- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000265241
- RNA binding motif prote…
- MAGOH
- mago homolog, exon junc…
- 1.000
- PPI
- EIF4A3
- eukaryotic translation …
- 1.000
- PPI
- MAGOHB
- mago homolog B, exon ju…
- 1.000
- PPI
- ALYREF
- Aly/REF export factor
- 1.000
- PPI
- CASC3
- CASC3 exon junction com…
- 1.000
- PPI
- SRSF1
- serine and arginine ric…
- 1.000
- PPI
- RNPS1
- RNA binding protein wit…
- 1.000
- PPI
- DDX39B
- DExD-box helicase 39B
- 1.000
- PPI
- HNRNPA1
- heterogeneous nuclear r…
- 1.000
- PPI
- SAP18
- Sin3A associated protei…
- 1.000
- Complex
- RBM3
- RNA binding motif prote…
- 1.000
- PPI
- SRSF3
- serine and arginine ric…
- 1.000
- PPI
- PYM1
- PYM homolog 1, exon jun…
- 1.000
- PPI
- SRSF7
- serine and arginine ric…
- 1.000
- PPI
- NCBP2
- nuclear cap binding pro…
- 1.000
- PPI
- RPS16
- ribosomal protein S16
- 1.000
- PPI
- UPF2
- UPF2 regulator of nonse…
- 1.000
- PPI
- THOC7
- THO complex 7
- 1.000
- PPI
- UPF3B
- UPF3B regulator of nons…
- 1.000
- PPI
- UPF1
- UPF1 RNA helicase and A…
- 1.000
- PPI
- RNF113A
- ring finger protein 113A
- 1.000
- PPI
- SF3B2
- splicing factor 3b subu…
- 0.999
- Metabolic
- NXF1
- nuclear RNA export fact…
- 0.999
- PPI
- SNRNP40
- small nuclear ribonucle…
- 0.999
- Metabolic
- UPF3A
- UPF3A regulator of nons…
- 0.999
- PPI
- SRPK1
- SRSF protein kinase 1
- 0.999
- Complex
- RACK1
- receptor for activated …
- 0.999
- Metabolic
- SNRPD1
- small nuclear ribonucle…
- 0.998
- Metabolic
- PABPC1
- poly(A) binding protein…
- 0.998
- PPI
- RPL11
- ribosomal protein L11
- 0.998
- PPI
ENSG00000265241
RNA binding motif protein 8A
- Use as query
- Use pair as query
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- Ensembl
- UniProt
- NCBI
SRSF3
serine and arginine rich splicing factor 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SAP18
Sin3A associated protein 18
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- Ensembl
- UniProt
- NCBI
NXF1
nuclear RNA export factor 1
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- Ensembl
- UniProt
- NCBI
SRSF1
serine and arginine rich splicing factor 1
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- Add to current query
- Ensembl
- UniProt
- NCBI
HNRNPA1
heterogeneous nuclear ribonucleoprotein A1
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- Ensembl
- UniProt
- NCBI
SNRNP40
small nuclear ribonucleoprotein U5 subunit 40
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ALYREF
Aly/REF export factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RNPS1
RNA binding protein with serine rich domain 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- H3BMM9
- H3BMS0
- H3BNI3
- H3BNU7
- H3BP82
- H3BPG5
- H3BRK4
- H3BTC0
- H3BTR6
- H3BTV0
- H3BTY0
- H3BUG0
- H3BUL0
- H3BV80
- Q15287
- NCBI
UPF2
UPF2 regulator of nonsense mediated mRNA decay
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- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDX39B
DExD-box helicase 39B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A0A0MT12
- F6QYI9
- F6R6M7
- F6S2B7
- F6S4E6
- F6SXL5
- F6TRA5
- F6U6E2
- F6UJC5
- F6WLT2
- H0Y400
- H0YCC6
- Q13838
- Q5STU3
- NCBI
NCBP2
nuclear cap binding protein subunit 2
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- Ensembl
- UniProt
- NCBI
MAGOHB
mago homolog B, exon junction complex subunit
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
RNF113A
ring finger protein 113A
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- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RACK1
receptor for activated C kinase 1
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- Add to current query
- Ensembl
- UniProt
