing E3 ubiquitin protein ligase

FunCoup

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Ensembl

ENSG00000166167

UniProt

NCBI

8945

TTLL1

tubulin tyrosine ligase like 1

FunCoup

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Ensembl

ENSG00000100271

UniProt

O95922

NCBI

25809

EIF3F

eukaryotic translation initiation factor 3 subunit F

FunCoup

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Ensembl

ENSG00000175390

UniProt

NCBI

8665

CDC16

cell division cycle 16

FunCoup

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Ensembl

ENSG00000130177

UniProt

NCBI

8881

CEP290

centrosomal protein 290

FunCoup

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Ensembl

ENSG00000198707

UniProt

NCBI

80184

PCM1

pericentriolar material 1

FunCoup

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Ensembl

ENSG00000078674

UniProt

NCBI

5108

RPS3A

ribosomal protein S3A

FunCoup

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Ensembl

ENSG00000145425

UniProt

NCBI

6189

RAB29

RAB29, member RAS oncogene family

FunCoup

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Ensembl

ENSG00000117280

UniProt

NCBI

8934

TPGS2

tubulin polyglutamylase complex subunit 2

FunCoup

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Ensembl

ENSG00000134779

UniProt

NCBI

25941

PRKACB

protein kinase cAMP-activated catalytic subunit beta

FunCoup

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Ensembl

ENSG00000142875

UniProt

NCBI

5567

NICN1

nicolin 1

FunCoup

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Ensembl

ENSG00000145029

UniProt

NCBI

84276

GSR

glutathione-disulfide reductase

FunCoup

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Ensembl

ENSG00000104687

UniProt

NCBI

2936

Query genes

		Identifier	Description
14	ENSG00000149179	ENSG00000149179	chromosome 11 open reading frame 49
		UniProt	E9PI12 E9PI28 E9PQA0 E9PQS2 H0YDE7 H0YDJ0 Q9H6J7
		NCBI	79096

Subnetwork genes

		Identifier	Description
6	PSMA1	ENSG00000129084	proteasome 20S subunit alpha 1
		UniProt	F5GX11 F5H112 P25786
		NCBI	5682
		KEGG metabolic	Proteasome
4	UBQLN4	ENSG00000160803	ubiquilin 4
		UniProt	Q9NRR5
		NCBI	56893
		KEGG metabolic	Protein processing in endoplasmic reticulum
1	BTRC	ENSG00000166167	beta-transducin repeat containing E3 ubiquitin protein ligase
		UniProt	B7Z3H4 Q5T1W7 Q9Y297
		NCBI	8945
		KEGG signaling	Oocyte meiosis Wnt signaling pathway Hedgehog signaling pathway Hippo signaling pathway
		KEGG metabolic	Ubiquitin mediated proteolysis
4	TTLL1	ENSG00000100271	tubulin tyrosine ligase like 1
		UniProt	O95922
		NCBI	25809
3	EIF3F	ENSG00000175390	eukaryotic translation initiation factor 3 subunit F
		UniProt	A0A1W2PP79 E9PQV8 H0YDT6 O00303
		NCBI	8665
		KEGG metabolic	RNA transport
5	CDC16	ENSG00000130177	cell division cycle 16
		UniProt	A0A3B3ISD2 Q13042 Q5T8C6
		NCBI	8881
		KEGG signaling	Oocyte meiosis Cell cycle Progesterone-mediated oocyte maturation
		KEGG metabolic	Ubiquitin mediated proteolysis
2	CEP290	ENSG00000198707	centrosomal protein 290
		UniProt	A0A0A0MS86 A0A5F9ZHU6 A0A5F9ZHV7 A0A5K1VW81 F8VS29 F8W097 F8W0V9 J3KNF5 O15078 S4R322
		NCBI	80184
2	PCM1	ENSG00000078674	pericentriolar material 1
		UniProt	A0A4W8VX11 A0A5H1ZRS1 E5RGQ4 E7EV93 E9PGW9 H0YBA1 Q15154
		NCBI	5108
5	RPS3A	ENSG00000145425	ribosomal protein S3A
		UniProt	D6R9B6 D6RAS7 D6RAT0 D6RB09 D6RED7 D6RG13 D6RGE0 D6RI02 E9PFI5 H0Y8L7 H0Y9Y4 P61247
		NCBI	6189
		KEGG metabolic	Ribosome
1	RAB29	ENSG00000117280	RAB29, member RAS oncogene family
		UniProt	E9PL56 O14966
		NCBI	8934
3	TPGS2	ENSG00000134779	tubulin polyglutamylase complex subunit 2
		UniProt	A0A087WUC8 A0A087WV06 A0A087WZ07 A0A087X0Q8 A0A087X1R7 K7EJA6 K7EK44 K7EKC0 K7ELA6 K7EN50 K7ENZ9 K7EP30 K7ERK3 Q68CL5
		NCBI	25941
1	PRKACB	ENSG00000142875	protein kinase cAMP-activated catalytic subunit beta
		UniProt	A0A087WVC4 A0A0A0MS54 B1APF7 B1APF8 B1APF9 B1APG0 B1APG1 B1APG2 B1APG3 P22694
		NCBI	5567
		KEGG signaling	Thyroid hormone signaling pathway Hedgehog signaling pathway Calcium signaling pathway Adrenergic signaling in cardiomyocytes Chemokine signaling pathway Taste transduction Long-term potentiation Olfactory transduction cAMP signaling pathway Gap junction Dopaminergic synapse Relaxin signaling pathway GABAergic synapse Serotonergic synapse Cholinergic synapse Glutamatergic synapse Glucagon signaling pathway Oxytocin signaling pathway Retrograde endocannabinoid signaling MAPK signaling pathway Apelin signaling pathway Vascular smooth muscle contraction Oocyte meiosis Ras signaling pathway Tight junction Wnt signaling pathway Melanogenesis Estrogen signaling pathway Progesterone-mediated oocyte maturation GnRH signaling pathway Insulin signaling pathway
		KEGG metabolic	Autophagy - animal
2	NICN1	ENSG00000145029	nicolin 1
		UniProt	B4DX77 Q9BSH3
		NCBI	84276
1	GSR	ENSG00000104687	glutathione-disulfide reductase
		UniProt	A0A2R8YF59 H0YC68 P00390
		NCBI	2936
		KEGG metabolic	Glutathione metabolism

Enrichment analysis

Search for enrichment of pathways or functional gene sets for your subnetwork genes

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	jSquid_subnetworks.xml	135.78 KB
	H.sapiens_subnetwork.tsv	4.90 KB

Species:

Network information:

Filter Results:

Network appearance:

ENSG00000149179

PSMA1

UBQLN4

BTRC

TTLL1

EIF3F

CDC16

CEP290

PCM1

RPS3A

RAB29

TPGS2

PRKACB

NICN1

GSR

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