- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000003756
- RNA binding motif prote…
- U2AF2
- U2 small nuclear RNA au…
- 1.000
- PPI
- SF1
- splicing factor 1
- 1.000
- PPI
- ZRSR2
- zinc finger CCCH-type, …
- 1.000
- PPI
- RBM17
- RNA binding motif prote…
- 1.000
- PPI
- DHX15
- DEAH-box helicase 15
- 1.000
- PPI
- PRPF8
- pre-mRNA processing fac…
- 1.000
- PPI
- U2SURP
- U2 snRNP associated SUR…
- 1.000
- PPI
- SNRNP200
- small nuclear ribonucle…
- 1.000
- PPI
- DDX17
- DEAD-box helicase 17
- 1.000
- PPI
- PRPF19
- pre-mRNA processing fac…
- 1.000
- PPI
- LSM8
- LSM8 homolog, U6 small …
- 0.999
- PPI
- RBM39
- RNA binding motif prote…
- 0.999
- Metabolic
- CHD4
- chromodomain helicase D…
- 0.999
- PPI
- DHX16
- DEAH-box helicase 16
- 0.997
- Metabolic
- LIG4
- DNA ligase 4
- 0.997
- PPI
- SF3B2
- splicing factor 3b subu…
- 0.997
- Metabolic
- SRRT
- serrate, RNA effector m…
- 0.997
- Metabolic
- WBP11
- WW domain binding prote…
- 0.997
- PPI
- PPWD1
- peptidylprolyl isomeras…
- 0.996
- Metabolic
- CHD3
- chromodomain helicase D…
- 0.996
- PPI
- SF3B1
- splicing factor 3b subu…
- 0.995
- Metabolic
- RBM14
- RNA binding motif prote…
- 0.994
- PPI
- COPS5
- COP9 signalosome subuni…
- 0.994
- PPI
- SF3A2
- splicing factor 3a subu…
- 0.993
- PPI
- EED
- embryonic ectoderm deve…
- 0.993
- Complex
- PRPF40B
- pre-mRNA processing fac…
- 0.993
- Metabolic
- DDX23
- DEAD-box helicase 23
- 0.993
- Metabolic
- ZDHHC17
- zinc finger DHHC-type p…
- 0.993
- PPI
- PRPF40A
- pre-mRNA processing fac…
- 0.992
- Metabolic
- DDX39B
- DExD-box helicase 39B
- 0.992
- Metabolic
ENSG00000003756
RNA binding motif protein 5
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- Ensembl
- UniProt
- NCBI
DDX17
DEAD-box helicase 17
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- Ensembl
- UniProt
- NCBI
LSM8
LSM8 homolog, U6 small nuclear RNA associated
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- Ensembl
- UniProt
- NCBI
CHD4
chromodomain helicase DNA binding protein 4
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- Ensembl
- UniProt
- A0A0C4DGG9
- A0A2R8Y212
- A0A2R8Y425
- A0A2R8Y4X2
- A0A2R8Y512
- A0A2R8Y521
- A0A2R8Y539
- A0A2R8Y5J0
- A0A2R8Y5M9
- A0A2R8Y5Z7
- A0A2R8Y685
- A0A2R8Y6G9
- A0A2R8Y795
- A0A2R8Y7I0
- A0A2R8Y7M9
- A0A2R8Y7X1
- A0A2R8Y8B3
- A0A2R8Y8C1
- A0A2R8YD40
- A0A2R8YDJ9
- A0A2R8YDW2
- A0A2R8YE38
- A0A2R8YER1
- A0A2R8YFD8
- A0A2R8YFK9
- A0A2U3TZM0
- F5GWX5
- F5H596
- F5H6N4
- Q14839
- NCBI
U2SURP
U2 snRNP associated SURP domain containing
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- Ensembl
- UniProt
- NCBI
DDX23
DEAD-box helicase 23
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- Ensembl
- UniProt
- NCBI
U2AF2
U2 small nuclear RNA auxiliary factor 2
