Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000115464
- ubiquitin specific pept…
- ATM
- ATM serine/threonine ki…
- 0.984
- PPI
- EIF3M
- eukaryotic translation …
- 0.930
- PPI
- CSNK1A1
- casein kinase 1 alpha 1
- 0.859
- PPI
- RBM3
- RNA binding motif prote…
- 0.753
- PPI
- DNAJC13
- DnaJ heat shock protein…
- 0.509
- Complex
- SOX2
- SRY-box transcription f…
- 0.475
- PPI
- PCGF1
- polycomb group ring fin…
- 0.450
- PPI
- CHD6
- chromodomain helicase D…
- 0.449
- Complex
- EPC1
- enhancer of polycomb ho…
- 0.445
- Complex
- MDN1
- midasin AAA ATPase 1
- 0.432
- Metabolic
- TAF2
- TATA-box binding protei…
- 0.425
- Metabolic
- NUP153
- nucleoporin 153
- 0.400
- Complex
Subnetwork gene interactions
ENSG00000115464
ubiquitin specific peptidase 34
FunCoup
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- Ensembl
- UniProt
- NCBI
CHD6
chromodomain helicase DNA binding protein 6
FunCoup
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- Ensembl
- UniProt
- NCBI
ATM
ATM serine/threonine kinase
FunCoup
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- Ensembl
- UniProt
- NCBI
TAF2
TATA-box binding protein associated factor 2
FunCoup
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- Ensembl
- UniProt
- NCBI
MDN1
midasin AAA ATPase 1
FunCoup
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- Ensembl
- UniProt
- NCBI
NUP153
nucleoporin 153
FunCoup
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- Ensembl
- UniProt
- NCBI
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13
FunCoup
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- Ensembl
- UniProt
- NCBI
EPC1
enhancer of polycomb homolog 1
FunCoup
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- Ensembl
- UniProt
- NCBI
CSNK1A1
casein kinase 1 alpha 1
FunCoup
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- Ensembl
- UniProt
- A0A590UJ43
- A0A590UJQ7
- A0A590UK94
- A0A5F9W493
- D6REM4
- D6RGE5
- E5RG27
- E7ETM0
- H0Y9X2
- P48729
- U3KPX3
- U3KQ83
- U3KQK7
- NCBI
SOX2
SRY-box transcription factor 2
FunCoup
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- Ensembl
- UniProt
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PCGF1
polycomb group ring finger 1
FunCoup
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- Ensembl
- UniProt
- NCBI
RBM3
RNA binding motif protein 3
FunCoup
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- Ensembl
- UniProt
- NCBI
Query genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
12
|
ENSG00000115464 | ENSG00000115464 | ubiquitin specific peptidase 34 | ||
| A0A0C4DG73 H7BZ73 H7C150 H7C183 Q70CQ2 | ||||
| 9736 |
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
4
|
CHD6 | ENSG00000124177 | chromodomain helicase DNA binding protein 6 | ||
| A0A075B6P4 C9JFU2 H7C294 Q8TD26 | ||||
| 84181 | ||||
3
|
ATM | ENSG00000149311 | ATM serine/threonine kinase | ||
| A0A087X0E9 E9PIN0 E9PIQ5 E9PRG7 H0YDU7 H0YEC6 M0QXY8 Q13315 Q6P7P1 | ||||
| 472 | ||||
| p53 signaling pathway FoxO signaling pathway Apoptosis Cell cycle NF-kappa B signaling pathway | ||||
| Homologous recombination | ||||
3
|
TAF2 | ENSG00000064313 | TATA-box binding protein associated factor 2 | ||
| E5RI28 H0YB55 H0YC37 H0YEX2 Q6P1X5 | ||||
| 6873 | ||||
| Basal transcription factors | ||||
4
|
MDN1 | ENSG00000112159 | midasin AAA ATPase 1 | ||
| M0QXR3 Q5T795 Q9NU22 | ||||
| 23195 | ||||
| Ribosome biogenesis in eukaryotes | ||||
3
|
NUP153 | ENSG00000124789 | nucleoporin 153 | ||
| P49790 | ||||
| 9972 | ||||
| RNA transport | ||||
2
|
DNAJC13 | ENSG00000138246 | DnaJ heat shock protein family (Hsp40) member C13 | ||
| A0A3B3IRM0 H0Y8Q2 H0YA63 O75165 | ||||
| 23317 | ||||
5
|
EPC1 | ENSG00000120616 | enhancer of polycomb homolog 1 | ||
| A0A590UJ87 A0A590UJ89 A0A590UJN0 Q9H2F5 | ||||
| 80314 | ||||
2
|
CSNK1A1 | ENSG00000113712 | casein kinase 1 alpha 1 | ||
| A0A590UJ43 A0A590UJQ7 A0A590UK94 A0A5F9W493 D6REM4 D6RGE5 E5RG27 E7ETM0 H0Y9X2 P48729 U3KPX3 U3KQ83 U3KQK7 | ||||
| 1452 | ||||
| Wnt signaling pathway Hedgehog signaling pathway | ||||
3
|
SOX2 | ENSG00000181449 | SRY-box transcription factor 2 | ||
| P48431 | ||||
| 6657 | ||||
| Hippo signaling pathway | ||||
1
|
PCGF1 | ENSG00000115289 | polycomb group ring finger 1 | ||
| Q9BSM1 | ||||
| 84759 | ||||
1
|
RBM3 | ENSG00000102317 | RNA binding motif protein 3 | ||
| P98179 Q9H5V0 | ||||
| 5935 | ||||
1
|
EIF3M | ENSG00000149100 | eukaryotic translation initiation factor 3 subunit M | ||
| E7ESM3 E9PN86 E9PRI2 E9PRY0 E9PSB3 H0YCQ8 J3KNJ2 Q7L2H7 | ||||
| 10480 |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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jSquid_subnetworks.xml | 111.29 KB | |
H.sapiens_subnetwork.tsv | 3.99 KB |