- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000213516
- RBMX like 1
- ILF2
- interleukin enhancer bi…
- 0.993
- PPI
- RBMX
- RNA binding motif prote…
- 0.960
- PPI
- MCM5
- minichromosome maintena…
- 0.953
- PPI
- LARP7
- La ribonucleoprotein 7,…
- 0.948
- PPI
- MATR3 (1 of 2)
- matrin 3
- 0.943
- PPI
- SNRNP70
- small nuclear ribonucle…
- 0.940
- PPI
- CDC40
- cell division cycle 40
- 0.931
- Metabolic
- CLK2
- CDC like kinase 2
- 0.926
- PPI
- SRSF1
- serine and arginine ric…
- 0.915
- PPI
- PPP1CB
- protein phosphatase 1 c…
- 0.902
- PPI
- MCM2
- minichromosome maintena…
- 0.896
- PPI
- ALYREF
- Aly/REF export factor
- 0.890
- Metabolic
- SFPQ
- splicing factor proline…
- 0.862
- PPI
- MATR3 (2 of 2)
- matrin 3
- 0.815
- PPI
- HNRNPK
- heterogeneous nuclear r…
- 0.790
- PPI
- BCLAF1
- BCL2 associated transcr…
- 0.783
- PPI
- SRSF9
- serine and arginine ric…
- 0.747
- Metabolic
- PRPF19
- pre-mRNA processing fac…
- 0.739
- Metabolic
- C1orf146
- chromosome 1 open readi…
- 0.725
- PPI
- U2AF1
- U2 small nuclear RNA au…
- 0.682
- Metabolic
- LSM7
- LSM7 homolog, U6 small …
- 0.676
- Complex
- LSM4
- LSM4 homolog, U6 small …
- 0.666
- Metabolic
- CUL4B
- cullin 4B
- 0.649
- PPI
- PCBP1
- poly(rC) binding protei…
- 0.626
- Complex
- RACK1
- receptor for activated …
- 0.621
- Complex
- PPIL3
- peptidylprolyl isomeras…
- 0.577
- Metabolic
- SF3B4
- splicing factor 3b subu…
- 0.570
- Metabolic
- LSM6
- LSM6 homolog, U6 small …
- 0.569
- Complex
- PLAA
- phospholipase A2 activa…
- 0.560
- Complex
- WDR3
- WD repeat domain 3
- 0.552
- Complex
ENSG00000213516
RBMX like 1
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- Ensembl
- UniProt
- NCBI
ILF2
interleukin enhancer binding factor 2
- Use as query
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- Ensembl
- UniProt
- NCBI
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
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- Ensembl
- UniProt
- NCBI
HNRNPK
heterogeneous nuclear ribonucleoprotein K
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- Ensembl
- UniProt
- NCBI
WDR3
WD repeat domain 3
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- Ensembl
- UniProt
- NCBI
CDC40
cell division cycle 40
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- Add to current query
- Ensembl
- UniProt
- NCBI
SF3B4
splicing factor 3b subunit 4
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- Ensembl
- UniProt
- NCBI
MCM2
minichromosome maintenance complex component 2
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- Ensembl
- UniProt
- NCBI
LARP7
La ribonucleoprotein 7, transcriptional regulator
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- Ensembl
- UniProt
- NCBI
SFPQ
splicing factor proline and glutamine rich
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- Ensembl
- UniProt
- NCBI
CLK2
CDC like kinase 2
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- Ensembl
- UniProt
- NCBI
MATR3 (1 of 2)
matrin 3
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
ALYREF
Aly/REF export factor
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- Ensembl
- UniProt
- NCBI
PPP1CB
protein phosphatase 1 catalytic subunit beta
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- Ensembl
- UniProt
- NCBI
PLAA
phospholipase A2 activating protein
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- Ensembl
- UniProt
- NCBI
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
SNRNP70
small nuclear ribonucleoprotein U1 subunit 70
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
SRSF9
serine and arginine rich splicing factor 9
