Found 1 of 1 query genes

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Query interactions

Interaction partners
Confidence
Network
MEX
PIN
SCL
PHP
MIR
TFB
PEX
GIN
DOM
QMS
GRG
Evidence types
HSA
MMU
RNO
CFA
GGA
DRE
CIN
DME
CEL
BTA
SCE
ATH
SPO
BSU
ECO
PFA
DDI
SSO
SSC
MJA
OSA
Species
In Gold st.

ID Query gene
ID Query ortholog

Log-likelihood ratio (LLR)
	Highly positive
	Positive
	Zero
	Negative
	Highly negative
Known coupling
	This network
	Other network

2. ENSG00000115128
3. splicing factor 3b subu…
- 2. SF3B1
  3. splicing factor 3b subu…
  4. 1.000
  5. PPI
- 2. SNRPG
  3. small nuclear ribonucle…
  4. 1.000
  5. PPI
- 2. PRPF8
  3. pre-mRNA processing fac…
  4. 1.000
  5. PPI
- 2. SNW1
  3. SNW domain containing 1
  4. 1.000
  5. PPI
- 2. CDC5L
  3. cell division cycle 5 l…
  4. 1.000
  5. PPI
- 2. PRPF19
  3. pre-mRNA processing fac…
  4. 1.000
  5. PPI
- 2. SNRPD1
  3. small nuclear ribonucle…
  4. 1.000
  5. Metabolic
- 2. SMNDC1
  3. survival motor neuron d…
  4. 1.000
  5. PPI
- 2. SNRPF
  3. small nuclear ribonucle…
  4. 1.000
  5. Metabolic
- 2. PHF5A
  3. PHD finger protein 5A
  4. 1.000
  5. Metabolic
- 2. DHX15
  3. DEAH-box helicase 15
  4. 1.000
  5. Metabolic
- 2. CWC27
  3. CWC27 spliceosome assoc…
  4. 0.999
  5. Metabolic
- 2. LSM7
  3. LSM7 homolog, U6 small …
  4. 0.999
  5. Metabolic
- 2. LARP7
  3. La ribonucleoprotein 7,…
  4. 0.999
  5. PPI
- 2. SF3B3
  3. splicing factor 3b subu…
  4. 0.999
  5. PPI
- 2. CDC40
  3. cell division cycle 40
  4. 0.999
  5. Metabolic
- 2. VDAC1
  3. voltage dependent anion…
  4. 0.999
  5. PPI
- 2. SNRPD2
  3. small nuclear ribonucle…
  4. 0.999
  5. Metabolic
- 2. CAND1
  3. cullin associated and n…
  4. 0.999
  5. PPI
- 2. CWC22
  3. CWC22 spliceosome assoc…
  4. 0.998
  5. Metabolic
- 2. DCPS
  3. decapping enzyme, scave…
  4. 0.998
  5. PPI
- 2. RBX1
  3. ring-box 1
  4. 0.998
  5. Metabolic
- 2. SNRPD3
  3. small nuclear ribonucle…
  4. 0.998
  5. Metabolic
- 2. DHX8
  3. DEAH-box helicase 8
  4. 0.998
  5. PPI
- 2. PPIL1
  3. peptidylprolyl isomeras…
  4. 0.998
  5. Metabolic
- 2. SF3A3
  3. splicing factor 3a subu…
  4. 0.997
  5. Metabolic
- 2. SEC13
  3. SEC13 homolog, nuclear …
  4. 0.997
  5. Metabolic
- 2. BUD31
  3. BUD31 homolog
  4. 0.997
  5. PPI
- 2. NOP58
  3. NOP58 ribonucleoprotein
  4. 0.997
  5. Complex
- 2. EFTUD2
  3. elongation factor Tu GT…
  4. 0.997
  5. PPI

