- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000254806
- SYS1-DBNDD2 readthrough…
- RER1
- retention in endoplasmi…
- 0.956
- Metabolic
- STX16
- syntaxin 16
- 0.900
- Metabolic
- TEX261
- testis expressed 261
- 0.879
- Metabolic
- BCAP31
- B cell receptor associa…
- 0.876
- Metabolic
- UNC50
- unc-50 inner nuclear me…
- 0.816
- PPI
- LSM8
- LSM8 homolog, U6 small …
- 0.771
- Metabolic
- RAB6A
- RAB6A, member RAS oncog…
- 0.721
- Metabolic
- BET1
- Bet1 golgi vesicular me…
- 0.685
- Metabolic
- TVP23C
- trans-golgi network ves…
- 0.679
- PPI
- RAB10
- RAB10, member RAS oncog…
- 0.658
- Metabolic
- SLC35B1
- solute carrier family 3…
- 0.647
- Metabolic
- TVP23B
- trans-golgi network ves…
- 0.634
- PPI
- SEC24B
- SEC24 homolog B, COPII …
- 0.632
- PPI
- PGAP2
- post-GPI attachment to …
- 0.626
- PPI
- RAB8A
- RAB8A, member RAS oncog…
- 0.611
- Metabolic
- TVP23A
- trans-golgi network ves…
- 0.585
- PPI
- SEC24A
- SEC24 homolog A, COPII …
- 0.581
- PPI
- YIF1B
- Yip1 interacting factor…
- 0.570
- Metabolic
- YIF1A
- Yip1 interacting factor…
- 0.554
- Metabolic
- ZDHHC20
- zinc finger DHHC-type p…
- 0.551
- Metabolic
- RAB6B
- RAB6B, member RAS oncog…
- 0.531
- Metabolic
- ARFRP1
- ADP ribosylation factor…
- 0.513
- Metabolic
- ZNHIT1
- zinc finger HIT-type co…
- 0.512
- Metabolic
- AP1S2
- adaptor related protein…
- 0.506
- PPI
- SEC23B
- SEC23 homolog B, COPII …
- 0.462
- PPI
- AP1S1
- adaptor related protein…
- 0.461
- Metabolic
- LSM6
- LSM6 homolog, U6 small …
- 0.441
- Metabolic
- TMEM87B
- transmembrane protein 8…
- 0.441
- PPI
- EMC3
- ER membrane protein com…
- 0.429
- PPI
- GOLT1A
- golgi transport 1A
- 0.423
- Metabolic
ENSG00000254806
SYS1-DBNDD2 readthrough (NMD candidate)
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TVP23B
trans-golgi network vesicle protein 23 homolog B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
YIF1B
Yip1 interacting factor homolog B, membrane trafficking protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SEC24A
SEC24 homolog A, COPII coat complex component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PGAP2
post-GPI attachment to proteins 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RER1
retention in endoplasmic reticulum sorting receptor 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
YIF1A
Yip1 interacting factor homolog A, membrane trafficking protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TEX261
testis expressed 261
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SEC24B
SEC24 homolog B, COPII coat complex component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
AP1S1
adaptor related protein complex 1 subunit sigma 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SEC23B
SEC23 homolog B, COPII coat complex component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RAB6B
RAB6B, member RAS oncogene family
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BET1
Bet1 golgi vesicular membrane trafficking protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RAB6A
RAB6A, member RAS oncogene family
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EMC3
ER membrane protein complex subunit 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM8