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- Ensembl
- UniProt
- NCBI
WBP11
WW domain binding protein 11
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- Ensembl
- UniProt
- NCBI
SNRNP200
small nuclear ribonucleoprotein U5 subunit 200
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- Ensembl
- UniProt
- NCBI
DHX15
DEAH-box helicase 15
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- Ensembl
- UniProt
- NCBI
DHX16
DEAH-box helicase 16
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- Ensembl
- UniProt
- NCBI
RBM14
RNA binding motif protein 14
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- Ensembl
- UniProt
- NCBI
PRPF40A
pre-mRNA processing factor 40 homolog A
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- Ensembl
- UniProt
- NCBI
RBM17
RNA binding motif protein 17
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- Ensembl
- UniProt
- NCBI
SF3B1
splicing factor 3b subunit 1
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- Ensembl
- UniProt
- NCBI
PRPF19
pre-mRNA processing factor 19
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- Ensembl
- UniProt
- NCBI
DDX39B
DExD-box helicase 39B
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- Ensembl
- UniProt
- A0A0A0MT12
- F6QYI9
- F6R6M7
- F6S2B7
- F6S4E6
- F6SXL5
- F6TRA5
- F6U6E2
- F6UJC5
- F6WLT2
- H0Y400
- H0YCC6
- Q13838
- Q5STU3
- NCBI
PRPF40B
pre-mRNA processing factor 40 homolog B
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- Ensembl
- UniProt
- NCBI
SF3B2
splicing factor 3b subunit 2
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- Ensembl
- UniProt
- NCBI
SRRT
serrate, RNA effector molecule
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- Ensembl
- UniProt
- NCBI
COPS5
COP9 signalosome subunit 5
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- Ensembl
- UniProt
- NCBI
SF1
splicing factor 1
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- Ensembl
- UniProt
- NCBI
PRPF8
pre-mRNA processing factor 8
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- Ensembl
- UniProt
- NCBI
LIG4
DNA ligase 4
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- Add to current query
- Ensembl
- UniProt
- NCBI
PPWD1
peptidylprolyl isomerase domain and WD repeat containing 1
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- Ensembl
- UniProt
- NCBI
SF3A2
splicing factor 3a subunit 2
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- Ensembl
- UniProt
- NCBI
CHD3
chromodomain helicase DNA binding protein 3
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- Ensembl
- UniProt
- NCBI
ZDHHC17
zinc finger DHHC-type palmitoyltransferase 17
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- Ensembl
- UniProt
- NCBI
RBM39
