Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000225663
- MAPK regulated corepres…
- CORO1C
- coronin 1C
- 0.949
- Complex
- ILKAP
- ILK associated serine/t…
- 0.859
- Complex
- LIG3
- DNA ligase 3
- 0.823
- Complex
- LANCL1
- LanC like 1
- 0.792
- Complex
- LSM4
- LSM4 homolog, U6 small …
- 0.777
- Metabolic
- TRDMT1
- tRNA aspartic acid meth…
- 0.723
- Complex
- SUDS3
- SDS3 homolog, SIN3A cor…
- 0.680
- Complex
- RPL19
- ribosomal protein L19
- 0.652
- Metabolic
- POLR2D
- RNA polymerase II subun…
- 0.631
- Metabolic
- VCP
- valosin containing prot…
- 0.559
- Metabolic
- GET3
- guided entry of tail-an…
- 0.544
- Metabolic
- TUBB
- tubulin beta class I
- 0.535
- Metabolic
- DDX6
- DEAD-box helicase 6
- 0.520
- Complex
- CFL1
- cofilin 1
- 0.502
- Metabolic
- PPP5C
- protein phosphatase 5 c…
- 0.465
- Metabolic
- ATP6V1F
- ATPase H+ transporting …
- 0.454
- Metabolic
- TXN2
- thioredoxin 2
- 0.444
- Metabolic
- DDX1
- DEAD-box helicase 1
- 0.440
- Metabolic
Subnetwork gene interactions
ENSG00000225663
MAPK regulated corepressor interacting protein 1
FunCoup
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- Ensembl
- UniProt
- NCBI
ATP6V1F
ATPase H+ transporting V1 subunit F
FunCoup
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- Ensembl
- UniProt
- NCBI
CORO1C
coronin 1C
FunCoup
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- Ensembl
- UniProt
- NCBI
RPL19
ribosomal protein L19
FunCoup
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- Ensembl
- UniProt
- NCBI
DDX1
DEAD-box helicase 1
FunCoup
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- Ensembl
- UniProt
- NCBI
DDX6
DEAD-box helicase 6
FunCoup
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- Ensembl
- UniProt
- NCBI
PPP5C
protein phosphatase 5 catalytic subunit
FunCoup
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- Ensembl
- UniProt
- NCBI
LSM4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
FunCoup
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- Ensembl
- UniProt
- NCBI
POLR2D
RNA polymerase II subunit D
FunCoup
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- Ensembl
- UniProt
- NCBI
TUBB
tubulin beta class I
FunCoup
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- Ensembl
- UniProt
- NCBI
ILKAP
ILK associated serine/threonine phosphatase
FunCoup
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- Ensembl
- UniProt
- NCBI
GET3
guided entry of tail-anchored proteins factor 3, ATPase
FunCoup
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- Ensembl
- UniProt
- NCBI
VCP
valosin containing protein
FunCoup
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- Ensembl
- UniProt
- NCBI
TXN2
thioredoxin 2
FunCoup
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- Ensembl
- UniProt
- NCBI
TRDMT1
tRNA aspartic acid methyltransferase 1
FunCoup
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- Ensembl
- UniProt
- NCBI
SUDS3
SDS3 homolog, SIN3A corepressor complex component
FunCoup
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- Ensembl
- UniProt
- NCBI
LIG3
DNA ligase 3
FunCoup
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- Ensembl
- UniProt
- NCBI
CFL1
cofilin 1
FunCoup
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- Ensembl
- UniProt
- NCBI
Query genes
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
9
|
ATP6V1F | ENSG00000128524 | ATPase H+ transporting V1 subunit F | ||
| Q16864 | ||||
| 9296 | ||||
| Synaptic vesicle cycle mTOR signaling pathway | ||||
| Phagosome Oxidative phosphorylation | ||||
12
|
CORO1C | ENSG00000110880 | coronin 1C | ||
| B4E3S0 F8VRE9 F8VSA4 F8VTT6 F8VUX3 F8VV53 F8VVB7 F8W1H8 H0YHL7 Q9ULV4 | ||||
| 23603 | ||||
12
|
RPL19 | ENSG00000108298 | ribosomal protein L19 | ||
| J3KTE4 J3QR09 P84098 | ||||
| 6143 | ||||
| Ribosome | ||||
10
|
DDX1 | ENSG00000079785 | DEAD-box helicase 1 | ||
| A0A087X2G1 C9JLP0 F1T0B3 Q92499 | ||||
| 1653 | ||||
9
|
DDX6 | ENSG00000110367 | DEAD-box helicase 6 | ||
| P26196 Q8IV96 | ||||
| 1656 | ||||
| RNA degradation | ||||
11
|
PPP5C | ENSG00000011485 | protein phosphatase 5 catalytic subunit | ||
| A8MU39 H0YDU8 P53041 | ||||
| 5536 | ||||
| MAPK signaling pathway | ||||
12
|
LSM4 | ENSG00000130520 | LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| M0QXB0 Q9Y4Z0 U3KQK1 V9GZ56 | ||||
| 25804 | ||||
| RNA degradation Spliceosome | ||||
10
|
POLR2D | ENSG00000144231 | RNA polymerase II subunit D | ||
| E9PB93 E9PHV4 O15514 | ||||
| 5433 | ||||
| RNA polymerase | ||||
13
|
TUBB | ENSG00000196230 | tubulin beta class I | ||
| P07437 Q5JP53 Q5ST81 | ||||
| 203068 | ||||
| Gap junction | ||||
| Phagosome | ||||
4
|
ILKAP | ENSG00000132323 | ILK associated serine/threonine phosphatase | ||
| E9PC05 F8SNU6 F8SNU7 H7C2I8 Q9H0C8 | ||||
| 80895 | ||||
13
|
GET3 | ENSG00000198356 | guided entry of tail-anchored proteins factor 3, ATPase | ||
| A0A087WXS7 K7ERW9 O43681 | ||||
| 439 | ||||
13
|
VCP | ENSG00000165280 | valosin containing protein | ||
| C9IZA5 C9JUP7 P55072 | ||||
| 7415 | ||||
| Protein processing in endoplasmic reticulum | ||||
7
|
TXN2 | ENSG00000100348 | thioredoxin 2 | ||
| F8WDN2 M0QXH0 Q99757 | ||||
| 25828 | ||||
| NOD-like receptor signaling pathway | ||||
2
|
TRDMT1 | ENSG00000107614 | tRNA aspartic acid methyltransferase 1 | ||
| A0A0B4J214 A0A0C4DG18 B7Z8H2 H0Y2T8 H0Y4A2 O14717 Q7Z3E4 | ||||
| 1787 | ||||
2
|
SUDS3 | ENSG00000111707 | SDS3 homolog, SIN3A corepressor complex component | ||
| Q9H7L9 | ||||
| 64426 | ||||
4
|
LIG3 | ENSG00000005156 | DNA ligase 3 | ||
| K7EJR4 K7ELY6 K7ENR9 K7EQB6 K7ERZ5 P49916 | ||||
| 3980 | ||||
| Base excision repair | ||||
12
|
CFL1 | ENSG00000172757 | cofilin 1 | ||
| E9PK25 E9PLJ3 E9PP50 E9PQB7 E9PS23 G3V1A4 P23528 | ||||
| 1072 | ||||
| Fc gamma R-mediated phagocytosis | ||||
5
|
LANCL1 | ENSG00000115365 | LanC like 1 | ||
| E9PHS0 F8WDS9 H7C2E3 O43813 | ||||
| 10314 |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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jSquid_subnetworks.xml | 173.04 KB | |
H.sapiens_subnetwork.tsv | 17.07 KB |