LSM8 homolog, U6 small nuclear RNA associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
UNC50
unc-50 inner nuclear membrane RNA binding protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TVP23A
trans-golgi network vesicle protein 23 homolog A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SLC35B1
solute carrier family 35 member B1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
STX16
syntaxin 16
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ZDHHC20
zinc finger DHHC-type palmitoyltransferase 20
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TVP23C
trans-golgi network vesicle protein 23 homolog C
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ZNHIT1
zinc finger HIT-type containing 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BCAP31
B cell receptor associated protein 31
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
GOLT1A
golgi transport 1A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
AP1S2
adaptor related protein complex 1 subunit sigma 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TMEM87B
transmembrane protein 87B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RAB8A
RAB8A, member RAS oncogene family
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RAB10
RAB10, member RAS oncogene family
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ARFRP1
ADP ribosylation factor related protein 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000254806 | ENSG00000254806 | SYS1-DBNDD2 readthrough (NMD candidate) | ||
| F2Z2A3 H3BUS1 |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
17
|
TVP23B | ENSG00000171928 | trans-golgi network vesicle protein 23 homolog B | ||
| E5RIS5 I3L376 J3KS67 J3QL63 K7ENL4 Q9NYZ1 | ||||
| 100533496 201158 51030 | ||||
26
|
YIF1B | ENSG00000167645 | Yip1 interacting factor homolog B, membrane trafficking protein | ||
| K7EJQ6 K7EPQ7 K7ERQ0 K7ERY2 Q5BJH7 | ||||
| 90522 | ||||
16
|
SEC24A | ENSG00000113615 | SEC24 homolog A, COPII coat complex component | ||
| H0Y9J6 O95486 | ||||
| 10802 | ||||
| Protein processing in endoplasmic reticulum | ||||
3
|
PGAP2 | ENSG00000148985 | post-GPI attachment to proteins 2 | ||
| A0A0A0MS75 A8MYS5 A8MZF5 B7Z2X5 E9PKT0 E9PQ19 E9PRZ2 H0YCQ4 H0YDC6 H0YDJ5 H0YDQ4 H0YEE9 Q9UHJ9 | ||||
| 27315 | ||||
26
|
RER1 | ENSG00000157916 | retention in endoplasmic reticulum sorting receptor 1 | ||
| A0A0A0MR06 O15258 Q5T091 Q5T092 Q5T093 | ||||
| 11079 | ||||
27
|
YIF1A | ENSG00000174851 | Yip1 interacting factor homolog A, membrane trafficking protein | ||
| A6NGW1 C9JST7 E9PIZ0 E9PK42 E9PP02 E9PS11 O95070 | ||||
| 10897 | ||||
16
|
TEX261 | ENSG00000144043 | testis expressed 261 | ||
| F8WAR8 Q6UWH6 | ||||
| 113419 | ||||
13
|
SEC24B | ENSG00000138802 | SEC24 homolog B, COPII coat complex component | ||
| O95487 | ||||
| 10427 | ||||
| Protein processing in endoplasmic reticulum | ||||
14
|
AP1S1 | ENSG00000106367 | adaptor related protein complex 1 subunit sigma 1 | ||
| A0A2R8Y7S3 A0A2R8YGH5 H7C1E4 P61966 | ||||
| 1174 | ||||
| Lysosome | ||||
20
|
SEC23B | ENSG00000101310 | SEC23 homolog B, COPII coat complex component | ||
| A0A2R8Y633 A0A2R8Y7S7 A0A2R8YF30 A0A2R8YFH5 Q15437 Q5QPE1 Q5QPE2 | ||||
| 10483 | ||||
| Protein processing in endoplasmic reticulum | ||||
16
|
