Found 1 of 1 query genes

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Query interactions

Interaction partners
Confidence
Network
MEX
PIN
SCL
PHP
MIR
TFB
PEX
GIN
DOM
QMS
GRG
Evidence types
HSA
MMU
RNO
CFA
GGA
DRE
CIN
DME
CEL
BTA
SCE
ATH
SPO
BSU
ECO
PFA
DDI
SSO
SSC
MJA
OSA
Species
In Gold st.

ID Query gene
ID Query ortholog

Log-likelihood ratio (LLR)
	Highly positive
	Positive
	Zero
	Negative
	Highly negative
Known coupling
	This network
	Other network

2. ENSG00000213638
3. adenosine deaminase tRN…
- 2. ADAT2
  3. adenosine deaminase tRN…
  4. 1.000
  5. PPI
- 2. KAT2A
  3. lysine acetyltransferas…
  4. 0.995
  5. PPI
- 2. PSMD3
  3. proteasome 26S subunit,…
  4. 0.967
  5. Complex
- 2. KLHDC10
  3. kelch domain containing…
  4. 0.965
  5. PPI
- 2. RBM39
  3. RNA binding motif prote…
  4. 0.960
  5. Metabolic
- 2. SMNDC1
  3. survival motor neuron d…
  4. 0.954
  5. Metabolic
- 2. TCEA1
  3. transcription elongatio…
  4. 0.947
  5. Metabolic
- 2. NMD3
  3. NMD3 ribosome export ad…
  4. 0.944
  5. Metabolic
- 2. RNASEH2A
  3. ribonuclease H2 subunit…
  4. 0.919
  5. Metabolic
- 2. NIPBL
  3. NIPBL cohesin loading f…
  4. 0.918
  5. Metabolic
- 2. NAA25
  3. N-alpha-acetyltransfera…
  4. 0.916
  5. Metabolic
- 2. ZNF593
  3. zinc finger protein 593
  4. 0.901
  5. Metabolic
- 2. TCEA2
  3. transcription elongatio…
  4. 0.900
  5. Metabolic
- 2. TRMT1
  3. tRNA methyltransferase 1
  4. 0.899
  5. Metabolic
- 2. PRMT5
  3. protein arginine methyl…
  4. 0.891
  5. Complex
- 2. POLR3H
  3. RNA polymerase III subu…
  4. 0.874
  5. Metabolic
- 2. RBM28
  3. RNA binding motif prote…
  4. 0.873
  5. Metabolic
- 2. RUVBL1
  3. RuvB like AAA ATPase 1
  4. 0.869
  5. Metabolic
- 2. TBL3
  3. transducin beta like 3
  4. 0.866
  5. Metabolic
- 2. PRMT1
  3. protein arginine methyl…
  4. 0.851
  5. Metabolic
- 2. DHX38
  3. DEAH-box helicase 38
  4. 0.849
  5. Metabolic
- 2. SMC5
  3. structural maintenance …
  4. 0.848
  5. Metabolic
- 2. RRP36
  3. ribosomal RNA processin…
  4. 0.845
  5. Metabolic
- 2. PIGA
  3. phosphatidylinositol gl…
  4. 0.842
  5. Metabolic
- 2. EXOSC2
  3. exosome component 2
  4. 0.841
  5. Metabolic
- 2. U2AF1
  3. U2 small nuclear RNA au…
  4. 0.839
  5. Metabolic
- 2. CLASRP
  3. CLK4 associating serine…
  4. 0.832
  5. Metabolic
- 2. PNN
  3. pinin, desmosome associ…
  4. 0.831
  5. Metabolic
- 2. NSA2
  3. NSA2 ribosome biogenesi…
  4. 0.827
  5. Metabolic
- 2. DHX8
  3. DEAH-box helicase 8
  4. 0.809
  5. Metabolic