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- Add to current query
- Ensembl
- UniProt
- NCBI
MCM5
minichromosome maintenance complex component 5
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- Add to current query
- Ensembl
- UniProt
- NCBI
PCBP1
poly(rC) binding protein 1
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- Ensembl
- UniProt
- NCBI
PPIL3
peptidylprolyl isomerase like 3
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- Ensembl
- UniProt
- NCBI
SRSF1
serine and arginine rich splicing factor 1
- Use as query
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- Ensembl
- UniProt
- NCBI
U2AF1
U2 small nuclear RNA auxiliary factor 1
- Use as query
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- Ensembl
- UniProt
- NCBI
LSM4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBMX
RNA binding motif protein X-linked
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- Use pair as query
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- Ensembl
- UniProt
- NCBI
BCLAF1
BCL2 associated transcription factor 1
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- Ensembl
- UniProt
- NCBI
MATR3 (2 of 2)
matrin 3
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- Ensembl
- UniProt
- A0A1B0GX04
- B3KM87
- D6R991
- D6R9F3
- D6RAY2
- D6RBI2
- D6RBK5
- D6RBS2
- D6RE02
- D6REK4
- D6REM6
- D6RIA2
- H0Y8T4
- P43243
- Q68E03
- NCBI
RACK1
receptor for activated C kinase 1
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- Ensembl
- UniProt
- D6R909
- D6R9L0
- D6R9Z1
- D6RAC2
- D6RAU2
- D6RBD0
- D6RDI0
- D6REE5
- D6RF23
- D6RFX4
- D6RFZ9
- D6RGK8
- D6RHH4
- D6RHJ5
- E9PD14
- H0Y8R5
- H0Y8W2
- H0Y9P0
- H0YAF8
- H0YAM7
- J3KPE3
- P63244
- NCBI
PRPF19
pre-mRNA processing factor 19
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CUL4B
cullin 4B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
C1orf146
chromosome 1 open reading frame 146
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000213516 | ENSG00000213516 | RBMX like 1 | ||
| A0A1B0GUK8 Q96E39 | ||||
| 494115 | ||||
| Spliceosome |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
23
|
ILF2 | ENSG00000143621 | interleukin enhancer binding factor 2 | ||
| A0A0A0MRL0 B4DY09 Q12905 X6R6Z1 | ||||
| 3608 | ||||
19
|
LSM7 | ENSG00000130332 | LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| A0A087X2I5 K7EML7 K7ENY5 Q9UK45 | ||||
| 51690 | ||||
| RNA degradation Spliceosome | ||||
24
|
HNRNPK | ENSG00000165119 | heterogeneous nuclear ribonucleoprotein K | ||
| P61978 Q5T6W2 S4R359 S4R457 | ||||
| 3190 | ||||
| Spliceosome | ||||
22
|
WDR3 | ENSG00000065183 | WD repeat domain 3 | ||
| Q6PDA5 Q9UNX4 | ||||
| 10885 | ||||
| Ribosome biogenesis in eukaryotes | ||||
23
|
CDC40 | ENSG00000168438 | cell division cycle 40 | ||
| O60508 Q5SRN1 | ||||
| 51362 | ||||
| Spliceosome | ||||
24
|
SF3B4 | ENSG00000143368 | splicing factor 3b subunit 4 | ||
| Q15427 Q5SZ64 | ||||
| 10262 | ||||
| Spliceosome | ||||
22
|
MCM2 | ENSG00000073111 | minichromosome maintenance complex component 2 | ||
| C9J013 C9JZ21 F8WDM3 H0Y8E6 H7C4N9 P49736 | ||||
| 4171 | ||||
| Cell cycle | ||||
| DNA replication | ||||
17
|
LARP7 | ENSG00000174720 | La ribonucleoprotein 7, transcriptional regulator | ||
| D6R9Z6 D6RAF3 D6RBH8 D6RF22 D6RF49 D6RFF0 H0YA82 Q4G0J3 | ||||
| 51574 | ||||
21
|
SFPQ | ENSG00000116560 | splicing factor proline and glutamine rich | ||
| H0Y9K7 H0Y9U2 P23246 | ||||
| 6421 | ||||
13
|
CLK2 | ENSG00000176444 | CDC like kinase 2 | ||
| B1AVT0 P49760 | ||||
| 1196 | ||||
10
|
MATR3 (1 of 2) | ENSG00000280987 | matrin 3 | ||
| A0A0R4J2E8 A8MXP9 B3KM87 D6R8Z5 D6R9N0 D6RAM9 D6RB45 D6RCM3 | ||||