RAB6B | ENSG00000154917 | RAB6B, member RAS oncogene family | ||
| C9J0I2 C9JB90 C9JU14 J3KR73 Q9NRW1 | ||||
| 51560 | ||||
20
|
BET1 | ENSG00000105829 | Bet1 golgi vesicular membrane trafficking protein | ||
| A0A3B3IU16 C9JTT8 H7C1N3 O15155 Q68DU7 | ||||
| 10282 | ||||
| SNARE interactions in vesicular transport | ||||
| SNARE interactions in vesicular transport | ||||
22
|
RAB6A | ENSG00000175582 | RAB6A, member RAS oncogene family | ||
| F5GX61 F5H3K7 P20340 | ||||
| 5870 | ||||
14
|
EMC3 | ENSG00000125037 | ER membrane protein complex subunit 3 | ||
| C9JLM9 Q9P0I2 S4R3U9 | ||||
| 55831 | ||||
8
|
LSM8 | ENSG00000128534 | LSM8 homolog, U6 small nuclear RNA associated | ||
| C9JIZ0 C9JNV3 F2Z2Y6 O95777 | ||||
| 51691 | ||||
| RNA degradation Spliceosome | ||||
14
|
UNC50 | ENSG00000115446 | unc-50 inner nuclear membrane RNA binding protein | ||
| H7BYK3 H7C3J5 J3KQ47 Q53HI1 | ||||
| 25972 | ||||
12
|
TVP23A | ENSG00000166676 | trans-golgi network vesicle protein 23 homolog A | ||
| A0A087WYU4 A6NH52 I3L109 I3L3Y3 I3L488 | ||||
| 780776 | ||||
19
|
SLC35B1 | ENSG00000121073 | solute carrier family 35 member B1 | ||
| D6R981 D6R9G9 D6RB73 D6RDY9 D6RE58 D6RF81 D6RG34 D6RHG0 P78383 | ||||
| 10237 | ||||
18
|
STX16 | ENSG00000124222 | syntaxin 16 | ||
| B7ZBM4 B7ZBM5 B7ZBM8 E9PLV7 E9PND6 F8W9Z6 H0YEW0 O14662 Q96NX8 | ||||
| 8675 | ||||
| SNARE interactions in vesicular transport | ||||
| SNARE interactions in vesicular transport | ||||
18
|
ZDHHC20 | ENSG00000180776 | zinc finger DHHC-type palmitoyltransferase 20 | ||
| A0A0D9SEN4 B4DRN8 Q5W0Z9 | ||||
| 253832 | ||||
10
|
TVP23C | ENSG00000175106 | trans-golgi network vesicle protein 23 homolog C | ||
| C9JPH1 C9JYS5 E5RGC5 E5RIS5 J3QL47 K7EK95 Q96ET8 | ||||
| 100533496 201158 51030 | ||||
2
|
ZNHIT1 | ENSG00000106400 | zinc finger HIT-type containing 1 | ||
| O43257 | ||||
| 10467 | ||||
18
|
BCAP31 | ENSG00000185825 | B cell receptor associated protein 31 | ||
| A0A2R8Y5M6 C9J0M4 C9JM14 C9JMD7 C9JQ75 C9JSP1 P51572 | ||||
| 10134 | ||||
| Protein processing in endoplasmic reticulum | ||||
9
|
GOLT1A | ENSG00000174567 | golgi transport 1A | ||
| Q6ZVE7 | ||||
| 127845 | ||||
17
|
AP1S2 | ENSG00000182287 | adaptor related protein complex 1 subunit sigma 2 | ||
| A0A5F9ZHW1 A0A5F9ZHX2 A0A5F9ZI43 A6NH01 F6SFB5 H0Y673 H7BZG6 P56377 | ||||
| 8905 | ||||
| Lysosome | ||||
13
|
LSM6 | ENSG00000164167 | LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| P62312 | ||||
| 11157 | ||||
| RNA degradation Spliceosome | ||||
11
|
TMEM87B | ENSG00000153214 | transmembrane protein 87B | ||
| A0A3B3IU29 A0A494BZZ8 H7C0B3 H7C1G1 Q96K49 | ||||
| 84910 | ||||
14
|
RAB8A | ENSG00000167461 | RAB8A, member RAS oncogene family | ||
| P61006 | ||||
| 4218 | ||||
| Tight junction AMPK signaling pathway | ||||
| Endocytosis Autophagy - animal | ||||
18
|
RAB10 | ENSG00000084733 | RAB10, member RAS oncogene family | ||
| P61026 | ||||
| 10890 | ||||
| AMPK signaling pathway | ||||
| Endocytosis | ||||
5
|
ARFRP1 | ENSG00000101246 | ADP ribosylation factor related protein 1 | ||
| Q13795 | ||||
| 10139 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
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jSquid_subnetworks.xml | 259.96 KB | |
H.sapiens_subnetwork.tsv | 44.67 KB |