- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000234857
- HNRNPUL2-BSCL2 readthro…
- TOP1
- DNA topoisomerase I
- 0.983
- PPI
- SF3B6
- splicing factor 3b subu…
- 0.975
- Complex
- HNRNPH1
- heterogeneous nuclear r…
- 0.935
- PPI
- EEF2
- eukaryotic translation …
- 0.923
- Complex
- CWC15
- CWC15 spliceosome assoc…
- 0.890
- PPI
- HNRNPH2
- heterogeneous nuclear r…
- 0.869
- PPI
- PRPF8
- pre-mRNA processing fac…
- 0.868
- PPI
- HNRNPH3
- heterogeneous nuclear r…
- 0.859
- PPI
- RBM17
- RNA binding motif prote…
- 0.843
- Metabolic
- SUPT16H
- SPT16 homolog, facilita…
- 0.841
- PPI
- SUPT6H
- SPT6 homolog, histone c…
- 0.831
- PPI
- PSMC4
- proteasome 26S subunit,…
- 0.824
- Complex
- RNPS1
- RNA binding protein wit…
- 0.811
- PPI
- HUWE1
- HECT, UBA and WWE domai…
- 0.779
- PPI
- DDX42
- DEAD-box helicase 42
- 0.766
- Metabolic
- BANF1
- BAF nuclear assembly fa…
- 0.750
- PPI
- XPO1
- exportin 1
- 0.741
- PPI
- HNRNPF
- heterogeneous nuclear r…
- 0.727
- PPI
- CWC22
- CWC22 spliceosome assoc…
- 0.723
- PPI
- TCEA1
- transcription elongatio…
- 0.721
- PPI
- ELAVL1
- ELAV like RNA binding p…
- 0.720
- Complex
- COPS6
- COP9 signalosome subuni…
- 0.709
- Complex
- IK
- IK cytokine
- 0.697
- PPI
- NUP85
- nucleoporin 85
- 0.693
- Metabolic
- PRPF19
- pre-mRNA processing fac…
- 0.688
- PPI
- SMC1A
- structural maintenance …
- 0.668
- PPI
- EED
- embryonic ectoderm deve…
- 0.668
- PPI
- PRPF40A
- pre-mRNA processing fac…
- 0.664
- PPI
- GRPEL1
- GrpE like 1, mitochondr…
- 0.661
- Complex
- POLR2B
- RNA polymerase II subun…
- 0.655
- Metabolic
ENSG00000234857
HNRNPUL2-BSCL2 readthrough (NMD candidate)
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HNRNPH1
heterogeneous nuclear ribonucleoprotein H1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- D6R9D3
- D6R9T0
- D6RAM1
- D6RBM0
- D6RDL0
- D6RDU3
- D6RF17
- D6RFM3
- D6RIH9
- D6RIT2
- D6RIU0
- D6RJ04
- E5RGH4
- E5RGV0
- E5RJ94
- E7EN40
- E7EQJ0
- E9PCY7
- G8JLB6
- H0YAQ2
- H0YB39
- H0YBD7
- H0YBG7
- H0YBK1
- H0YBW2
- P31943
- NCBI
CWC15
CWC15 spliceosome associated protein homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HUWE1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TOP1
DNA topoisomerase I
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EED
embryonic ectoderm development
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HNRNPH2
heterogeneous nuclear ribonucleoprotein H2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HNRNPF
heterogeneous nuclear ribonucleoprotein F
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SUPT6H
SPT6 homolog, histone chaperone and transcription elongation factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CWC22
CWC22 spliceosome associated protein homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SMC1A
structural maintenance of chromosomes 1A
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- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR2B
RNA polymerase II subunit B
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- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF19
pre-mRNA processing factor 19
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TCEA1
