Found 1 of 1 query genes

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Query interactions

Interaction partners
Confidence
Network
MEX
PIN
SCL
PHP
MIR
TFB
PEX
GIN
DOM
QMS
GRG
Evidence types
HSA
MMU
RNO
CFA
GGA
DRE
CIN
DME
CEL
BTA
SCE
ATH
SPO
BSU
ECO
PFA
DDI
SSO
SSC
MJA
OSA
Species
In Gold st.

ID Query gene
ID Query ortholog

Log-likelihood ratio (LLR)
	Highly positive
	Positive
	Zero
	Negative
	Highly negative
Known coupling
	This network
	Other network

2. ENSG00000148690
3. FRA10A associated CGG r…
- 2. PRPF40A
  3. pre-mRNA processing fac…
  4. 0.999
  5. PPI
- 2. U2AF1 (1 of 2)
  3. U2 small nuclear RNA au…
  4. 0.998
  5. PPI
- 2. IK
  3. IK cytokine
  4. 0.998
  5. PPI
- 2. SF3B2
  3. splicing factor 3b subu…
  4. 0.992
  5. PPI
- 2. NKAP
  3. NFKB activating protein
  4. 0.992
  5. PPI
- 2. THOC1
  3. THO complex 1
  4. 0.991
  5. PPI
- 2. PRPF3
  3. pre-mRNA processing fac…
  4. 0.990
  5. PPI
- 2. TTC14
  3. tetratricopeptide repea…
  4. 0.989
  5. PPI
- 2. ZCCHC10
  3. zinc finger CCHC-type c…
  4. 0.987
  5. PPI
- 2. CHERP
  3. calcium homeostasis end…
  4. 0.986
  5. PPI
- 2. C7orf25
  3. chromosome 7 open readi…
  4. 0.984
  5. PPI
- 2. CWC27
  3. CWC27 spliceosome assoc…
  4. 0.980
  5. PPI
- 2. SMARCB1
  3. SWI/SNF related, matrix…
  4. 0.978
  5. PPI
- 2. WASF3
  3. WASP family member 3
  4. 0.976
  5. PPI
- 2. MFAP1
  3. microfibril associated …
  4. 0.971
  5. PPI
- 2. MPHOSPH8
  3. M-phase phosphoprotein 8
  4. 0.963
  5. PPI
- 2. XPO1
  3. exportin 1
  4. 0.946
  5. PPI
- 2. ESS2
  3. ess-2 splicing factor h…
  4. 0.927
  5. PPI
- 2. ZNF830
  3. zinc finger protein 830
  4. 0.923
  5. PPI
- 2. VPS29
  3. VPS29 retromer complex …
  4. 0.908
  5. PPI
- 2. SAP30BP
  3. SAP30 binding protein
  4. 0.787
  5. PPI
- 2. HABP4
  3. hyaluronan binding prot…
  4. 0.772
  5. PPI
- 2. TRIM41
  3. tripartite motif contai…
  4. 0.671
  5. PPI
- 2. U2AF1 (2 of 2)
  3. U2 small nuclear RNA au…
  4. 0.633
  5. PPI
- 2. MAP3K12
  3. mitogen-activated prote…
  4. 0.617
  5. PPI
- 2. RFC1
  3. replication factor C su…
  4. 0.611
  5. Metabolic
- 2. SET
  3. SET nuclear proto-oncog…
  4. 0.603
  5. Metabolic
- 2. PNN
  3. pinin, desmosome associ…
  4. 0.596
  5. Complex
- 2. KIN
  3. Kin17 DNA and RNA bindi…
  4. 0.587
  5. Metabolic
- 2. ISY1
  3. ISY1 splicing factor ho…
  4. 0.558
  5. Metabolic