- D6R909
- D6R9L0
- D6R9Z1
- D6RAC2
- D6RAU2
- D6RBD0
- D6RDI0
- D6REE5
- D6RF23
- D6RFX4
- D6RFZ9
- D6RGK8
- D6RHH4
- D6RHJ5
- E9PD14
- H0Y8R5
- H0Y8W2
- H0Y9P0
- H0YAF8
- H0YAM7
- J3KPE3
- P63244
- NCBI
EIF4A3
eukaryotic translation initiation factor 4A3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPS16
ribosomal protein S16
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PABPC1
poly(A) binding protein cytoplasmic 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A087WTT1
- E5RFD8
- E5RGC4
- E5RGH3
- E5RH24
- E5RHG7
- E5RJB9
- E5RJM8
- E7EQV3
- E7ERJ7
- H0YAP2
- H0YAR2
- H0YAS6
- H0YAS7
- H0YAW6
- H0YB75
- H0YB86
- H0YBN4
- H0YC10
- P11940
- NCBI
SRSF7
serine and arginine rich splicing factor 7
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
UPF1
UPF1 RNA helicase and ATPase
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
UPF3B
UPF3B regulator of nonsense mediated mRNA decay
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
CASC3
CASC3 exon junction complex subunit
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPD1
small nuclear ribonucleoprotein D1 polypeptide
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
MAGOH
mago homolog, exon junction complex subunit
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPL11
ribosomal protein L11
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM3
RNA binding motif protein 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SF3B2
splicing factor 3b subunit 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
UPF3A
UPF3A regulator of nonsense mediated mRNA decay
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
THOC7
THO complex 7
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PYM1
PYM homolog 1, exon junction complex associated factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000265241 | ENSG00000265241 | RNA binding motif protein 8A | ||
| A0A0J9YW13 Q9Y5S9 | ||||
| 9939 | ||||
| Spliceosome RNA transport mRNA surveillance pathway |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
21
|
SRSF3 | ENSG00000112081 | serine and arginine rich splicing factor 3 | ||
| A0A087X2D0 P84103 | ||||
| 6428 | ||||
| Spliceosome | ||||
24
|
SAP18 | ENSG00000150459 | Sin3A associated protein 18 | ||
| H7BZW6 O00422 U3KPY7 U3KQ12 | ||||
| 10284 | ||||
| RNA transport mRNA surveillance pathway | ||||
23
|
NXF1 | ENSG00000162231 | nuclear RNA export factor 1 | ||
| B4E227 E9PIN3 E9PLA7 E9PMV7 E9PQA4 H0YDU0 Q9UBU9 | ||||
| 10482 | ||||
| Ribosome biogenesis in eukaryotes RNA transport mRNA surveillance pathway | ||||
23
|
SRSF1 | ENSG00000136450 | serine and arginine rich splicing factor 1 | ||
| J3KSR8 J3KSW7 J3KTL2 J3QQV5 Q07955 | ||||
| 6426 | ||||
| IL-17 signaling pathway | ||||
| Spliceosome | ||||
26
|
HNRNPA1 | ENSG00000135486 | heterogeneous nuclear ribonucleoprotein A1 | ||
| F8VTQ5 F8VYN5 F8VZ49 F8W646 F8W6I7 H0YH80 P09651 | ||||
| 3178 | ||||
| Spliceosome | ||||
24
|
SNRNP40 | ENSG00000060688 | small nuclear ribonucleoprotein U5 subunit 40 | ||
| Q96DI7 Q9NSS8 | ||||
| 9410 | ||||
| Spliceosome | ||||
28
|
ALYREF | ENSG00000183684 | Aly/REF export factor | ||
| E9PB61 Q86V81 | ||||
| 10189 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
27
|
RNPS1 | ENSG00000205937 | RNA binding protein with serine rich domain 1 | ||
| H3BMM9 H3BMS0 H3BNI3 H3BNU7 H3BP82 H3BPG5 H3BRK4 H3BTC0 H3BTR6 H3BTV0 H3BTY0 H3BUG0 H3BUL0 H3BV80 Q15287 | ||||
| 10921 | ||||
| RNA transport mRNA surveillance pathway | ||||
19
|
UPF2 | ENSG00000151461 | UPF2 regulator of nonsense mediated mRNA decay | ||
| Q9HAU5 | ||||
| 26019 | ||||
28
|
DDX39B | ENSG00000198563 | DExD-box helicase 39B | ||
