- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000130520
- LSM4 homolog, U6 small …
- LSM7
- LSM7 homolog, U6 small …
- 1.000
- PPI
- LSM2
- LSM2 homolog, U6 small …
- 1.000
- PPI
- LSM1
- LSM1 homolog, mRNA degr…
- 1.000
- PPI
- LSM6
- LSM6 homolog, U6 small …
- 1.000
- PPI
- LSM3
- LSM3 homolog, U6 small …
- 1.000
- PPI
- LSM5
- LSM5 homolog, U6 small …
- 1.000
- PPI
- PRPF4
- pre-mRNA processing fac…
- 1.000
- PPI
- LSM8
- LSM8 homolog, U6 small …
- 1.000
- PPI
- SNRPE
- small nuclear ribonucle…
- 1.000
- PPI
- SNRPG
- small nuclear ribonucle…
- 1.000
- PPI
- SNRPD1
- small nuclear ribonucle…
- 1.000
- PPI
- PRPF8
- pre-mRNA processing fac…
- 1.000
- PPI
- SNRPD2
- small nuclear ribonucle…
- 1.000
- PPI
- EFTUD2
- elongation factor Tu GT…
- 1.000
- PPI
- PRPF3
- pre-mRNA processing fac…
- 1.000
- PPI
- PRPF31
- pre-mRNA processing fac…
- 1.000
- Complex
- SNRPD3
- small nuclear ribonucle…
- 1.000
- PPI
- SNRPF
- small nuclear ribonucle…
- 1.000
- PPI
- PPIH
- peptidylprolyl isomeras…
- 1.000
- PPI
- SNRNP200
- small nuclear ribonucle…
- 1.000
- PPI
- DDX6
- DEAD-box helicase 6
- 1.000
- PPI
- ALYREF
- Aly/REF export factor
- 1.000
- PPI
- PATL1
- PAT1 homolog 1, process…
- 1.000
- PPI
- SART3
- spliceosome associated …
- 1.000
- PPI
- SNU13
- small nuclear ribonucle…
- 1.000
- PPI
- XPO1
- exportin 1
- 1.000
- PPI
- HAT1
- histone acetyltransfera…
- 1.000
- PPI
- SF3A3
- splicing factor 3a subu…
- 1.000
- PPI
- PRPF6
- pre-mRNA processing fac…
- 1.000
- PPI
- SART1
- spliceosome associated …
- 1.000
- PPI
ENSG00000130520
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SART3
spliceosome associated factor 3, U4/U6 recycling protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF31
pre-mRNA processing factor 31
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EFTUD2
elongation factor Tu GTP binding domain containing 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPF
small nuclear ribonucleoprotein polypeptide F
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPD1
small nuclear ribonucleoprotein D1 polypeptide
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPD3
small nuclear ribonucleoprotein D3 polypeptide
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SF3A3
splicing factor 3a subunit 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF4
pre-mRNA processing factor 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF8
pre-mRNA processing factor 8
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDX6
DEAD-box helicase 6
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM1
LSM1 homolog, mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ALYREF
Aly/REF export factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
XPO1
exportin 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPE
small nuclear ribonucleoprotein polypeptide E
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM8
LSM8 homolog, U6 small nuclear RNA associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPG
small nuclear ribonucleoprotein polypeptide G
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PPIH
peptidylprolyl isomerase H
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF6
pre-mRNA processing factor 6
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPD2
small nuclear ribonucleoprotein D2 polypeptide
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PATL1
PAT1 homolog 1, processing body mRNA decay factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HAT1
histone acetyltransferase 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRNP200
small nuclear ribonucleoprotein U5 subunit 200
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF3
pre-mRNA processing factor 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SART1
spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNU13
small nuclear ribonucleoprotein 13
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000130520 | ENSG00000130520 | LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| M0QXB0 Q9Y4Z0 U3KQK1 V9GZ56 | ||||
| 25804 | ||||
| RNA degradation Spliceosome |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
28
|
SART3 | ENSG00000075856 | spliceosome associated factor 3, U4/U6 recycling protein | ||
| A0A494C0L2 A0A499FI31 F8VVK9 F8VZM2 F8W667 H0YHU8 Q15020 | ||||
| 9733 | ||||
29
|
LSM7 | ENSG00000130332 | LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| A0A087X2I5 K7EML7 K7ENY5 Q9UK45 | ||||
