- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000242372
- eukaryotic translation …
- RPL23
- ribosomal protein L23
- 1.000
- Metabolic
- PUM3
- pumilio RNA binding fam…
- 1.000
- Complex
- GNL3
- G protein nucleolar 3
- 1.000
- Complex
- GTPBP4
- GTP binding protein 4
- 1.000
- PPI
- RPS3
- ribosomal protein S3
- 1.000
- PPI
- RPL5
- ribosomal protein L5
- 1.000
- PPI
- RPF2
- ribosome production fac…
- 1.000
- PPI
- NMD3
- NMD3 ribosome export ad…
- 1.000
- Complex
- TUFM
- Tu translation elongati…
- 1.000
- PPI
- RPS11
- ribosomal protein S11
- 1.000
- Metabolic
- NIP7
- nucleolar pre-rRNA proc…
- 1.000
- Complex
- PABPC4
- poly(A) binding protein…
- 1.000
- Complex
- RPL26
- ribosomal protein L26
- 1.000
- Complex
- MRTO4
- MRT4 homolog, ribosome …
- 1.000
- PPI
- PES1
- pescadillo ribosomal bi…
- 1.000
- PPI
- RPL34
- ribosomal protein L34
- 1.000
- PPI
- NSA2
- NSA2 ribosome biogenesi…
- 1.000
- PPI
- WDR12
- WD repeat domain 12
- 1.000
- PPI
- ZNF622
- zinc finger protein 622
- 1.000
- PPI
- FTSJ3
- FtsJ RNA 2'-O-methyltra…
- 1.000
- Complex
- SEC13
- SEC13 homolog, nuclear …
- 1.000
- PPI
- RPS4X
- ribosomal protein S4 X-…
- 1.000
- Complex
- BOP1
- BOP1 ribosomal biogenes…
- 1.000
- PPI
- BRIX1
- biogenesis of ribosomes…
- 1.000
- PPI
- RRP15
- ribosomal RNA processin…
- 1.000
- PPI
- EIF4E
- eukaryotic translation …
- 1.000
- PPI
- RPS8
- ribosomal protein S8
- 1.000
- Metabolic
- EIF3B
- eukaryotic translation …
- 1.000
- Metabolic
- RACK1
- receptor for activated …
- 1.000
- Complex
- RPF1
- ribosome production fac…
- 1.000
- PPI
ENSG00000242372
eukaryotic translation initiation factor 6
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SEC13
SEC13 homolog, nuclear pore and COPII coat complex component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NMD3
NMD3 ribosome export adaptor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EIF3B
eukaryotic translation initiation factor 3 subunit B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PUM3
pumilio RNA binding family member 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPS11
ribosomal protein S11
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPL34
ribosomal protein L34
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BRIX1
biogenesis of ribosomes BRX1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPL23
ribosomal protein L23
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPF1
ribosome production factor 1 homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BOP1
BOP1 ribosomal biogenesis factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
MRTO4
MRT4 homolog, ribosome maturation factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RRP15
ribosomal RNA processing 15 homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ZNF622
zinc finger protein 622
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PABPC4
poly(A) binding protein cytoplasmic 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
GTPBP4
GTP binding protein 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
GNL3