Subnetwork gene interactions

ENSG00000148690

FRA10A associated CGG repeat 1

FunCoup

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Ensembl

ENSG00000148690

UniProt

Q70Z53

NCBI

118924

TTC14

tetratricopeptide repeat domain 14

FunCoup

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Ensembl

ENSG00000163728

UniProt

NCBI

151613

SF3B2

splicing factor 3b subunit 2

FunCoup

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Ensembl

ENSG00000087365

UniProt

NCBI

10992

U2AF1 (1 of 2)

U2 small nuclear RNA auxiliary factor 1

FunCoup

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Ensembl

ENSG00000160201

UniProt

NCBI

CWC27

CWC27 spliceosome associated cyclophilin

FunCoup

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Ensembl

ENSG00000153015

UniProt

NCBI

10283

ESS2

ess-2 splicing factor homolog

FunCoup

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Ensembl

ENSG00000100056

UniProt

NCBI

8220

PRPF40A

pre-mRNA processing factor 40 homolog A

FunCoup

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Ensembl

ENSG00000196504

UniProt

NCBI

55660

CHERP

calcium homeostasis endoplasmic reticulum protein

FunCoup

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Ensembl

ENSG00000085872

UniProt

NCBI

10523

ZCCHC10

zinc finger CCHC-type containing 10

FunCoup

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Ensembl

ENSG00000155329

UniProt

NCBI

54819

IK

IK cytokine

FunCoup

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Ensembl

ENSG00000113141

UniProt

NCBI

3550

ISY1

ISY1 splicing factor homolog

FunCoup

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Ensembl

ENSG00000240682

UniProt

NCBI

PNN

pinin, desmosome associated protein

FunCoup

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Ensembl

ENSG00000100941

UniProt

NCBI

5411

KIN

Kin17 DNA and RNA binding protein

FunCoup

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Ensembl

ENSG00000151657

UniProt

NCBI

22944

SMARCB1

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1

FunCoup

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Ensembl

ENSG00000099956

UniProt

NCBI

6598

ZNF830

zinc finger protein 830

FunCoup

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Ensembl

ENSG00000198783

UniProt

NCBI

91603

C7orf25

chromosome 7 open reading frame 25

FunCoup

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Ensembl

ENSG00000136197

UniProt

NCBI

79020

SET

SET nuclear proto-oncogene

FunCoup

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Ensembl

ENSG00000119335

UniProt

NCBI

6418

XPO1

exportin 1

FunCoup

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Ensembl

ENSG00000082898

UniProt

NCBI

7514

THOC1

THO complex 1

FunCoup

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Ensembl

ENSG00000079134

UniProt

NCBI

9984

PRPF3

pre-mRNA processing factor 3

FunCoup

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Ensembl

ENSG00000117360

UniProt

O43395

NCBI

9129

RFC1

replication factor C subunit 1

FunCoup

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Ensembl

ENSG00000035928

UniProt

NCBI

5981

NKAP

NFKB activating protein

FunCoup

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Ensembl

ENSG00000101882

UniProt

NCBI

79576

VPS29

VPS29 retromer complex component

FunCoup

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Ensembl

ENSG00000111237

UniProt

NCBI

51699

HABP4

hyaluronan binding protein 4

FunCoup

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Ensembl

ENSG00000130956

UniProt

Q5JVS0

NCBI

22927

MFAP1

microfibril associated protein 1

FunCoup

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Ensembl

ENSG00000140259

UniProt

P55081

NCBI

4236

MPHOSPH8

M-phase phosphoprotein 8

FunCoup

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Ensembl

ENSG00000196199

UniProt

NCBI

54737

SAP30BP

SAP30 binding protein

FunCoup

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Ensembl

ENSG00000161526

UniProt

NCBI

29115

U2AF1 (2 of 2)