Subnetwork gene interactions

ENSG00000213638

adenosine deaminase tRNA specific 3

FunCoup

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Ensembl

ENSG00000213638

UniProt

NCBI

113179

TBL3

transducin beta like 3

FunCoup

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Ensembl

ENSG00000183751

UniProt

NCBI

10607

KAT2A

lysine acetyltransferase 2A

FunCoup

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Ensembl

ENSG00000108773

UniProt

NCBI

2648

PIGA

phosphatidylinositol glycan anchor biosynthesis class A

FunCoup

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Ensembl

ENSG00000165195

UniProt

NCBI

5277

RNASEH2A

ribonuclease H2 subunit A

FunCoup

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Ensembl

ENSG00000104889

UniProt

NCBI

10535

CLASRP

CLK4 associating serine/arginine rich protein

FunCoup

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Ensembl

ENSG00000104859

UniProt

NCBI

11129

PNN

pinin, desmosome associated protein

FunCoup

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Ensembl

ENSG00000100941

UniProt

NCBI

5411

NAA25

N-alpha-acetyltransferase 25, NatB auxiliary subunit

FunCoup

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Ensembl

ENSG00000111300

UniProt

NCBI

80018

DHX8

DEAH-box helicase 8

FunCoup

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Ensembl

ENSG00000067596

UniProt

NCBI

1659

RBM28

RNA binding motif protein 28

FunCoup

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Ensembl

ENSG00000106344

UniProt

NCBI

55131

PRMT1

protein arginine methyltransferase 1

FunCoup

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Ensembl

ENSG00000126457

UniProt

NCBI

3276

NSA2

NSA2 ribosome biogenesis factor

FunCoup

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Ensembl

ENSG00000164346

UniProt

NCBI

10412

SMC5

structural maintenance of chromosomes 5

FunCoup

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Ensembl

ENSG00000198887

UniProt

Q8IY18

NCBI

23137

PSMD3

proteasome 26S subunit, non-ATPase 3

FunCoup

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Ensembl

ENSG00000108344

UniProt

NCBI

5709

ZNF593

zinc finger protein 593

FunCoup

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Ensembl

ENSG00000142684

UniProt

NCBI

51042

PRMT5

protein arginine methyltransferase 5

FunCoup

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Ensembl

ENSG00000100462

UniProt

NCBI

10419

NMD3

NMD3 ribosome export adaptor

FunCoup

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Ensembl

ENSG00000169251

UniProt

NCBI

51068

POLR3H

RNA polymerase III subunit H

FunCoup

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Ensembl

ENSG00000100413

UniProt

NCBI

171568

TRMT1

tRNA methyltransferase 1

FunCoup

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Ensembl

ENSG00000104907

UniProt

NCBI

55621

SMNDC1

survival motor neuron domain containing 1

FunCoup

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Ensembl

ENSG00000119953

UniProt

O75940

NCBI

10285

DHX38

DEAH-box helicase 38

FunCoup

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Ensembl

ENSG00000140829

UniProt

NCBI

9785

EXOSC2

exosome component 2

FunCoup

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Ensembl

ENSG00000130713

UniProt

NCBI

23404

RBM39

RNA binding motif protein 39

FunCoup

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Ensembl

ENSG00000131051

UniProt

NCBI

9584

TCEA1

transcription elongation factor A1

FunCoup

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Ensembl

ENSG00000187735

UniProt

NCBI

6917

U2AF1

U2 small nuclear RNA auxiliary factor 1

FunCoup

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Ensembl

ENSG00000160201

UniProt

NCBI

ADAT2

adenosine deaminase tRNA specific 2

FunCoup

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Ensembl

ENSG00000189007

UniProt

Q7Z6V5

NCBI

134637

NIPBL

NIPBL cohesin loading factor

FunCoup

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Ensembl

ENSG00000164190

UniProt

NCBI

25836

RUVBL1

RuvB like AAA ATPase 1

FunCoup

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Ensembl

ENSG00000175792

UniProt

NCBI

8607

TCEA2

transcription elongation factor A2

FunCoup

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Ensembl

ENSG00000171703

UniProt

NCBI

6919

RRP36

ribosomal RNA processing 36

FunCoup

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Ensembl

ENSG00000124541

UniProt

NCBI

88745

KLHDC10

kelch domain containing 10

FunCoup

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Ensembl

ENSG00000128607

UniProt

NCBI

23008

Query genes

		Identifier	Description
30	ENSG00000213638	ENSG00000213638	adenosine deaminase tRNA specific 3
		UniProt	C9JFC1 D6W601 Q96EY9
		NCBI	113179

