- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000129197
- RPA interacting protein
- TBP
- TATA-box binding protein
- 1.000
- PPI
- TAF11
- TATA-box binding protei…
- 0.999
- PPI
- RPA1
- replication protein A1
- 0.999
- PPI
- RPA2
- replication protein A2
- 0.995
- PPI
- TRRAP
- transformation/transcri…
- 0.992
- PPI
- SMARCB1
- SWI/SNF related, matrix…
- 0.991
- PPI
- NFYC
- nuclear transcription f…
- 0.955
- PPI
- CDCA5
- cell division cycle ass…
- 0.939
- PPI
- CCNT1
- cyclin T1
- 0.887
- Complex
- UBR7
- ubiquitin protein ligas…
- 0.843
- PPI
- NOP58
- NOP58 ribonucleoprotein
- 0.826
- Metabolic
- RUVBL2
- RuvB like AAA ATPase 2
- 0.776
- Metabolic
- BUD23
- BUD23 rRNA methyltransf…
- 0.754
- Metabolic
- PUM3
- pumilio RNA binding fam…
- 0.721
- Metabolic
- NHP2
- NHP2 ribonucleoprotein
- 0.712
- Metabolic
- WDR12
- WD repeat domain 12
- 0.704
- Metabolic
- DIMT1
- DIMT1 rRNA methyltransf…
- 0.703
- Metabolic
- EXOSC7
- exosome component 7
- 0.689
- Metabolic
- NIFK
- nucleolar protein inter…
- 0.687
- Metabolic
- DDOST
- dolichyl-diphosphooligo…
- 0.671
- Metabolic
- TCEA1
- transcription elongatio…
- 0.663
- Metabolic
- NUDC
- nuclear distribution C,…
- 0.648
- Metabolic
- DDX46
- DEAD-box helicase 46
- 0.646
- Metabolic
- NOP56
- NOP56 ribonucleoprotein
- 0.636
- Metabolic
- PCNA
- proliferating cell nucl…
- 0.626
- Complex
- EEF1E1
- eukaryotic translation …
- 0.612
- Metabolic
- POLR2F
- RNA polymerase II subun…
- 0.604
- Metabolic
- POLR2B
- RNA polymerase II subun…
- 0.599
- Metabolic
- TNS4
- tensin 4
- 0.596
- PPI
- RPF2
- ribosome production fac…
- 0.588
- Metabolic
ENSG00000129197
RPA interacting protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NOP58
NOP58 ribonucleoprotein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
WDR12
WD repeat domain 12
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PCNA
proliferating cell nuclear antigen
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDOST
dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NIFK
nucleolar protein interacting with the FHA domain of MKI67
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BUD23
BUD23 rRNA methyltransferase and ribosome maturation factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPA2
replication protein A2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPA1
replication protein A1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EXOSC7
exosome component 7
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TCEA1
transcription elongation factor A1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RUVBL2
RuvB like AAA ATPase 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DIMT1
DIMT1 rRNA methyltransferase and ribosome maturation factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A0G2JRV3
- A0A0U1RQQ2
- A0A0U1RRB8
- A0A2R8Y5N5
- A0A2R8Y5Z2
- A0A2R8YDN6
- A0A2R8YEE8
- B5MCL5
- C9JTA6
- G5E975
- Q12824
- NCBI
TRRAP
transformation/transcription domain associated protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
UBR7
ubiquitin protein ligase E3 component n-recognin 7
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PUM3
pumilio RNA binding family member 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TBP