U2 small nuclear RNA auxiliary factor 1 like 5

FunCoup

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Ensembl

ENSG00000275895

UniProt

NCBI

MAP3K12

mitogen-activated protein kinase kinase kinase 12

FunCoup

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Ensembl

ENSG00000139625

UniProt

NCBI

7786

TRIM41

tripartite motif containing 41

FunCoup

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Ensembl

ENSG00000146063

UniProt

NCBI

90933

WASF3

WASP family member 3

FunCoup

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Ensembl

ENSG00000132970

UniProt

NCBI

10810

Query genes

		Identifier	Description
30	ENSG00000148690	ENSG00000148690	FRA10A associated CGG repeat 1
		UniProt	Q70Z53
		NCBI	118924

Subnetwork genes

		Identifier	Description
8	TTC14	ENSG00000163728	tetratricopeptide repeat domain 14
		UniProt	C9J974 C9JBA2 C9JCY7 F8WDA3 F8WDH5 Q96N46
		NCBI	151613
23	SF3B2	ENSG00000087365	splicing factor 3b subunit 2
		UniProt	E9PIL8 E9PJ04 E9PJT3 E9PPJ0 H0YCG1 H0YEX5 Q13435
		NCBI	10992
		KEGG metabolic	Spliceosome
20	U2AF1 (1 of 2)	ENSG00000160201	U2 small nuclear RNA auxiliary factor 1
		UniProt	A0A1B0GW87 Q01081
		NCBI	102724594 7307
		KEGG metabolic	Spliceosome
15	CWC27	ENSG00000153015	CWC27 spliceosome associated cyclophilin
		UniProt	D6REK3 Q6UX04
		NCBI	10283
11	ESS2	ENSG00000100056	ess-2 splicing factor homolog
		UniProt	F8WEF8 Q96DF8
		NCBI	8220
20	PRPF40A	ENSG00000196504	pre-mRNA processing factor 40 homolog A
		UniProt	A0A3F2YNY6 F5H578 H0YG38 H7BXZ7 H7C2N3 O75400
		NCBI	55660
		KEGG metabolic	Spliceosome
14	CHERP	ENSG00000085872	calcium homeostasis endoplasmic reticulum protein
		UniProt	J3QK89 Q8IWX8
		NCBI	10523
		KEGG metabolic	Spliceosome
9	ZCCHC10	ENSG00000155329	zinc finger CCHC-type containing 10
		UniProt	B3KVL5 D6R9G7 D6RHC2 D6RIV3 G3XAM1 Q8TBK6
		NCBI	54819
19	IK	ENSG00000113141	IK cytokine
		UniProt	A0A0C4DGW5 D6RAH1 D6RAY9 D6RCQ4 D6REL4 E7EQZ7 Q13123
		NCBI	3550
20	ISY1	ENSG00000240682	ISY1 splicing factor homolog
		UniProt	A8MVI5 D6RC18 H0YA89 Q9ULR0
		NCBI	100534599 57461
		KEGG metabolic	Spliceosome
18	PNN	ENSG00000100941	pinin, desmosome associated protein
		UniProt	G3V579 G3V5F0 Q9H307
		NCBI	5411
		KEGG metabolic	RNA transport mRNA surveillance pathway
19	KIN	ENSG00000151657	Kin17 DNA and RNA binding protein
		UniProt	O60870 S4R357
		NCBI	22944
8	SMARCB1	ENSG00000099956	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
		UniProt	A0A0G2JRV3 A0A0U1RQQ2 A0A0U1RRB8 A0A2R8Y5N5 A0A2R8Y5Z2 A0A2R8YDN6 A0A2R8YEE8 B5MCL5 C9JTA6 G5E975 Q12824
		NCBI	6598
11	ZNF830	ENSG00000198783	zinc finger protein 830
		UniProt	J3QQQ3 Q96NB3
		NCBI	91603