Subnetwork gene interactions

ENSG00000115128

splicing factor 3b subunit 6

FunCoup

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Ensembl

ENSG00000115128

UniProt

Q9Y3B4

NCBI

51639

SNRPF

small nuclear ribonucleoprotein polypeptide F

FunCoup

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Ensembl

ENSG00000139343

UniProt

NCBI

6636

SNRPD1

small nuclear ribonucleoprotein D1 polypeptide

FunCoup

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Ensembl

ENSG00000167088

UniProt

NCBI

6632

BUD31

BUD31 homolog

FunCoup

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Ensembl

ENSG00000106245

UniProt

NCBI

8896

DHX15

DEAH-box helicase 15

FunCoup

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Ensembl

ENSG00000109606

UniProt

O43143

NCBI

1665

SF3B1

splicing factor 3b subunit 1

FunCoup

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Ensembl

ENSG00000115524

UniProt

NCBI

23451

SNRPD3

small nuclear ribonucleoprotein D3 polypeptide

FunCoup

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Ensembl

ENSG00000100028

UniProt

P62318

NCBI

6634

SF3A3

splicing factor 3a subunit 3

FunCoup

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Ensembl

ENSG00000183431

UniProt

Q12874

NCBI

10946

CAND1

cullin associated and neddylation dissociated 1

FunCoup

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Ensembl

ENSG00000111530

UniProt

NCBI

55832

SMNDC1

survival motor neuron domain containing 1

FunCoup

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Ensembl

ENSG00000119953

UniProt

O75940

NCBI

10285

DCPS

decapping enzyme, scavenger

FunCoup

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Ensembl

ENSG00000110063

UniProt

NCBI

28960

CWC22

CWC22 spliceosome associated protein homolog

FunCoup

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Ensembl

ENSG00000163510

UniProt

NCBI

57703

SNW1

SNW domain containing 1

FunCoup

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Ensembl

ENSG00000100603

UniProt

NCBI

22938

EFTUD2

elongation factor Tu GTP binding domain containing 2

FunCoup

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Ensembl

ENSG00000108883

UniProt

NCBI

9343

PPIL1

peptidylprolyl isomerase like 1

FunCoup

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Ensembl

ENSG00000137168

UniProt

Q9Y3C6

NCBI

51645

CDC40

cell division cycle 40

FunCoup

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Ensembl

ENSG00000168438

UniProt

NCBI

51362

PHF5A

PHD finger protein 5A

FunCoup

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Ensembl

ENSG00000100410

UniProt

Q7RTV0

NCBI

84844

NOP58

NOP58 ribonucleoprotein

FunCoup

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Ensembl

ENSG00000055044

UniProt

NCBI

51602

PRPF19

pre-mRNA processing factor 19

FunCoup

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Ensembl

ENSG00000110107

UniProt

NCBI

27339

SEC13

SEC13 homolog, nuclear pore and COPII coat complex component

FunCoup

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Ensembl

ENSG00000157020

UniProt

NCBI

6396

RBX1

ring-box 1

FunCoup

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Ensembl

ENSG00000100387

UniProt

P62877

NCBI

9978

LSM7

LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated

FunCoup

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Ensembl

ENSG00000130332

UniProt

NCBI

51690

SNRPD2

small nuclear ribonucleoprotein D2 polypeptide

FunCoup

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Ensembl

ENSG00000125743

UniProt

NCBI

6633

VDAC1

voltage dependent anion channel 1

FunCoup

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Ensembl

ENSG00000213585

UniProt

NCBI

7416

CWC27

CWC27 spliceosome associated cyclophilin

FunCoup

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Ensembl

ENSG00000153015

UniProt

NCBI

10283

CDC5L

cell division cycle 5 like

FunCoup

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Ensembl

ENSG00000096401

UniProt

Q99459

NCBI

SF3B3

splicing factor 3b subunit 3

FunCoup

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Ensembl

ENSG00000189091

UniProt

NCBI

23450

DHX8

DEAH-box helicase 8

FunCoup

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Ensembl

ENSG00000067596

UniProt

NCBI

1659

PRPF8

pre-mRNA processing factor 8

FunCoup

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Ensembl

ENSG00000174231

UniProt

NCBI

10594

LARP7

La ribonucleoprotein 7, transcriptional regulator

FunCoup

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Ensembl

ENSG00000174720

UniProt

NCBI

51574

SNRPG

small nuclear ribonucleoprotein polypeptide G

FunCoup

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Ensembl

ENSG00000143977

UniProt

NCBI

6637

Query genes

		Identifier	Description
30	ENSG00000115128	ENSG00000115128	splicing factor 3b subunit 6
		UniProt	Q9Y3B4
		NCBI	51639
		KEGG metabolic	Spliceosome