Subnetwork genes

		Identifier	Description
26	TBL3	ENSG00000183751	transducin beta like 3
		UniProt	A0A087WYP7 H3BN88 J3KNP2 Q12788
		NCBI	10607
		KEGG metabolic	Ribosome biogenesis in eukaryotes
14	KAT2A	ENSG00000108773	lysine acetyltransferase 2A
		UniProt	K7EPC4 K7ERS6 Q92830
		NCBI	2648
		KEGG signaling	Thyroid hormone signaling pathway Notch signaling pathway
16	PIGA	ENSG00000165195	phosphatidylinositol glycan anchor biosynthesis class A
		UniProt	A0A0U1RQF5 A0A0U1RQM9 A0A0U1RQW8 A0A0U1RRE8 A0A1B0GU19 A0A1B0GVE5 A8K382 B3KUV7 P37287
		NCBI	5277
		KEGG metabolic	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
24	RNASEH2A	ENSG00000104889	ribonuclease H2 subunit A
		UniProt	A0A2R8Y606 A0A2R8Y658 O75792
		NCBI	10535
		KEGG metabolic	DNA replication
11	CLASRP	ENSG00000104859	CLK4 associating serine/arginine rich protein
		UniProt	A0A0A0MQS2 F5H0Q6 K7EKC9 K7EKR8 K7EM61 K7EP11 Q8N2M8
		NCBI	11129
23	PNN	ENSG00000100941	pinin, desmosome associated protein
		UniProt	G3V579 G3V5F0 Q9H307
		NCBI	5411
		KEGG metabolic	RNA transport mRNA surveillance pathway
23	NAA25	ENSG00000111300	N-alpha-acetyltransferase 25, NatB auxiliary subunit
		UniProt	F8VSB9 F8W0N5 H0YHR9 Q14CX7
		NCBI	80018
26	DHX8	ENSG00000067596	DEAH-box helicase 8
		UniProt	F5H658 K7EJH9 K7END7 K7EQH7 Q14562
		NCBI	1659
		KEGG metabolic	Spliceosome
24	RBM28	ENSG00000106344	RNA binding motif protein 28
		UniProt	C9JAA9 C9JE21 H7C5G8 Q9NW13
		NCBI	55131
		KEGG metabolic	Ribosome biogenesis in eukaryotes
21	PRMT1	ENSG00000126457	protein arginine methyltransferase 1
		UniProt	E9PIE2 E9PIX6 E9PKG1 E9PMW9 E9PMZ2 E9PNR9 E9PQ98 H0YDE4 Q99873
		NCBI	3276
		KEGG signaling	FoxO signaling pathway Glucagon signaling pathway
28	NSA2	ENSG00000164346	NSA2 ribosome biogenesis factor
		UniProt	A0A0A0MQZ6 H0YAI9 O95478
		NCBI	10412
26	SMC5	ENSG00000198887	structural maintenance of chromosomes 5
		UniProt	Q8IY18
		NCBI	23137
21	PSMD3	ENSG00000108344	proteasome 26S subunit, non-ATPase 3
		UniProt	F5H8K4 H0YGV8 O43242
		NCBI	5709
		KEGG metabolic	Proteasome
23	ZNF593	ENSG00000142684	zinc finger protein 593
		UniProt	A9J4F5 O00488
		NCBI	51042
25	PRMT5	ENSG00000100462	protein arginine methyltransferase 5
		UniProt	C9JSX3 G3V2F5 G3V2L6 G3V2X6 G3V3A3 G3V507 G3V580 G3V5L5 G3V5T6 H0YJ77 H0YJD3 H0YJX6 H0YJY6 H7BZ44 O14744
		NCBI	10419
		KEGG metabolic	RNA transport
27	NMD3	ENSG00000169251	NMD3 ribosome export adaptor
		UniProt	C9IY70 C9IZW9 C9J0B9 C9JA08 C9K0C2 Q96D46
		NCBI	51068