3	C7orf25	ENSG00000136197	chromosome 7 open reading frame 25
		UniProt	C9JF90 C9K0L6 Q9BPX7
		NCBI	79020
17	SET	ENSG00000119335	SET nuclear proto-oncogene
		UniProt	A0A0C4DFV9 B2REB7 Q01105
		NCBI	6418
15	XPO1	ENSG00000082898	exportin 1
		UniProt	C9IYM2 C9IZS4 C9J673 C9JF49 C9JKM9 C9JQ02 C9JV99 F8WF71 H7BZC5 O14980
		NCBI	7514
		KEGG metabolic	Ribosome biogenesis in eukaryotes RNA transport
16	THOC1	ENSG00000079134	THO complex 1
		UniProt	A0A087WWS1 A0A087WY84 J3KRD7 J3KT14 J3QQZ3 Q96FV9 R4GMN4 R4GN58
		NCBI	9984
		KEGG metabolic	Spliceosome RNA transport
22	PRPF3	ENSG00000117360	pre-mRNA processing factor 3
		UniProt	O43395
		NCBI	9129
		KEGG metabolic	Spliceosome
20	RFC1	ENSG00000035928	replication factor C subunit 1
		UniProt	A0A1W2PP02 D6RAD2 E0CX09 H0Y8U4 H0Y9P8 P35251
		NCBI	5981
		KEGG metabolic	DNA replication Mismatch repair Nucleotide excision repair
16	NKAP	ENSG00000101882	NFKB activating protein
		UniProt	A0A494C050 Q8N5F7
		NCBI	79576
6	VPS29	ENSG00000111237	VPS29 retromer complex component
		UniProt	F8VXU5 Q05DG7 Q9UBQ0
		NCBI	51699
		KEGG metabolic	Endocytosis
2	HABP4	ENSG00000130956	hyaluronan binding protein 4
		UniProt	Q5JVS0
		NCBI	22927
18	MFAP1	ENSG00000140259	microfibril associated protein 1
		UniProt	P55081
		NCBI	4236
1	MPHOSPH8	ENSG00000196199	M-phase phosphoprotein 8
		UniProt	A0A0A0MT47 H0Y6J1 Q99549
		NCBI	54737
4	SAP30BP	ENSG00000161526	SAP30 binding protein
		UniProt	F5H478 J3KRR6 J3KRU5 J3KS14 J3QKW0 J3QLH3 J3QLM2 J3QQJ0 J3QS04 Q9UHR5 X6R3T8
		NCBI	29115
8	U2AF1 (2 of 2)	ENSG00000275895	U2 small nuclear RNA auxiliary factor 1 like 5
		UniProt	A0A1B0GW87 P0DN76
		NCBI	102724594 7307
		KEGG metabolic	Spliceosome
1	MAP3K12	ENSG00000139625	mitogen-activated protein kinase kinase kinase 12
		UniProt	F8VUG4 H3BMF0 Q12852
		NCBI	7786
		KEGG signaling	MAPK signaling pathway
3	TRIM41	ENSG00000146063	tripartite motif containing 41
		UniProt	D6REK2 H0Y9T3 H0YAD6 Q8WV44
		NCBI	90933
1	WASF3	ENSG00000132970	WASP family member 3
		UniProt	A0A590UJ74 Q9UPY6
		NCBI	10810
		KEGG signaling	Fc gamma R-mediated phagocytosis Adherens junction

Enrichment analysis

Search for enrichment of pathways or functional gene sets for your subnetwork genes

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	jSquid_subnetworks.xml	287.61 KB
	H.sapiens_subnetwork.tsv	35.27 KB

Species:

Network information:

Filter Results:

Network appearance:

ENSG00000148690

TTC14

SF3B2

U2AF1 (1 of 2)

CWC27

ESS2

PRPF40A

CHERP

ZCCHC10

IK

ISY1

PNN

KIN

SMARCB1

ZNF830

C7orf25

SET

XPO1

THOC1

PRPF3

RFC1

NKAP

VPS29

HABP4

MFAP1

MPHOSPH8

SAP30BP

U2AF1 (2 of 2)

MAP3K12

TRIM41

WASF3

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