Subnetwork genes

		Identifier	Description
29	SNRPF	ENSG00000139343	small nuclear ribonucleoprotein polypeptide F
		UniProt	A0A0B4J254 F8W0W6 P62306
		NCBI	6636
		KEGG metabolic	Spliceosome
30	SNRPD1	ENSG00000167088	small nuclear ribonucleoprotein D1 polypeptide
		UniProt	J3QLI9 J3QLR7 P62314
		NCBI	6632
		KEGG metabolic	Spliceosome
27	BUD31	ENSG00000106245	BUD31 homolog
		UniProt	C9JCD9 F8WCN7 P41223
		NCBI	8896
		KEGG metabolic	Spliceosome
30	DHX15	ENSG00000109606	DEAH-box helicase 15
		UniProt	O43143
		NCBI	1665
		KEGG metabolic	Spliceosome
28	SF3B1	ENSG00000115524	splicing factor 3b subunit 1
		UniProt	A0A494C1M2 B4DGZ4 F8WC19 H7C341 O75533
		NCBI	23451
		KEGG metabolic	Spliceosome
30	SNRPD3	ENSG00000100028	small nuclear ribonucleoprotein D3 polypeptide
		UniProt	P62318
		NCBI	6634
		KEGG metabolic	Spliceosome
30	SF3A3	ENSG00000183431	splicing factor 3a subunit 3
		UniProt	Q12874
		NCBI	10946
		KEGG metabolic	Spliceosome
28	CAND1	ENSG00000111530	cullin associated and neddylation dissociated 1
		UniProt	A0A0C4DGH5 F5H6I6 H0YH27 Q86VP6
		NCBI	55832
29	SMNDC1	ENSG00000119953	survival motor neuron domain containing 1
		UniProt	O75940
		NCBI	10285
		KEGG metabolic	Spliceosome
21	DCPS	ENSG00000110063	decapping enzyme, scavenger
		UniProt	A0A3B3ITF0 Q96C86
		NCBI	28960
		KEGG metabolic	RNA degradation
27	CWC22	ENSG00000163510	CWC22 spliceosome associated protein homolog
		UniProt	B7WP74 Q9HCG8
		NCBI	57703
30	SNW1	ENSG00000100603	SNW domain containing 1
		UniProt	G3V3A4 G3V4E0 G3V4X8 G3V5R3 Q13573
		NCBI	22938
		KEGG signaling	Notch signaling pathway
		KEGG metabolic	Spliceosome
28	EFTUD2	ENSG00000108883	elongation factor Tu GTP binding domain containing 2
		UniProt	K7EIT3 K7EIV5 K7EJ74 K7EP67 K7EQ26 K7ERJ5 Q15029
		NCBI	9343
		KEGG metabolic	Spliceosome
30	PPIL1	ENSG00000137168	peptidylprolyl isomerase like 1
		UniProt	Q9Y3C6
		NCBI	51645
		KEGG metabolic	Spliceosome
28	CDC40	ENSG00000168438	cell division cycle 40
		UniProt	O60508 Q5SRN1
		NCBI	51362
		KEGG metabolic	Spliceosome
27	PHF5A	ENSG00000100410	PHD finger protein 5A
		UniProt	Q7RTV0
		NCBI	84844
		KEGG metabolic	Spliceosome
29	NOP58	ENSG00000055044	NOP58 ribonucleoprotein
		UniProt	F8WED0 H7BZ72 Q9Y2X3
		NCBI	51602
		KEGG metabolic	Ribosome biogenesis in eukaryotes
30	PRPF19	ENSG00000110107	pre-mRNA processing factor 19
		UniProt	F5GY56 F5H2I0 H0YGF3 H0YGZ5 Q9UMS4
		NCBI	27339
		KEGG metabolic	Spliceosome Ubiquitin mediated proteolysis
27	SEC13	ENSG00000157020	SEC13 homolog, nuclear pore and COPII coat complex component