		KEGG metabolic	Ribosome biogenesis in eukaryotes RNA transport
23	POLR3H	ENSG00000100413	RNA polymerase III subunit H
		UniProt	E7ERZ2 F8WDS5 F8WDV1 Q9Y535
		NCBI	171568
		KEGG signaling	Cytosolic DNA-sensing pathway
		KEGG metabolic	RNA polymerase
27	TRMT1	ENSG00000104907	tRNA methyltransferase 1
		UniProt	K7EJX9 K7EMZ2 K7ENI9 K7EQQ8 K7EQU7 K7EQY6 K7ERR5 Q9NXH9
		NCBI	55621
23	SMNDC1	ENSG00000119953	survival motor neuron domain containing 1
		UniProt	O75940
		NCBI	10285
		KEGG metabolic	Spliceosome
29	DHX38	ENSG00000140829	DEAH-box helicase 38
		UniProt	H3BMS7 H3BQT9 H3BV01 J3KRT1 J3KSA8 J3KTG2 Q92620
		NCBI	9785
		KEGG metabolic	Spliceosome
28	EXOSC2	ENSG00000130713	exosome component 2
		UniProt	A3KFL1 A3KFL2 A3KFL5 Q13868
		NCBI	23404
		KEGG metabolic	RNA degradation
22	RBM39	ENSG00000131051	RNA binding motif protein 39
		UniProt	A0A087X122 A0A0U1RQH7 A0A0U1RQW2 A8MYG5 F2Z2Z5 F2Z3E6 F8WF24 F8WF73 G3XAC6 H0Y4X3 H0Y6I9 H7BZG3 Q14498 Q5QP22 Q5QP23
		NCBI	9584
28	TCEA1	ENSG00000187735	transcription elongation factor A1
		UniProt	A0A1W2PPV7 A0A1W2PPZ5 A0A1W2PRL9 A0A1W2PS15 B7Z4S1 E5RFI1 E5RIS7 E5RJ93 E5RK46 P23193
		NCBI	6917
27	U2AF1	ENSG00000160201	U2 small nuclear RNA auxiliary factor 1
		UniProt	A0A1B0GW87 Q01081
		NCBI	102724594 7307
		KEGG metabolic	Spliceosome
12	ADAT2	ENSG00000189007	adenosine deaminase tRNA specific 2
		UniProt	Q7Z6V5
		NCBI	134637
20	NIPBL	ENSG00000164190	NIPBL cohesin loading factor
		UniProt	A0A590UJS4 H0Y8M3 Q6KC79
		NCBI	25836
28	RUVBL1	ENSG00000175792	RuvB like AAA ATPase 1
		UniProt	E7ETR0 H7C4G5 H7C4I3 J3QLR1 Q9Y265
		NCBI	8607
		KEGG signaling	Wnt signaling pathway
27	TCEA2	ENSG00000171703	transcription elongation factor A2
		UniProt	A0A0A0MT58 Q15560 Q5JRI7 Q5JRI8 Q86VL0
		NCBI	6919
21	RRP36	ENSG00000124541	ribosomal RNA processing 36
		UniProt	Q96EU6 U3KPZ9
		NCBI	88745
5	KLHDC10	ENSG00000128607	kelch domain containing 10
		UniProt	C9JRT7 C9JRX2 Q6PID8
		NCBI	23008

Enrichment analysis

Search for enrichment of pathways or functional gene sets for your subnetwork genes

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	jSquid_subnetworks.xml	300.96 KB
	H.sapiens_subnetwork.tsv	66.92 KB

Species:

Network information:

Filter Results:

Network appearance:

ENSG00000213638

TBL3

KAT2A

PIGA

RNASEH2A

CLASRP

PNN

NAA25

DHX8

RBM28

PRMT1

NSA2

SMC5

PSMD3

ZNF593

PRMT5

NMD3

POLR3H

TRMT1

SMNDC1

DHX38

EXOSC2

RBM39

TCEA1

U2AF1

ADAT2

NIPBL

RUVBL1

TCEA2

RRP36

KLHDC10

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