transcription elongation factor A1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BANF1
BAF nuclear assembly factor 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HNRNPH3
heterogeneous nuclear ribonucleoprotein H3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit
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- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PSMC4
proteasome 26S subunit, ATPase 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF40A
pre-mRNA processing factor 40 homolog A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM17
RNA binding motif protein 17
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EEF2
eukaryotic translation elongation factor 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NUP85
nucleoporin 85
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- F5H0W7
- J3KRC0
- J3KS87
- J3KSH3
- J3KT10
- J3KTC7
- J3QL49
- J3QL54
- J3QL91
- J3QLD4
- J3QLH0
- J3QLV0
- J3QRY3
- J3QS63
- Q9BW27
- NCBI
SF3B6
splicing factor 3b subunit 6
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
GRPEL1
GrpE like 1, mitochondrial
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDX42
DEAD-box helicase 42
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF8
pre-mRNA processing factor 8
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ELAVL1
ELAV like RNA binding protein 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
IK
IK cytokine
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
COPS6
COP9 signalosome subunit 6
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000234857 | ENSG00000234857 | HNRNPUL2-BSCL2 readthrough (NMD candidate) | ||
| H3BQZ7 |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
28
|
HNRNPH1 | ENSG00000169045 | heterogeneous nuclear ribonucleoprotein H1 | ||
| D6R9D3 D6R9T0 D6RAM1 D6RBM0 D6RDL0 D6RDU3 D6RF17 D6RFM3 D6RIH9 D6RIT2 D6RIU0 D6RJ04 E5RGH4 E5RGV0 E5RJ94 E7EN40 E7EQJ0 E9PCY7 G8JLB6 H0YAQ2 H0YB39 H0YBD7 H0YBG7 H0YBK1 H0YBW2 P31943 | ||||
| 3187 | ||||
26
|
CWC15 | ENSG00000150316 | CWC15 spliceosome associated protein homolog | ||
| Q9P013 | ||||
| 51503 | ||||
| Spliceosome | ||||
14
|
HUWE1 | ENSG00000086758 | HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 | ||
| A0A087X146 A0A087X1S3 A0A1B0GXC7 H0Y659 Q7Z6Z7 | ||||
| 10075 | ||||
| Ubiquitin mediated proteolysis | ||||
25
|
TOP1 | ENSG00000198900 | DNA topoisomerase I | ||
| P11387 | ||||
| 7150 | ||||
26
|
EED | ENSG00000074266 | embryonic ectoderm development | ||
| A0A5F9ZI63 E9PJK2 E9PMU3 H0YEL4 O75530 | ||||
| 8726 | ||||
25
|
HNRNPH2 | ENSG00000126945 | heterogeneous nuclear ribonucleoprotein H2 | ||
| P55795 | ||||
| 3188 | ||||
26
|
HNRNPF | ENSG00000169813 | heterogeneous nuclear ribonucleoprotein F | ||
| A0A1B0GW42 P52597 | ||||
| 3185 | ||||
26
|
SUPT6H | ENSG00000109111 | SPT6 homolog, histone chaperone and transcription elongation factor | ||
| J3QS64 K7EK85 Q7KZ85 | ||||
| 6830 | ||||
29
|
CWC22 | ENSG00000163510 | CWC22 spliceosome associated protein homolog | ||
| B7WP74 Q9HCG8 | ||||
| 57703 | ||||
25
|
SMC1A | ENSG00000072501 | structural maintenance of chromosomes 1A | ||
| G8JLG1 H0Y7K8 Q14683 V9GY57 V9GYN9 | ||||
| 8243 | ||||
| Oocyte meiosis Cell cycle | ||||
25
|