TATA-box binding protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR2F
RNA polymerase II subunit F
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TAF11
TATA-box binding protein associated factor 11
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NOP56
NOP56 ribonucleoprotein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EEF1E1
eukaryotic translation elongation factor 1 epsilon 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NUDC
nuclear distribution C, dynein complex regulator
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NFYC
nuclear transcription factor Y subunit gamma
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPF2
ribosome production factor 2 homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NHP2
NHP2 ribonucleoprotein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDX46
DEAD-box helicase 46
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR2B
RNA polymerase II subunit B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CCNT1
cyclin T1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CDCA5
cell division cycle associated 5
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TNS4
tensin 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000129197 | ENSG00000129197 | RPA interacting protein | ||
| Q86UA6 | ||||
| 84268 |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
24
|
NOP58 | ENSG00000055044 | NOP58 ribonucleoprotein | ||
| F8WED0 H7BZ72 Q9Y2X3 | ||||
| 51602 | ||||
| Ribosome biogenesis in eukaryotes | ||||
20
|
WDR12 | ENSG00000138442 | WD repeat domain 12 | ||
| Q9GZL7 | ||||
| 55759 | ||||
27
|
PCNA | ENSG00000132646 | proliferating cell nuclear antigen | ||
| P12004 | ||||
| 5111 | ||||
| Tight junction Cell cycle | ||||
| DNA replication Mismatch repair Nucleotide excision repair Base excision repair | ||||
16
|
DDOST | ENSG00000244038 | dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit | ||
| A0A0C4DGS1 P39656 U3KQ84 | ||||
| 1650 | ||||
| N-Glycan biosynthesis Various types of N-glycan biosynthesis Protein processing in endoplasmic reticulum | ||||
21
|
NIFK | ENSG00000155438 | nucleolar protein interacting with the FHA domain of MKI67 | ||
| C9J6C5 C9J808 H7BZL0 Q9BYG3 | ||||
| 84365 | ||||
21
|
BUD23 | ENSG00000071462 | BUD23 rRNA methyltransferase and ribosome maturation factor | ||
| B3KR83 E9PCQ7 F2Z3D9 F8VZ18 F8W1Y1 F8WD67 F8WD87 H7C0G4 H7C170 H7C439 O43709 | ||||
| 114049 | ||||
24
|
RPA2 | ENSG00000117748 | replication protein A2 | ||
| P15927 Q5TEJ0 Q5TEJ7 | ||||
| 6118 | ||||
| DNA replication Fanconi anemia pathway Homologous recombination Mismatch repair Nucleotide excision repair | ||||
25
|
RPA1 | ENSG00000132383 | replication protein A1 | ||
| I3L2M5 I3L4R8 I3L524 P27694 | ||||
| 6117 | ||||
| DNA replication Fanconi anemia pathway Homologous recombination Mismatch repair Nucleotide excision repair | ||||
20
|
EXOSC7 | ENSG00000075914 | exosome component 7 | ||
| Q15024 | ||||
| 23016 | ||||
| RNA degradation | ||||
27
|
TCEA1 | ENSG00000187735 | transcription elongation factor A1 | ||
| A0A1W2PPV7 A0A1W2PPZ5 A0A1W2PRL9 A0A1W2PS15 B7Z4S1 E5RFI1 E5RIS7 E5RJ93 E5RK46 P23193 | ||||
| 6917 | ||||
26
|