RNA binding motif protein 39
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- Ensembl
- UniProt
- A0A087X122
- A0A0U1RQH7
- A0A0U1RQW2
- A8MYG5
- F2Z2Z5
- F2Z3E6
- F8WF24
- F8WF73
- G3XAC6
- H0Y4X3
- H0Y6I9
- H7BZG3
- Q14498
- Q5QP22
- Q5QP23
- NCBI
ZRSR2
zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2
- Use as query
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- Ensembl
- UniProt
- NCBI
EED
embryonic ectoderm development
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
23
|
DDX17 | ENSG00000100201 | DEAD-box helicase 17 | ||
| A0A0U1RQJ0 A0A1W2PQ51 A0A1X7SBZ2 A0A5H1ZRQ2 Q92841 | ||||
| 10521 | ||||
24
|
LSM8 | ENSG00000128534 | LSM8 homolog, U6 small nuclear RNA associated | ||
| C9JIZ0 C9JNV3 F2Z2Y6 O95777 | ||||
| 51691 | ||||
| RNA degradation Spliceosome | ||||
21
|
CHD4 | ENSG00000111642 | chromodomain helicase DNA binding protein 4 | ||
| A0A0C4DGG9 A0A2R8Y212 A0A2R8Y425 A0A2R8Y4X2 A0A2R8Y512 A0A2R8Y521 A0A2R8Y539 A0A2R8Y5J0 A0A2R8Y5M9 A0A2R8Y5Z7 A0A2R8Y685 A0A2R8Y6G9 A0A2R8Y795 A0A2R8Y7I0 A0A2R8Y7M9 A0A2R8Y7X1 A0A2R8Y8B3 A0A2R8Y8C1 A0A2R8YD40 A0A2R8YDJ9 A0A2R8YDW2 A0A2R8YE38 A0A2R8YER1 A0A2R8YFD8 A0A2R8YFK9 A0A2U3TZM0 F5GWX5 F5H596 F5H6N4 Q14839 | ||||
| 1108 | ||||
24
|
U2SURP | ENSG00000163714 | U2 snRNP associated SURP domain containing | ||
| C9J5L1 C9JDJ7 E7ET15 E7EW00 H0Y8D9 H7C4V2 O15042 U3KPT1 | ||||
| 23350 | ||||
| Spliceosome | ||||
29
|
DDX23 | ENSG00000174243 | DEAD-box helicase 23 | ||
| F8VVA2 F8W1J5 H0YI52 H0YIL9 Q9BUQ8 | ||||
| 9416 | ||||
| Spliceosome | ||||
25
|
U2AF2 | ENSG00000063244 | U2 small nuclear RNA auxiliary factor 2 | ||
| K7ELP8 K7ENG2 M0QYQ9 P26368 | ||||
| 11338 | ||||
| Spliceosome | ||||
17
|
WBP11 | ENSG00000084463 | WW domain binding protein 11 | ||
| F5GXS9 F5H5G4 Q9Y2W2 | ||||
| 51729 | ||||
| Spliceosome | ||||
26
|
SNRNP200 | ENSG00000144028 | small nuclear ribonucleoprotein U5 subunit 200 | ||
| A0A494C1A5 O75643 | ||||
| 23020 | ||||
| Spliceosome | ||||
28
|
DHX15 | ENSG00000109606 | DEAH-box helicase 15 | ||
| O43143 | ||||
| 1665 | ||||
| Spliceosome | ||||
28
|
DHX16 | ENSG00000204560 | DEAH-box helicase 16 | ||
| A2AB15 O60231 Q5SQH5 | ||||
| 8449 | ||||
| Spliceosome | ||||
14
|
RBM14 | ENSG00000239306 | RNA binding motif protein 14 | ||
| B8ZZ74 F8WDX3 Q96PK6 | ||||
| 100526737 10432 | ||||
26
|
PRPF40A | ENSG00000196504 | pre-mRNA processing factor 40 homolog A | ||
| A0A3F2YNY6 F5H578 H0YG38 H7BXZ7 H7C2N3 O75400 | ||||
| 55660 | ||||
| Spliceosome | ||||
23
|
RBM17 | ENSG00000134453 | RNA binding motif protein 17 | ||
| H0Y6J6 Q5W010 Q5W011 Q5W012 Q96I25 | ||||
| 84991 | ||||
| Spliceosome | ||||
25
|
SF3B1 | ENSG00000115524 | splicing factor 3b subunit 1 | ||
| A0A494C1M2 B4DGZ4 F8WC19 H7C341 O75533 | ||||