		UniProt	A8MXL6 C9J0S2 C9JBJ5 C9JIB6 E7ERC8 P55735
		NCBI	6396
		KEGG signaling	mTOR signaling pathway
		KEGG metabolic	Protein processing in endoplasmic reticulum RNA transport
25	RBX1	ENSG00000100387	ring-box 1
		UniProt	P62877
		NCBI	9978
		KEGG signaling	Oocyte meiosis Wnt signaling pathway HIF-1 signaling pathway Cell cycle TGF-beta signaling pathway
		KEGG metabolic	Ubiquitin mediated proteolysis Protein processing in endoplasmic reticulum Nucleotide excision repair
30	LSM7	ENSG00000130332	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
		UniProt	A0A087X2I5 K7EML7 K7ENY5 Q9UK45
		NCBI	51690
		KEGG metabolic	RNA degradation Spliceosome
30	SNRPD2	ENSG00000125743	small nuclear ribonucleoprotein D2 polypeptide
		UniProt	K7EJB5 K7ERG4 P62316
		NCBI	6633
		KEGG metabolic	Spliceosome
21	VDAC1	ENSG00000213585	voltage dependent anion channel 1
		UniProt	C9JI87 P21796
		NCBI	7416
		KEGG signaling	NOD-like receptor signaling pathway cGMP-PKG signaling pathway Calcium signaling pathway
26	CWC27	ENSG00000153015	CWC27 spliceosome associated cyclophilin
		UniProt	D6REK3 Q6UX04
		NCBI	10283
29	CDC5L	ENSG00000096401	cell division cycle 5 like
		UniProt	Q99459
		NCBI	988
		KEGG metabolic	Spliceosome
28	SF3B3	ENSG00000189091	splicing factor 3b subunit 3
		UniProt	H3BMB0 I3L4G7 J3QKV4 J3QL37 J3QRB2 Q15393
		NCBI	23450
		KEGG metabolic	Spliceosome
25	DHX8	ENSG00000067596	DEAH-box helicase 8
		UniProt	F5H658 K7EJH9 K7END7 K7EQH7 Q14562
		NCBI	1659
		KEGG metabolic	Spliceosome
30	PRPF8	ENSG00000174231	pre-mRNA processing factor 8
		UniProt	I3L0J9 I3L1T8 I3L3Z8 Q6P2Q9
		NCBI	10594
		KEGG metabolic	Spliceosome
24	LARP7	ENSG00000174720	La ribonucleoprotein 7, transcriptional regulator
		UniProt	D6R9Z6 D6RAF3 D6RBH8 D6RF22 D6RF49 D6RFF0 H0YA82 Q4G0J3
		NCBI	51574
28	SNRPG	ENSG00000143977	small nuclear ribonucleoprotein polypeptide G
		UniProt	C9JVQ0 F5H013 P62308 Q49AN9
		NCBI	6637
		KEGG metabolic	Spliceosome

Enrichment analysis

Search for enrichment of pathways or functional gene sets for your subnetwork genes

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	jSquid_subnetworks.xml	353.17 KB
	H.sapiens_subnetwork.tsv	83.45 KB

Species:

Network information:

Filter Results:

Network appearance:

ENSG00000115128

SNRPF

SNRPD1

BUD31

DHX15

SF3B1

SNRPD3

SF3A3

CAND1

SMNDC1

DCPS

CWC22

SNW1

EFTUD2

PPIL1

CDC40

PHF5A

NOP58

PRPF19

SEC13

RBX1

LSM7

SNRPD2

VDAC1

CWC27

CDC5L

SF3B3

DHX8

PRPF8

LARP7

SNRPG

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