Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000136451
- vascular endothelial zi…
- SCAF8
- SR-related CTD associat…
- 0.664
- Complex
- RBM5
- RNA binding motif prote…
- 0.524
- Complex
- PUM1
- pumilio RNA binding fam…
- 0.486
- Complex
- MEOX2
- mesenchyme homeobox 2
- 0.486
- PPI
- U2SURP
- U2 snRNP associated SUR…
- 0.484
- Complex
- RRN3
- RRN3 homolog, RNA polym…
- 0.466
- Complex
- CDK13
- cyclin dependent kinase…
- 0.406
- Complex
- ESF1
- ESF1 nucleolar pre-rRNA…
- 0.403
- Complex
- RBM39
- RNA binding motif prote…
- 0.402
- Complex
Subnetwork gene interactions
ENSG00000136451
vascular endothelial zinc finger 1
FunCoup
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- Ensembl
- UniProt
- NCBI
RBM39
RNA binding motif protein 39
FunCoup
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- Ensembl
- UniProt
- A0A087X122
- A0A0U1RQH7
- A0A0U1RQW2
- A8MYG5
- F2Z2Z5
- F2Z3E6
- F8WF24
- F8WF73
- G3XAC6
- H0Y4X3
- H0Y6I9
- H7BZG3
- Q14498
- Q5QP22
- Q5QP23
- NCBI
U2SURP
U2 snRNP associated SURP domain containing
FunCoup
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- Ensembl
- UniProt
- NCBI
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog
FunCoup
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- Ensembl
- UniProt
- NCBI
PUM1
pumilio RNA binding family member 1
FunCoup
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- Ensembl
- UniProt
- NCBI
SCAF8
SR-related CTD associated factor 8
FunCoup
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- Ensembl
- UniProt
- NCBI
RRN3
RRN3 homolog, RNA polymerase I transcription factor
FunCoup
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- Ensembl
- UniProt
- NCBI
RBM5
RNA binding motif protein 5
FunCoup
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- Ensembl
- UniProt
- NCBI
CDK13
cyclin dependent kinase 13
FunCoup
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- Ensembl
- UniProt
- A0A087X209
- A0A2R8Y4Z0
- A0A2R8Y644
- A0A2R8Y7W5
- A0A2R8Y7Y0
- A0A2R8YCQ1
- A0A2R8YD28
- A0A2R8YEB7
- A0A2R8YF61
- A0A2R8YFE7
- Q14004
- Q9BVE2
- NCBI
MEOX2
mesenchyme homeobox 2
FunCoup
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
Query genes
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
8
|
RBM39 | ENSG00000131051 | RNA binding motif protein 39 | ||
| A0A087X122 A0A0U1RQH7 A0A0U1RQW2 A8MYG5 F2Z2Z5 F2Z3E6 F8WF24 F8WF73 G3XAC6 H0Y4X3 H0Y6I9 H7BZG3 Q14498 Q5QP22 Q5QP23 | ||||
| 9584 | ||||
8
|
U2SURP | ENSG00000163714 | U2 snRNP associated SURP domain containing | ||
| C9J5L1 C9JDJ7 E7ET15 E7EW00 H0Y8D9 H7C4V2 O15042 U3KPT1 | ||||
| 23350 | ||||
| Spliceosome | ||||
6
|
ESF1 | ENSG00000089048 | ESF1 nucleolar pre-rRNA processing protein homolog | ||
| A0A087WX71 Q9H501 | ||||
| 51575 | ||||
7
|
PUM1 | ENSG00000134644 | pumilio RNA binding family member 1 | ||
| E9PL65 E9PM68 E9PMX1 E9PR38 H0YC97 H0YCK1 H0YDC5 H0YDK8 H0YDQ6 H0YED4 H0YEH2 Q14671 Q5T1Z4 Q5T1Z8 | ||||
| 9698 | ||||
7
|
SCAF8 | ENSG00000213079 | SR-related CTD associated factor 8 | ||
| A0A0A0MT33 Q9UPN6 | ||||
| 22828 | ||||
7
|
RRN3 | ENSG00000085721 | RRN3 homolog, RNA polymerase I transcription factor | ||
| F5H148 H3BMT1 Q9NYV6 | ||||
| 54700 | ||||
7
|
RBM5 | ENSG00000003756 | RNA binding motif protein 5 | ||
| C9J9P7 C9JFQ5 C9JR02 F8W910 F8WE23 H7BYM9 P52756 | ||||
| 10181 | ||||
4
|
CDK13 | ENSG00000065883 | cyclin dependent kinase 13 | ||
| A0A087X209 A0A2R8Y4Z0 A0A2R8Y644 A0A2R8Y7W5 A0A2R8Y7Y0 A0A2R8YCQ1 A0A2R8YD28 A0A2R8YEB7 A0A2R8YF61 A0A2R8YFE7 Q14004 Q9BVE2 | ||||
| 8621 | ||||
1
|
MEOX2 | ENSG00000106511 | mesenchyme homeobox 2 | ||
| P50222 | ||||
| 4223 |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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Copied subnetwork genes to clipboard
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jSquid_subnetworks.xml | 110.63 KB | |
H.sapiens_subnetwork.tsv | 6.14 KB |