RUVBL2 | ENSG00000183207 | RuvB like AAA ATPase 2 | ||
| A0A1W2PS22 A0A1W2PS48 M0QXI6 M0QXZ7 M0QYD8 M0R0Y3 M0R0Z0 Q9Y230 X6R2L4 | ||||
| 10856 | ||||
21
|
DIMT1 | ENSG00000086189 | DIMT1 rRNA methyltransferase and ribosome maturation factor | ||
| A0A0C4DGB1 A0A494C0G7 D6RCL3 Q9UNQ2 | ||||
| 27292 | ||||
16
|
SMARCB1 | ENSG00000099956 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 | ||
| A0A0G2JRV3 A0A0U1RQQ2 A0A0U1RRB8 A0A2R8Y5N5 A0A2R8Y5Z2 A0A2R8YDN6 A0A2R8YEE8 B5MCL5 C9JTA6 G5E975 Q12824 | ||||
| 6598 | ||||
15
|
TRRAP | ENSG00000196367 | transformation/transcription domain associated protein | ||
| A0A2R8YFJ4 C9K0N1 F2Z2U4 H0Y4W2 Q9Y4A5 | ||||
| 8295 | ||||
14
|
UBR7 | ENSG00000012963 | ubiquitin protein ligase E3 component n-recognin 7 | ||
| G3V253 G3V2G3 G3V336 H0YJA0 H0YJM2 H0YJY4 Q8N806 | ||||
| 55148 | ||||
24
|
PUM3 | ENSG00000080608 | pumilio RNA binding family member 3 | ||
| Q15397 S4R3K8 | ||||
| 9933 | ||||
21
|
TBP | ENSG00000112592 | TATA-box binding protein | ||
| A0A1B0GVC6 H0Y6D8 P20226 Q32MN6 Q7Z6S4 Q7Z6S5 | ||||
| 6908 | ||||
| Basal transcription factors | ||||
26
|
POLR2F | ENSG00000100142 | RNA polymerase II subunit F | ||
| B0QYL8 B0QYL9 F8WC47 H0Y2U7 H0Y439 P61218 U3KPV3 U3KPY1 U3KQB0 U3KQQ7 U3KQS8 | ||||
| 5435 | ||||
| Cytosolic DNA-sensing pathway | ||||
| RNA polymerase | ||||
8
|
TAF11 | ENSG00000064995 | TATA-box binding protein associated factor 11 | ||
| A0A3B3ITY8 Q15544 | ||||
| 6882 | ||||
| Basal transcription factors | ||||
26
|
NOP56 | ENSG00000101361 | NOP56 ribonucleoprotein | ||
| A0A494C128 H0Y653 H0YDU4 O00567 Q5JXT2 | ||||
| 10528 | ||||
| Ribosome biogenesis in eukaryotes | ||||
20
|
EEF1E1 | ENSG00000124802 | eukaryotic translation elongation factor 1 epsilon 1 | ||
| D6RBD7 D6RCQ0 H0YAH9 H0YAL7 O43324 | ||||
| 9521 | ||||
24
|
NUDC | ENSG00000090273 | nuclear distribution C, dynein complex regulator | ||
| A0A0A0MSS4 A0A0A0MSU9 Q9Y266 | ||||
| 10726 | ||||
4
|
NFYC | ENSG00000066136 | nuclear transcription factor Y subunit gamma | ||
| A0A0A0MT00 E9PI99 E9PJA8 E9PL11 E9PQR2 H0Y803 Q13952 Q5T6K5 Q5T6K7 | ||||
| 4802 | ||||
| Antigen processing and presentation | ||||
25
|
RPF2 | ENSG00000197498 | ribosome production factor 2 homolog | ||
| Q5VXM9 Q5VXN0 Q9H7B2 U3KQN5 | ||||
| 84154 | ||||
24
|
NHP2 | ENSG00000145912 | NHP2 ribonucleoprotein | ||
| D6RC52 D6RCB9 H0YC83 J3QSY4 Q9NX24 | ||||
| 55651 | ||||
| Ribosome biogenesis in eukaryotes | ||||
22
|
DDX46 | ENSG00000145833 | DEAD-box helicase 46 | ||
| A0A0C4DG89 D6RJA6 H0Y9U3 H0YAD5 Q7L014 | ||||
| 9879 | ||||
| Spliceosome | ||||
25
|
POLR2B | ENSG00000047315 | RNA polymerase II subunit B | ||
| A0A1W2PPT5 C9J2Y9 C9J4M6 C9JMN3 C9JZW8 P30876 | ||||
| 5431 | ||||
| RNA polymerase | ||||
6
|
CCNT1 | ENSG00000129315 | cyclin T1 | ||
| A0A1W2PQ16 O60563 | ||||
| 904 | ||||
3
|
CDCA5 | ENSG00000146670 | cell division cycle associated 5 | ||
| B5MBX0 H0YCL8 H0YCR8 H0YCT9 H0YCZ9 Q96FF9 | ||||
| 113130 | ||||
1
|
TNS4 | ENSG00000131746 | tensin 4 | ||
| J3QLA4 Q8IZW8 | ||||
| 84951 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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jSquid_subnetworks.xml | 315.37 KB | |
H.sapiens_subnetwork.tsv | 56.18 KB |