| 23451 | ||||
| Spliceosome | ||||
26
|
PRPF19 | ENSG00000110107 | pre-mRNA processing factor 19 | ||
| F5GY56 F5H2I0 H0YGF3 H0YGZ5 Q9UMS4 | ||||
| 27339 | ||||
| Spliceosome Ubiquitin mediated proteolysis | ||||
28
|
DDX39B | ENSG00000198563 | DExD-box helicase 39B | ||
| A0A0A0MT12 F6QYI9 F6R6M7 F6S2B7 F6S4E6 F6SXL5 F6TRA5 F6U6E2 F6UJC5 F6WLT2 H0Y400 H0YCC6 Q13838 Q5STU3 | ||||
| 7919 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
22
|
PRPF40B | ENSG00000110844 | pre-mRNA processing factor 40 homolog B | ||
| F8VU11 H0YII7 Q6NWY9 | ||||
| 25766 | ||||
| Spliceosome | ||||
26
|
SF3B2 | ENSG00000087365 | splicing factor 3b subunit 2 | ||
| E9PIL8 E9PJ04 E9PJT3 E9PPJ0 H0YCG1 H0YEX5 Q13435 | ||||
| 10992 | ||||
| Spliceosome | ||||
26
|
SRRT | ENSG00000087087 | serrate, RNA effector molecule | ||
| A0A087X0F4 A0A0A0MSP6 A0A286YEP7 C9JUL9 H7C0U8 H7C1K0 H7C3A1 Q9BXP5 | ||||
| 51593 | ||||
21
|
COPS5 | ENSG00000121022 | COP9 signalosome subunit 5 | ||
| E5RFS1 E5RG35 E5RHF2 E5RHH5 E5RK55 Q92905 | ||||
| 10987 | ||||
23
|
SF1 | ENSG00000168066 | splicing factor 1 | ||
| C9J792 F8WEG7 F8WEV5 H7BZT1 H7C0N4 H7C561 Q15637 | ||||
| 7536 | ||||
27
|
PRPF8 | ENSG00000174231 | pre-mRNA processing factor 8 | ||
| I3L0J9 I3L1T8 I3L3Z8 Q6P2Q9 | ||||
| 10594 | ||||
| Spliceosome | ||||
6
|
LIG4 | ENSG00000174405 | DNA ligase 4 | ||
| A0A0C4DGV9 P49917 | ||||
| 3981 | ||||
| Non-homologous end-joining | ||||
26
|
PPWD1 | ENSG00000113593 | peptidylprolyl isomerase domain and WD repeat containing 1 | ||
| D6R9Q1 D6RA12 D6RB19 D6RD43 D6RDA4 D6RHV0 F5H7P7 H0Y8N5 Q96BP3 | ||||
| 23398 | ||||
21
|
SF3A2 | ENSG00000104897 | splicing factor 3a subunit 2 | ||
| K7EMT0 Q15428 | ||||
| 8175 | ||||
| Spliceosome | ||||
8
|
CHD3 | ENSG00000170004 | chromodomain helicase DNA binding protein 3 | ||
| A0A5F9ZHM2 A0A5F9ZHX5 H7C0J3 H7C2H0 H7C3H7 I3L1I4 I3L229 K7EPV1 Q12873 | ||||
| 1107 | ||||
6
|
ZDHHC17 | ENSG00000186908 | zinc finger DHHC-type palmitoyltransferase 17 | ||
| F8VPW2 F8VUG7 F8VX48 H0YHF0 H0YHW0 H0YI74 H0YIK0 H0YIN1 H0YIP7 Q8IUH5 | ||||
| 23390 | ||||
25
|
RBM39 | ENSG00000131051 | RNA binding motif protein 39 | ||
| A0A087X122 A0A0U1RQH7 A0A0U1RQW2 A8MYG5 F2Z2Z5 F2Z3E6 F8WF24 F8WF73 G3XAC6 H0Y4X3 H0Y6I9 H7BZG3 Q14498 Q5QP22 Q5QP23 | ||||
| 9584 | ||||
15
|
ZRSR2 | ENSG00000169249 | zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 | ||
| A6NDW0 Q15696 | ||||
| 8233 | ||||
19
|
EED | ENSG00000074266 | embryonic ectoderm development | ||
| A0A5F9ZI63 E9PJK2 E9PMU3 H0YEL4 O75530 | ||||
| 8726 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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jSquid_subnetworks.xml | 331.36 KB | |
H.sapiens_subnetwork.tsv | 63.23 KB |