| 51690 | ||||
| RNA degradation Spliceosome | ||||
30
|
PRPF31 | ENSG00000105618 | pre-mRNA processing factor 31 | ||
| E7EN72 E7ESX0 E7EU94 E7EVX8 Q8WWY3 | ||||
| 26121 | ||||
| Spliceosome | ||||
29
|
EFTUD2 | ENSG00000108883 | elongation factor Tu GTP binding domain containing 2 | ||
| K7EIT3 K7EIV5 K7EJ74 K7EP67 K7EQ26 K7ERJ5 Q15029 | ||||
| 9343 | ||||
| Spliceosome | ||||
30
|
SNRPF | ENSG00000139343 | small nuclear ribonucleoprotein polypeptide F | ||
| A0A0B4J254 F8W0W6 P62306 | ||||
| 6636 | ||||
| Spliceosome | ||||
30
|
SNRPD1 | ENSG00000167088 | small nuclear ribonucleoprotein D1 polypeptide | ||
| J3QLI9 J3QLR7 P62314 | ||||
| 6632 | ||||
| Spliceosome | ||||
30
|
SNRPD3 | ENSG00000100028 | small nuclear ribonucleoprotein D3 polypeptide | ||
| P62318 | ||||
| 6634 | ||||
| Spliceosome | ||||
30
|
SF3A3 | ENSG00000183431 | splicing factor 3a subunit 3 | ||
| Q12874 | ||||
| 10946 | ||||
| Spliceosome | ||||
30
|
LSM5 | ENSG00000106355 | LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| B8ZZF8 F8W8Y8 Q9Y4Y9 | ||||
| 23658 | ||||
| RNA degradation Spliceosome | ||||
28
|
PRPF4 | ENSG00000136875 | pre-mRNA processing factor 4 | ||
| O43172 | ||||
| 9128 | ||||
| Spliceosome | ||||
30
|
LSM2 | ENSG00000204392 | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| Q9Y333 | ||||
| 57819 | ||||
| RNA degradation Spliceosome | ||||
30
|
PRPF8 | ENSG00000174231 | pre-mRNA processing factor 8 | ||
| I3L0J9 I3L1T8 I3L3Z8 Q6P2Q9 | ||||
| 10594 | ||||
| Spliceosome | ||||
30
|
LSM3 | ENSG00000170860 | LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| P62310 | ||||
| 27258 | ||||
| RNA degradation Spliceosome | ||||
27
|
DDX6 | ENSG00000110367 | DEAD-box helicase 6 | ||
| P26196 Q8IV96 | ||||
| 1656 | ||||
| RNA degradation | ||||
27
|
LSM1 | ENSG00000175324 | LSM1 homolog, mRNA degradation associated | ||
| E5RH18 E5RJ47 O15116 | ||||
| 27257 | ||||
| RNA degradation | ||||
30
|
ALYREF | ENSG00000183684 | Aly/REF export factor | ||
| E9PB61 Q86V81 | ||||
| 10189 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
30
|
XPO1 | ENSG00000082898 | exportin 1 | ||
| C9IYM2 C9IZS4 C9J673 C9JF49 C9JKM9 C9JQ02 C9JV99 F8WF71 H7BZC5 O14980 | ||||
| 7514 | ||||
| Ribosome biogenesis in eukaryotes RNA transport | ||||
30
|
LSM6 | ENSG00000164167 | LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| P62312 | ||||
| 11157 | ||||
| RNA degradation Spliceosome | ||||
30
|
SNRPE | ENSG00000182004 | small nuclear ribonucleoprotein polypeptide E | ||
| A6NHK2 P62304 | ||||
| 6635 | ||||
| Spliceosome | ||||
30
|
LSM8 | ENSG00000128534 | LSM8 homolog, U6 small nuclear RNA associated | ||
| C9JIZ0 C9JNV3 F2Z2Y6 O95777 | ||||
| 51691 | ||||
| RNA degradation Spliceosome | ||||
30
|
SNRPG | ENSG00000143977 | small nuclear ribonucleoprotein polypeptide G | ||
| C9JVQ0 F5H013 P62308 Q49AN9 | ||||
| 6637 | ||||
| Spliceosome | ||||
28
|
PPIH | ENSG00000171960 | peptidylprolyl isomerase H | ||
| A6NM32 C9JAN8 C9JQD4 H0YEL5 O43447 | ||||
| 10465 | ||||
| Spliceosome | ||||
29
|
PRPF6 | ENSG00000101161 | pre-mRNA processing factor 6 | ||
| O94906 | ||||
| 24148 | ||||
| Spliceosome | ||||
30
|
SNRPD2 | ENSG00000125743 | small nuclear ribonucleoprotein D2 polypeptide | ||
| K7EJB5 K7ERG4 P62316 | ||||
| 6633 | ||||
| Spliceosome | ||||
28
|
PATL1 | ENSG00000166889 | PAT1 homolog 1, processing body mRNA decay factor | ||
| Q86TB9 | ||||
| 219988 | ||||
| RNA degradation | ||||
24
|
HAT1 | ENSG00000128708 | histone acetyltransferase 1 | ||
| F8W9G7 F8WEW1 O14929 | ||||
| 8520 | ||||
29
|
SNRNP200 | ENSG00000144028 | small nuclear ribonucleoprotein U5 subunit 200 | ||
| A0A494C1A5 O75643 | ||||
| 23020 | ||||
| Spliceosome | ||||
29
|
PRPF3 | ENSG00000117360 | pre-mRNA processing factor 3 | ||
| O43395 | ||||
| 9129 | ||||
| Spliceosome | ||||
30
|
SART1 | ENSG00000175467 | spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP | ||
| E9PQI8 O43290 | ||||
| 9092 | ||||
| Spliceosome | ||||
29
|
SNU13 | ENSG00000100138 | small nuclear ribonucleoprotein 13 | ||
| A0A3B3IRU2 A0A3B3ISH1 A0A3B3ISH9 A0A3B3ISK4 A0A3B3IUA2 B1AHD1 P55769 | ||||
| 4809 | ||||
| Ribosome biogenesis in eukaryotes Spliceosome |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
- Add to current query
jSquid_subnetworks.xml | 356.23 KB | |
H.sapiens_subnetwork.tsv | 88.99 KB |