G protein nucleolar 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPS8
ribosomal protein S8
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPS3
ribosomal protein S3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EIF4E
eukaryotic translation initiation factor 4E
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RACK1
receptor for activated C kinase 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- D6R909
- D6R9L0
- D6R9Z1
- D6RAC2
- D6RAU2
- D6RBD0
- D6RDI0
- D6REE5
- D6RF23
- D6RFX4
- D6RFZ9
- D6RGK8
- D6RHH4
- D6RHJ5
- E9PD14
- H0Y8R5
- H0Y8W2
- H0Y9P0
- H0YAF8
- H0YAM7
- J3KPE3
- P63244
- NCBI
PES1
pescadillo ribosomal biogenesis factor 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
WDR12
WD repeat domain 12
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NSA2
NSA2 ribosome biogenesis factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPS4X
ribosomal protein S4 X-linked
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPL26
ribosomal protein L26
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPF2
ribosome production factor 2 homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NIP7
nucleolar pre-rRNA processing protein NIP7
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TUFM
Tu translation elongation factor, mitochondrial
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPL5
ribosomal protein L5
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000242372 | ENSG00000242372 | eukaryotic translation initiation factor 6 | ||
| A0A0B4J1Y7 B7ZBH1 F8WD20 F8WDS6 P56537 | ||||
| 3692 | ||||
| Ribosome biogenesis in eukaryotes |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
29
|
SEC13 | ENSG00000157020 | SEC13 homolog, nuclear pore and COPII coat complex component | ||
| A8MXL6 C9J0S2 C9JBJ5 C9JIB6 E7ERC8 P55735 | ||||
| 6396 | ||||
| mTOR signaling pathway | ||||
| Protein processing in endoplasmic reticulum RNA transport | ||||
30
|
NMD3 | ENSG00000169251 | NMD3 ribosome export adaptor | ||
| C9IY70 C9IZW9 C9J0B9 C9JA08 C9K0C2 Q96D46 | ||||
| 51068 | ||||
| Ribosome biogenesis in eukaryotes RNA transport | ||||
30
|
EIF3B | ENSG00000106263 | eukaryotic translation initiation factor 3 subunit B | ||
| C9JQN7 C9JZG1 P55884 | ||||
| 8662 | ||||
| RNA transport | ||||
29
|
PUM3 | ENSG00000080608 | pumilio RNA binding family member 3 | ||
| Q15397 S4R3K8 | ||||
| 9933 | ||||
30
|
FTSJ3 | ENSG00000108592 | FtsJ RNA 2'-O-methyltransferase 3 | ||
| J3KRY4 J3KS36 J3KS74 J3QKT6 J3QR05 J3QRS5 J3QSE2 Q8IY81 | ||||
| 117246 | ||||
30
|
RPS11 | ENSG00000142534 | ribosomal protein S11 | ||
| M0QZ90 M0QZC5 M0R1H5 M0R1H6 P62280 | ||||
| 6205 | ||||
| Ribosome | ||||
30
|
RPL34 | ENSG00000109475 | ribosomal protein L34 | ||
| P49207 | ||||
| 6164 | ||||
| Ribosome | ||||
30
|
BRIX1 | ENSG00000113460 | biogenesis of ribosomes BRX1 | ||
| Q8TDN6 | ||||
| 55299 | ||||
30
|
RPL23 | ENSG00000125691 | ribosomal protein L23 | ||
| B9ZVP7 C9JD32 J3KT29 J3KTJ3 J3QQT9 P62829 | ||||
| 9349 | ||||
| Ribosome | ||||
27
|
RPF1 | ENSG00000117133 | ribosome production factor 1 homolog | ||