| 9782 | ||||
27
|
ALYREF | ENSG00000183684 | Aly/REF export factor | ||
| E9PB61 Q86V81 | ||||
| 10189 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
18
|
PPP1CB | ENSG00000213639 | protein phosphatase 1 catalytic subunit beta | ||
| C9J9S3 C9JP48 E7ETD8 F8WE71 H0Y3Y6 P62140 | ||||
| 5500 | ||||
| Long-term potentiation Focal adhesion Oocyte meiosis cAMP signaling pathway cGMP-PKG signaling pathway Adrenergic signaling in cardiomyocytes Dopaminergic synapse Vascular smooth muscle contraction Hippo signaling pathway Insulin signaling pathway Oxytocin signaling pathway | ||||
| mRNA surveillance pathway | ||||
17
|
PLAA | ENSG00000137055 | phospholipase A2 activating protein | ||
| E5RIM3 H0YAU9 H0YBW4 H0YC16 Q9Y263 | ||||
| 9373 | ||||
| Protein processing in endoplasmic reticulum | ||||
23
|
LSM6 | ENSG00000164167 | LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| P62312 | ||||
| 11157 | ||||
| RNA degradation Spliceosome | ||||
18
|
SNRNP70 | ENSG00000104852 | small nuclear ribonucleoprotein U1 subunit 70 | ||
| M0QX04 M0QYR1 P08621 | ||||
| 6625 | ||||
| Spliceosome | ||||
22
|
SRSF9 | ENSG00000111786 | serine and arginine rich splicing factor 9 | ||
| H0YIB4 Q13242 S4R3G0 | ||||
| 8683 | ||||
| Spliceosome | ||||
23
|
MCM5 | ENSG00000100297 | minichromosome maintenance complex component 5 | ||
| B1AHA9 B1AHB1 B1AHB2 F8WFD7 P33992 | ||||
| 4174 | ||||
| Cell cycle | ||||
| DNA replication | ||||
24
|
PCBP1 | ENSG00000169564 | poly(rC) binding protein 1 | ||
| Q15365 | ||||
| 5093 | ||||
| Spliceosome | ||||
18
|
PPIL3 | ENSG00000240344 | peptidylprolyl isomerase like 3 | ||
| B8ZZ77 C9J4N2 C9K058 F8WC82 H7BZ14 Q9H2H8 | ||||
| 53938 | ||||
24
|
SRSF1 | ENSG00000136450 | serine and arginine rich splicing factor 1 | ||
| J3KSR8 J3KSW7 J3KTL2 J3QQV5 Q07955 | ||||
| 6426 | ||||
| IL-17 signaling pathway | ||||
| Spliceosome | ||||
25
|
U2AF1 | ENSG00000160201 | U2 small nuclear RNA auxiliary factor 1 | ||
| A0A1B0GW87 Q01081 | ||||
| 102724594 7307 | ||||
| Spliceosome | ||||
20
|
LSM4 | ENSG00000130520 | LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| M0QXB0 Q9Y4Z0 U3KQK1 V9GZ56 | ||||
| 25804 | ||||
| RNA degradation Spliceosome | ||||
19
|
RBMX | ENSG00000147274 | RNA binding motif protein X-linked | ||
| H0Y6E7 H3BNC1 H3BR27 H3BT71 H3BUY5 P38159 | ||||
| 27316 | ||||
| Spliceosome | ||||
6
|
BCLAF1 | ENSG00000029363 | BCL2 associated transcription factor 1 | ||
| A0A1W2PQ43 E9PJA7 E9PK09 E9PK91 E9PKI6 E9PQN2 H0YF00 H0YF14 H0YF63 Q9NYF8 | ||||
| 9774 | ||||
5
|
MATR3 (2 of 2) | ENSG00000015479 | matrin 3 | ||
| A0A1B0GX04 B3KM87 D6R991 D6R9F3 D6RAY2 D6RBI2 D6RBK5 D6RBS2 D6RE02 D6REK4 D6REM6 D6RIA2 H0Y8T4 P43243 Q68E03 | ||||
| 9782 | ||||
25
|
RACK1 | ENSG00000204628 | receptor for activated C kinase 1 | ||
| D6R909 D6R9L0 D6R9Z1 D6RAC2 D6RAU2 D6RBD0 D6RDI0 D6REE5 D6RF23 D6RFX4 D6RFZ9 D6RGK8 D6RHH4 D6RHJ5 E9PD14 H0Y8R5 H0Y8W2 H0Y9P0 H0YAF8 H0YAM7 J3KPE3 P63244 | ||||
| 10399 | ||||
25
|
PRPF19 | ENSG00000110107 | pre-mRNA processing factor 19 | ||
| F5GY56 F5H2I0 H0YGF3 H0YGZ5 Q9UMS4 | ||||
| 27339 | ||||
| Spliceosome Ubiquitin mediated proteolysis | ||||
8
|
CUL4B | ENSG00000158290 | cullin 4B | ||
| A6NE76 K4DI93 Q13620 | ||||
| 8450 | ||||
| Ubiquitin mediated proteolysis Nucleotide excision repair | ||||
1
|
C1orf146 | ENSG00000203910 | chromosome 1 open reading frame 146 | ||
| Q5VVC0 X6R7K4 | ||||
| 388649 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
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jSquid_subnetworks.xml | 295.65 KB | |
H.sapiens_subnetwork.tsv | 51.45 KB |