Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000112619
- peripherin 2
- ROM1
- retinal outer segment m…
- 0.740
- PPI
- CNGA1
- cyclic nucleotide gated…
- 0.636
- PPI
- RHO
- rhodopsin
- 0.617
- PPI
- SAG
- S-antigen visual arrest…
- 0.523
- PPI
- GNAT1
- G protein subunit alpha…
- 0.491
- PPI
- PTH1R
- parathyroid hormone 1 r…
- 0.459
- Signaling
Subnetwork gene interactions
ENSG00000112619
peripherin 2
FunCoup
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- Ensembl
- UniProt
- NCBI
CNGA1
cyclic nucleotide gated channel subunit alpha 1
FunCoup
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- Ensembl
- UniProt
- NCBI
RHO
rhodopsin
FunCoup
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- Ensembl
- UniProt
- NCBI
GNAT1
G protein subunit alpha transducin 1
FunCoup
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- Ensembl
- UniProt
- NCBI
ROM1
retinal outer segment membrane protein 1
FunCoup
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- Ensembl
- UniProt
- NCBI
PTH1R
parathyroid hormone 1 receptor
FunCoup
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- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Query genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
6
|
ENSG00000112619 | ENSG00000112619 | peripherin 2 | ||
| P23942 | ||||
| 5961 |
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
3
|
CNGA1 | ENSG00000198515 | cyclic nucleotide gated channel subunit alpha 1 | ||
| D6R978 D6RCF1 P29973 | ||||
| 1259 | ||||
| Phototransduction cAMP signaling pathway cGMP-PKG signaling pathway | ||||
4
|
RHO | ENSG00000163914 | rhodopsin | ||
| P08100 | ||||
| 6010 | ||||
| Phototransduction | ||||
3
|
GNAT1 | ENSG00000114349 | G protein subunit alpha transducin 1 | ||
| C9JCV8 P11488 | ||||
| 2779 | ||||
| Phototransduction | ||||
1
|
ROM1 | ENSG00000149489 | retinal outer segment membrane protein 1 | ||
| E9PKF5 E9PMR7 E9PS24 Q03395 | ||||
| 6094 | ||||
1
|
PTH1R | ENSG00000160801 | parathyroid hormone 1 receptor | ||
| E7EWE7 F2Z314 H7C0Q3 Q03431 | ||||
| 5745 | ||||
| Neuroactive ligand-receptor interaction | ||||
2
|
SAG | ENSG00000130561 | S-antigen visual arrestin | ||
| C9JSX4 E7ESX4 F8WCN5 P10523 | ||||
| 6295 | ||||
| Phototransduction |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
Copied subnetwork genes to clipboard
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jSquid_subnetworks.xml | 81.88 KB | |
H.sapiens_subnetwork.tsv | 1.87 KB |