| Q9H9Y2 X6R7Q1 | ||||
| 80135 | ||||
30
|
BOP1 | ENSG00000261236 | BOP1 ribosomal biogenesis factor | ||
| A0A075B729 Q14137 | ||||
| 23246 | ||||
30
|
MRTO4 | ENSG00000053372 | MRT4 homolog, ribosome maturation factor | ||
| Q9UKD2 | ||||
| 51154 | ||||
30
|
RRP15 | ENSG00000067533 | ribosomal RNA processing 15 homolog | ||
| Q9Y3B9 | ||||
| 51018 | ||||
29
|
ZNF622 | ENSG00000173545 | zinc finger protein 622 | ||
| Q969S3 | ||||
| 90441 | ||||
29
|
PABPC4 | ENSG00000090621 | poly(A) binding protein cytoplasmic 4 | ||
| B1ANR0 B1ANR1 H0Y5F5 H0Y6X6 H0YCC8 H0YEQ8 H0YER0 H0YEU6 Q13310 | ||||
| 8761 | ||||
| RNA degradation RNA transport mRNA surveillance pathway | ||||
30
|
GTPBP4 | ENSG00000107937 | GTP binding protein 4 | ||
| Q5T3R7 Q9BZE4 | ||||
| 23560 | ||||
| Ribosome biogenesis in eukaryotes | ||||
28
|
GNL3 | ENSG00000163938 | G protein nucleolar 3 | ||
| B4DMU5 C9JYH9 C9JZT7 Q9BVP2 | ||||
| 26354 | ||||
| Ribosome biogenesis in eukaryotes | ||||
30
|
RPS8 | ENSG00000142937 | ribosomal protein S8 | ||
| P62241 Q5JR95 | ||||
| 6202 | ||||
| Ribosome | ||||
30
|
RPS3 | ENSG00000149273 | ribosomal protein S3 | ||
| E9PJH4 E9PJN9 E9PK82 E9PL09 E9PPU1 E9PQ96 E9PQX2 E9PSF4 F2Z2S8 H0YCJ7 H0YES8 H0YEU2 H0YF32 P23396 | ||||
| 6188 | ||||
| Ribosome | ||||
28
|
EIF4E | ENSG00000151247 | eukaryotic translation initiation factor 4E | ||
| D6RBW1 D6RFJ3 H0Y8J7 P06730 | ||||
| 1977 | ||||
| HIF-1 signaling pathway PI3K-Akt signaling pathway mTOR signaling pathway Insulin signaling pathway | ||||
| RNA transport | ||||
30
|
RACK1 | ENSG00000204628 | receptor for activated C kinase 1 | ||
| D6R909 D6R9L0 D6R9Z1 D6RAC2 D6RAU2 D6RBD0 D6RDI0 D6REE5 D6RF23 D6RFX4 D6RFZ9 D6RGK8 D6RHH4 D6RHJ5 E9PD14 H0Y8R5 H0Y8W2 H0Y9P0 H0YAF8 H0YAM7 J3KPE3 P63244 | ||||
| 10399 | ||||
30
|
PES1 | ENSG00000100029 | pescadillo ribosomal biogenesis factor 1 | ||
| B3KXD6 B5MCF9 H7BYY8 H7C267 O00541 | ||||
| 23481 | ||||
29
|
WDR12 | ENSG00000138442 | WD repeat domain 12 | ||
| Q9GZL7 | ||||
| 55759 | ||||
30
|
NSA2 | ENSG00000164346 | NSA2 ribosome biogenesis factor | ||
| A0A0A0MQZ6 H0YAI9 O95478 | ||||
| 10412 | ||||
30
|
RPS4X | ENSG00000198034 | ribosomal protein S4 X-linked | ||
| P62701 | ||||
| 6191 | ||||
| Ribosome | ||||
30
|
RPL26 | ENSG00000161970 | ribosomal protein L26 | ||
| J3KS10 J3KSS0 J3QQV1 J3QRC4 J3QRI7 P61254 | ||||
| 6154 | ||||
| Ribosome | ||||
30
|
RPF2 | ENSG00000197498 | ribosome production factor 2 homolog | ||
| Q5VXM9 Q5VXN0 Q9H7B2 U3KQN5 | ||||
| 84154 | ||||
30
|
NIP7 | ENSG00000132603 | nucleolar pre-rRNA processing protein NIP7 | ||
| J3QLW7 J3QRD6 J3QRR4 Q9Y221 | ||||
| 51388 | ||||
26
|
TUFM | ENSG00000178952 | Tu translation elongation factor, mitochondrial | ||
| H3BNU3 P49411 | ||||
| 7284 | ||||
30
|
RPL5 | ENSG00000122406 | ribosomal protein L5 | ||
| A0A2R8Y4A2 A0A2R8Y6J3 P46777 Q5T7N0 R4GNJ2 | ||||
| 6125 | ||||
| Ribosome |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
- Add to current query
jSquid_subnetworks.xml | 352.10 KB | |
H.sapiens_subnetwork.tsv | 91.06 KB |