Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000221926
- tripartite motif contai…
- VIM
- vimentin
- 0.940
- PPI
- PRPF40A
- pre-mRNA processing fac…
- 0.918
- Complex
- OPTN
- optineurin
- 0.888
- PPI
- PSMC6
- proteasome 26S subunit,…
- 0.798
- Complex
- TNRC18
- trinucleotide repeat co…
- 0.766
- Complex
- ACD
- ACD shelterin complex s…
- 0.724
- PPI
- BRPF1
- bromodomain and PHD fin…
- 0.701
- Complex
- CUL4A
- cullin 4A
- 0.700
- PPI
- TINF2
- TERF1 interacting nucle…
- 0.596
- PPI
- E2F1
- E2F transcription facto…
- 0.506
- PPI
- RGCC
- regulator of cell cycle
- 0.466
- PPI
- TERF1
- telomeric repeat bindin…
- 0.447
- PPI
- TRIM16L
- tripartite motif contai…
- 0.417
- PPI
Subnetwork gene interactions
ENSG00000221926
tripartite motif containing 16
FunCoup
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- Ensembl
- UniProt
- NCBI
TRIM16L
tripartite motif containing 16 like
FunCoup
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- Ensembl
- UniProt
- NCBI
TNRC18
trinucleotide repeat containing 18
FunCoup
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- Ensembl
- UniProt
- NCBI
BRPF1
bromodomain and PHD finger containing 1
FunCoup
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- Ensembl
- UniProt
- NCBI
CUL4A
cullin 4A
FunCoup
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- Ensembl
- UniProt
- NCBI
PSMC6
proteasome 26S subunit, ATPase 6
FunCoup
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- Ensembl
- UniProt
- NCBI
E2F1
E2F transcription factor 1
FunCoup
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- Ensembl
- UniProt
- NCBI
TINF2
TERF1 interacting nuclear factor 2
FunCoup
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- Ensembl
- UniProt
- NCBI
VIM
vimentin
FunCoup
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- Ensembl
- UniProt
- NCBI
ACD
ACD shelterin complex subunit and telomerase recruitment factor
FunCoup
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- Ensembl
- UniProt
- NCBI
TERF1
telomeric repeat binding factor 1
FunCoup
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- Ensembl
- UniProt
- NCBI
PRPF40A
pre-mRNA processing factor 40 homolog A
FunCoup
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- Ensembl
- UniProt
- NCBI
RGCC
regulator of cell cycle
FunCoup
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- Ensembl
- UniProt
- NCBI
OPTN
optineurin
FunCoup
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- Ensembl
- UniProt
- NCBI
Query genes
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
1
|
TRIM16L | ENSG00000108448 | tripartite motif containing 16 like | ||
| Q309B1 | ||||
| 147166 | ||||
5
|
TNRC18 | ENSG00000182095 | trinucleotide repeat containing 18 | ||
| A8MTZ4 C9J9K1 H7BXS9 H7C0N9 H7C177 H7C3U5 H9KVB4 O15417 | ||||
| 84629 | ||||
4
|
BRPF1 | ENSG00000156983 | bromodomain and PHD finger containing 1 | ||
| A0A5F9ZH11 A0A5F9ZHW9 A0A5F9ZHX4 C9JDK5 C9JHC0 P55201 | ||||
| 7862 | ||||
4
|
CUL4A | ENSG00000139842 | cullin 4A | ||
| A0A087WWN2 A0A0A0MR50 Q13619 | ||||
| 8451 | ||||
| Ubiquitin mediated proteolysis Nucleotide excision repair | ||||
7
|
PSMC6 | ENSG00000100519 | proteasome 26S subunit, ATPase 6 | ||
| A0A087X2I1 H0YJC0 H0YJD2 H0YJE9 H0YJS8 H0YJT1 H0YJW2 H0YJX2 H0YJY8 P62333 | ||||
| 5706 | ||||
| Proteasome | ||||
2
|
E2F1 | ENSG00000101412 | E2F transcription factor 1 | ||
| Q01094 | ||||
| 1869 | ||||
| Cell cycle | ||||
4
|
TINF2 | ENSG00000092330 | TERF1 interacting nuclear factor 2 | ||
| B4DFJ1 H0YKA6 H0YL20 H0YL96 H0YLC9 H0YMN3 Q9BSI4 | ||||
| 26277 | ||||
2
|
VIM | ENSG00000026025 | vimentin | ||
| A0A1B0GTT5 A0A1B0GVG8 B0YJC4 B0YJC5 P08670 | ||||
| 7431 | ||||
3
|
ACD | ENSG00000102977 | ACD shelterin complex subunit and telomerase recruitment factor | ||
| A0A590TQL1 A0A5F9ZCY9 Q96AP0 R4GMR6 R4GND4 R4GNJ5 | ||||
| 65057 | ||||
3
|
TERF1 | ENSG00000147601 | telomeric repeat binding factor 1 | ||
| E5RFJ5 E7EWM7 P54274 | ||||
| 7013 | ||||
5
|
PRPF40A | ENSG00000196504 | pre-mRNA processing factor 40 homolog A | ||
| A0A3F2YNY6 F5H578 H0YG38 H7BXZ7 H7C2N3 O75400 | ||||
| 55660 | ||||
| Spliceosome | ||||
2
|
RGCC | ENSG00000102760 | regulator of cell cycle | ||
| Q9H4X1 | ||||
| 28984 | ||||
1
|
OPTN | ENSG00000123240 | optineurin | ||
| A0A087WY28 A0A087X2G2 H7C1H4 Q96CV9 X6RKL2 | ||||
| 10133 |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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Copied subnetwork genes to clipboard
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jSquid_subnetworks.xml | 120.01 KB | |
H.sapiens_subnetwork.tsv | 4.59 KB |