| A0A0A0MT12 F6QYI9 F6R6M7 F6S2B7 F6S4E6 F6SXL5 F6TRA5 F6U6E2 F6UJC5 F6WLT2 H0Y400 H0YCC6 Q13838 Q5STU3 | ||||
| 7919 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
26
|
NCBP2 | ENSG00000114503 | nuclear cap binding protein subunit 2 | ||
| B3KSB0 C9JKF4 C9JQX9 F8WE41 P52298 | ||||
| 22916 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
21
|
MAGOHB | ENSG00000111196 | mago homolog B, exon junction complex subunit | ||
| F5H124 F5H3U9 F5H6N1 F5H6P7 Q96A72 | ||||
| 55110 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
20
|
RNF113A | ENSG00000125352 | ring finger protein 113A | ||
| O15541 | ||||
| 7737 | ||||
25
|
RACK1 | ENSG00000204628 | receptor for activated C kinase 1 | ||
| D6R909 D6R9L0 D6R9Z1 D6RAC2 D6RAU2 D6RBD0 D6RDI0 D6REE5 D6RF23 D6RFX4 D6RFZ9 D6RGK8 D6RHH4 D6RHJ5 E9PD14 H0Y8R5 H0Y8W2 H0Y9P0 H0YAF8 H0YAM7 J3KPE3 P63244 | ||||
| 10399 | ||||
30
|
EIF4A3 | ENSG00000141543 | eukaryotic translation initiation factor 4A3 | ||
| I3L3H2 P38919 | ||||
| 9775 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
24
|
RPS16 | ENSG00000105193 | ribosomal protein S16 | ||
| M0QX76 M0R1M5 M0R210 M0R3H0 P62249 Q6IPX4 | ||||
| 6217 | ||||
| Ribosome | ||||
23
|
PABPC1 | ENSG00000070756 | poly(A) binding protein cytoplasmic 1 | ||
| A0A087WTT1 E5RFD8 E5RGC4 E5RGH3 E5RH24 E5RHG7 E5RJB9 E5RJM8 E7EQV3 E7ERJ7 H0YAP2 H0YAR2 H0YAS6 H0YAS7 H0YAW6 H0YB75 H0YB86 H0YBN4 H0YC10 P11940 | ||||
| 26986 | ||||
| RNA degradation RNA transport mRNA surveillance pathway | ||||
23
|
SRSF7 | ENSG00000115875 | serine and arginine rich splicing factor 7 | ||
| A0A0B4J1Z1 C9JAB2 F8WEA1 H7BZZ6 H7C1N1 Q16629 | ||||
| 6432 | ||||
| Spliceosome | ||||
22
|
UPF1 | ENSG00000005007 | UPF1 RNA helicase and ATPase | ||
| Q92900 | ||||
| 5976 | ||||
| RNA transport mRNA surveillance pathway | ||||
20
|
UPF3B | ENSG00000125351 | UPF3B regulator of nonsense mediated mRNA decay | ||
| A0A087WYC8 A0A1B0GVA2 Q9BZI7 | ||||
| 65109 | ||||
| RNA transport mRNA surveillance pathway | ||||
17
|
CASC3 | ENSG00000108349 | CASC3 exon junction complex subunit | ||
| J3KSY7 J3QSC4 K7EQ38 O15234 | ||||
| 22794 | ||||
| RNA transport mRNA surveillance pathway | ||||
25
|
SNRPD1 | ENSG00000167088 | small nuclear ribonucleoprotein D1 polypeptide | ||
| J3QLI9 J3QLR7 P62314 | ||||
| 6632 | ||||
| Spliceosome | ||||
30
|
MAGOH | ENSG00000162385 | mago homolog, exon junction complex subunit | ||
| P61326 | ||||
| 4116 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
26
|
RPL11 | ENSG00000142676 | ribosomal protein L11 | ||
| A0A2R8Y447 P62913 Q5VVC8 | ||||
| 6135 | ||||
| Ribosome | ||||
14
|
RBM3 | ENSG00000102317 | RNA binding motif protein 3 | ||
| P98179 Q9H5V0 | ||||
| 5935 | ||||
28
|
SF3B2 | ENSG00000087365 | splicing factor 3b subunit 2 | ||
| E9PIL8 E9PJ04 E9PJT3 E9PPJ0 H0YCG1 H0YEX5 Q13435 | ||||
| 10992 | ||||
| Spliceosome | ||||
17
|
UPF3A | ENSG00000169062 | UPF3A regulator of nonsense mediated mRNA decay | ||
| A0A087WZ33 Q9H1J1 | ||||
| 65110 | ||||
| RNA transport mRNA surveillance pathway | ||||
18
|
THOC7 | ENSG00000163634 | THO complex 7 | ||
| A0A5S6STF9 F8WF22 H7C5E3 Q6I9Y2 | ||||
| 80145 | ||||
| RNA transport | ||||
13
|
PYM1 | ENSG00000170473 | PYM homolog 1, exon junction complex associated factor | ||
| F8VT68 F8VXH2 G3V5P2 H0YJW5 Q9BRP8 | ||||
| 84305 | ||||
| RNA transport mRNA surveillance pathway | ||||
23
|
SRPK1 | ENSG00000096063 | SRSF protein kinase 1 | ||
| D6RB98 D6RBF8 D6RBM8 D6RDZ3 H0Y932 H3BLV9 Q96SB4 | ||||
| 6732 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
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jSquid_subnetworks.xml | 333.01 KB | |
H.sapiens_subnetwork.tsv | 65.36 KB |