Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000046647
- gem nuclear organelle a…
- SNRPD1
- small nuclear ribonucle…
- 0.802
- Metabolic
- PRPF18
- pre-mRNA processing fac…
- 0.681
- Metabolic
- YARS2
- tyrosyl-tRNA synthetase…
- 0.650
- Metabolic
- SNRPD3
- small nuclear ribonucle…
- 0.569
- Metabolic
- ACTR6
- actin related protein 6
- 0.483
- Metabolic
- ATP6V1D
- ATPase H+ transporting …
- 0.469
- Metabolic
- RFC2
- replication factor C su…
- 0.441
- Metabolic
- SART1
- spliceosome associated …
- 0.419
- Metabolic
- CDC40
- cell division cycle 40
- 0.405
- Metabolic
- SNRPF
- small nuclear ribonucle…
- 0.404
- Metabolic
- THOC7
- THO complex 7
- 0.404
- Metabolic
- RIOK2
- RIO kinase 2
- 0.403
- Metabolic
Subnetwork gene interactions
ENSG00000046647
gem nuclear organelle associated protein 8
FunCoup
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- Ensembl
- UniProt
- NCBI
SNRPD3
small nuclear ribonucleoprotein D3 polypeptide
FunCoup
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- Ensembl
- UniProt
- NCBI
PRPF18
pre-mRNA processing factor 18
FunCoup
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- Ensembl
- UniProt
- NCBI
RFC2
replication factor C subunit 2
FunCoup
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- Ensembl
- UniProt
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YARS2
tyrosyl-tRNA synthetase 2
FunCoup
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- Ensembl
- UniProt
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THOC7
THO complex 7
FunCoup
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- Ensembl
- UniProt
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SNRPF
small nuclear ribonucleoprotein polypeptide F
FunCoup
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- Ensembl
- UniProt
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SART1
spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP
FunCoup
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- Ensembl
- UniProt
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ACTR6
actin related protein 6
FunCoup
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- Ensembl
- UniProt
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CDC40
cell division cycle 40
FunCoup
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- Ensembl
- UniProt
- NCBI
SNRPD1
small nuclear ribonucleoprotein D1 polypeptide
FunCoup
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- Ensembl
- UniProt
- NCBI
ATP6V1D
ATPase H+ transporting V1 subunit D
FunCoup
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Query genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
12
|
ENSG00000046647 | ENSG00000046647 | gem nuclear organelle associated protein 8 | ||
| H7BYE2 Q9NWZ8 | ||||
| 54960 | ||||
| RNA transport |
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
11
|
SNRPD3 | ENSG00000100028 | small nuclear ribonucleoprotein D3 polypeptide | ||
| P62318 | ||||
| 6634 | ||||
| Spliceosome | ||||
12
|
PRPF18 | ENSG00000165630 | pre-mRNA processing factor 18 | ||
| Q5T9P7 Q5T9P8 Q99633 | ||||
| 8559 | ||||
| Spliceosome | ||||
11
|
RFC2 | ENSG00000049541 | replication factor C subunit 2 | ||
| A0A087WVY3 F8WC37 F8WDC9 H7C596 H7C5A0 H7C5G4 H7C5P1 H7C5P4 H7C5Q7 H7C5S7 P35250 | ||||
| 5982 | ||||
| DNA replication Mismatch repair Nucleotide excision repair | ||||
8
|
YARS2 | ENSG00000139131 | tyrosyl-tRNA synthetase 2 | ||
| H0YHS6 Q9Y2Z4 | ||||
| 51067 | ||||
| Aminoacyl-tRNA biosynthesis | ||||
9
|
THOC7 | ENSG00000163634 | THO complex 7 | ||
| A0A5S6STF9 F8WF22 H7C5E3 Q6I9Y2 | ||||
| 80145 | ||||
| RNA transport | ||||
12
|
SNRPF | ENSG00000139343 | small nuclear ribonucleoprotein polypeptide F | ||
| A0A0B4J254 F8W0W6 P62306 | ||||
| 6636 | ||||
| Spliceosome | ||||
9
|
SART1 | ENSG00000175467 | spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP | ||
| E9PQI8 O43290 | ||||
| 9092 | ||||
| Spliceosome | ||||
10
|
ACTR6 | ENSG00000075089 | actin related protein 6 | ||
| F8VP72 F8VRL1 F8VSD1 F8W043 F8W057 F8W0Q1 G3V1Y1 Q9GZN1 | ||||
| 64431 | ||||
11
|
CDC40 | ENSG00000168438 | cell division cycle 40 | ||
| O60508 Q5SRN1 | ||||
| 51362 | ||||
| Spliceosome | ||||
12
|
SNRPD1 | ENSG00000167088 | small nuclear ribonucleoprotein D1 polypeptide | ||
| J3QLI9 J3QLR7 P62314 | ||||
| 6632 | ||||
| Spliceosome | ||||
9
|
ATP6V1D | ENSG00000100554 | ATPase H+ transporting V1 subunit D | ||
| G3V2S6 G3V2V6 G3V341 G3V3T8 G3V559 G3V5S7 H0YJ55 H0YJH8 H0YJS0 Q9Y5K8 | ||||
| 51382 | ||||
| Synaptic vesicle cycle mTOR signaling pathway | ||||
| Oxidative phosphorylation Phagosome | ||||
12
|
RIOK2 | ENSG00000058729 | RIO kinase 2 | ||
| D6RB96 H0Y8R4 H0Y919 Q9BVS4 | ||||
| 55781 | ||||
| Ribosome biogenesis in eukaryotes |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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jSquid_subnetworks.xml | 124.82 KB | |
H.sapiens_subnetwork.tsv | 13.64 KB |