POLR2B | ENSG00000047315 | RNA polymerase II subunit B | ||
| A0A1W2PPT5 C9J2Y9 C9J4M6 C9JMN3 C9JZW8 P30876 | ||||
| 5431 | ||||
| RNA polymerase | ||||
30
|
PRPF19 | ENSG00000110107 | pre-mRNA processing factor 19 | ||
| F5GY56 F5H2I0 H0YGF3 H0YGZ5 Q9UMS4 | ||||
| 27339 | ||||
| Spliceosome Ubiquitin mediated proteolysis | ||||
28
|
TCEA1 | ENSG00000187735 | transcription elongation factor A1 | ||
| A0A1W2PPV7 A0A1W2PPZ5 A0A1W2PRL9 A0A1W2PS15 B7Z4S1 E5RFI1 E5RIS7 E5RJ93 E5RK46 P23193 | ||||
| 6917 | ||||
25
|
BANF1 | ENSG00000175334 | BAF nuclear assembly factor 1 | ||
| E9PJJ8 O75531 | ||||
| 8815 | ||||
22
|
HNRNPH3 | ENSG00000096746 | heterogeneous nuclear ribonucleoprotein H3 | ||
| P31942 | ||||
| 3189 | ||||
29
|
SUPT16H | ENSG00000092201 | SPT16 homolog, facilitates chromatin remodeling subunit | ||
| G3V2X0 G3V401 G3V5A4 Q9Y5B9 | ||||
| 11198 | ||||
23
|
PSMC4 | ENSG00000013275 | proteasome 26S subunit, ATPase 4 | ||
| P43686 | ||||
| 5704 | ||||
| Proteasome | ||||
29
|
PRPF40A | ENSG00000196504 | pre-mRNA processing factor 40 homolog A | ||
| A0A3F2YNY6 F5H578 H0YG38 H7BXZ7 H7C2N3 O75400 | ||||
| 55660 | ||||
| Spliceosome | ||||
21
|
RBM17 | ENSG00000134453 | RNA binding motif protein 17 | ||
| H0Y6J6 Q5W010 Q5W011 Q5W012 Q96I25 | ||||
| 84991 | ||||
| Spliceosome | ||||
27
|
EEF2 | ENSG00000167658 | eukaryotic translation elongation factor 2 | ||
| M0R0I6 P13639 | ||||
| 1938 | ||||
| AMPK signaling pathway Oxytocin signaling pathway | ||||
26
|
NUP85 | ENSG00000125450 | nucleoporin 85 | ||
| F5H0W7 J3KRC0 J3KS87 J3KSH3 J3KT10 J3KTC7 J3QL49 J3QL54 J3QL91 J3QLD4 J3QLH0 J3QLV0 J3QRY3 J3QS63 Q9BW27 | ||||
| 79902 | ||||
| RNA transport | ||||
27
|
SF3B6 | ENSG00000115128 | splicing factor 3b subunit 6 | ||
| Q9Y3B4 | ||||
| 51639 | ||||
| Spliceosome | ||||
22
|
GRPEL1 | ENSG00000109519 | GrpE like 1, mitochondrial | ||
| Q9HAV7 | ||||
| 80273 | ||||
23
|
DDX42 | ENSG00000198231 | DEAD-box helicase 42 | ||
| A0A0A0MSJ0 J3KRE3 J3KRV0 J3KTK9 J3QRI2 Q86XP3 | ||||
| 11325 | ||||
| Spliceosome | ||||
30
|
PRPF8 | ENSG00000174231 | pre-mRNA processing factor 8 | ||
| I3L0J9 I3L1T8 I3L3Z8 Q6P2Q9 | ||||
| 10594 | ||||
| Spliceosome | ||||
15
|
ELAVL1 | ENSG00000066044 | ELAV like RNA binding protein 1 | ||
| M0QZR9 M0R055 Q15717 | ||||
| 1994 | ||||
| AMPK signaling pathway IL-17 signaling pathway | ||||
26
|
IK | ENSG00000113141 | IK cytokine | ||
| A0A0C4DGW5 D6RAH1 D6RAY9 D6RCQ4 D6REL4 E7EQZ7 Q13123 | ||||
| 3550 | ||||
25
|
COPS6 | ENSG00000168090 | COP9 signalosome subunit 6 | ||
| C9JQK5 E7EM64 H7C3T0 Q7L5N1 | ||||
| 10980 | ||||
21
|
RNPS1 | ENSG00000205937 | RNA binding protein with serine rich domain 1 | ||
| H3BMM9 H3BMS0 H3BNI3 H3BNU7 H3BP82 H3BPG5 H3BRK4 H3BTC0 H3BTR6 H3BTV0 H3BTY0 H3BUG0 H3BUL0 H3BV80 Q15287 | ||||
| 10921 | ||||
| RNA transport mRNA surveillance pathway | ||||
30
|
XPO1 | ENSG00000082898 | exportin 1 | ||
| C9IYM2 C9IZS4 C9J673 C9JF49 C9JKM9 C9JQ02 C9JV99 F8WF71 H7BZC5 O14980 | ||||
| 7514 | ||||
| Ribosome biogenesis in eukaryotes RNA transport |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
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jSquid_subnetworks.xml | 309.05 KB | |
H.sapiens_subnetwork.tsv | 72.26 KB |