- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000204392
- LSM2 homolog, U6 small …
- LSM6
- LSM6 homolog, U6 small …
- 1.000
- PPI
- LSM7
- LSM7 homolog, U6 small …
- 1.000
- PPI
- LSM5
- LSM5 homolog, U6 small …
- 1.000
- PPI
- SNRPD2
- small nuclear ribonucle…
- 1.000
- PPI
- LSM4
- LSM4 homolog, U6 small …
- 1.000
- PPI
- LSM8
- LSM8 homolog, U6 small …
- 1.000
- PPI
- SNRPE
- small nuclear ribonucle…
- 1.000
- PPI
- LSM3
- LSM3 homolog, U6 small …
- 1.000
- PPI
- SNRPF
- small nuclear ribonucle…
- 1.000
- PPI
- LSM1
- LSM1 homolog, mRNA degr…
- 1.000
- PPI
- PRPF8
- pre-mRNA processing fac…
- 1.000
- PPI
- SNRPD1
- small nuclear ribonucle…
- 1.000
- PPI
- PRPF31
- pre-mRNA processing fac…
- 1.000
- PPI
- SNRPD3
- small nuclear ribonucle…
- 1.000
- Metabolic
- PRPF3
- pre-mRNA processing fac…
- 1.000
- PPI
- SNRPG
- small nuclear ribonucle…
- 1.000
- Metabolic
- SNU13
- small nuclear ribonucle…
- 1.000
- Metabolic
- PRPF4
- pre-mRNA processing fac…
- 1.000
- PPI
- SF3B2
- splicing factor 3b subu…
- 1.000
- PPI
- SNRNP200
- small nuclear ribonucle…
- 1.000
- PPI
- PATL1
- PAT1 homolog 1, process…
- 1.000
- Complex
- EFTUD2
- elongation factor Tu GT…
- 1.000
- PPI
- EEF1A1
- eukaryotic translation …
- 1.000
- Metabolic
- SART3
- spliceosome associated …
- 1.000
- PPI
- RPL27
- ribosomal protein L27
- 1.000
- Complex
- TUBB
- tubulin beta class I
- 1.000
- Metabolic
- RPL35
- ribosomal protein L35
- 1.000
- Metabolic
- RPLP0
- ribosomal protein later…
- 1.000
- Metabolic
- SNRPB
- small nuclear ribonucle…
- 1.000
- PPI
- H2AX
- H2A.X variant histone
- 1.000
- Metabolic
ENSG00000204392
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SART3
spliceosome associated factor 3, U4/U6 recycling protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPL27
ribosomal protein L27
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF3
pre-mRNA processing factor 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF31
pre-mRNA processing factor 31
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EFTUD2
elongation factor Tu GTP binding domain containing 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPF
small nuclear ribonucleoprotein polypeptide F
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPD1
small nuclear ribonucleoprotein D1 polypeptide
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPL35
ribosomal protein L35
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF4
pre-mRNA processing factor 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF8
pre-mRNA processing factor 8
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EEF1A1
eukaryotic translation elongation factor 1 alpha 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM1
LSM1 homolog, mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRNP200
small nuclear ribonucleoprotein U5 subunit 200
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPD3
small nuclear ribonucleoprotein D3 polypeptide
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPB
small nuclear ribonucleoprotein polypeptides B and B1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM8
LSM8 homolog, U6 small nuclear RNA associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPG
small nuclear ribonucleoprotein polypeptide G
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SF3B2
splicing factor 3b subunit 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPD2
small nuclear ribonucleoprotein D2 polypeptide
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PATL1
PAT1 homolog 1, processing body mRNA decay factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPLP0
ribosomal protein lateral stalk subunit P0
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
H2AX
H2A.X variant histone
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TUBB
tubulin beta class I
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPE
small nuclear ribonucleoprotein polypeptide E
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNU13
small nuclear ribonucleoprotein 13
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000204392 | ENSG00000204392 | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| Q9Y333 | ||||
| 57819 | ||||
| RNA degradation Spliceosome |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
25
|
SART3 | ENSG00000075856 | spliceosome associated factor 3, U4/U6 recycling protein | ||
| A0A494C0L2 A0A499FI31 F8VVK9 F8VZM2 F8W667 H0YHU8 Q15020 | ||||
| 9733 | ||||
30
|
LSM4 | ENSG00000130520 | LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| M0QXB0 Q9Y4Z0 U3KQK1 V9GZ56 | ||||
| 25804 | ||||
| RNA degradation Spliceosome | ||||
28
|
RPL27 | ENSG00000131469 | ribosomal protein L27 | ||
| K7ELC7 K7EQQ9 K7ERY7 P61353 | ||||
| 6155 | ||||
| Ribosome | ||||
28
|
PRPF3 | ENSG00000117360 | pre-mRNA processing factor 3 | ||
| O43395 | ||||
| 9129 | ||||
| Spliceosome | ||||
30
|
LSM7 | ENSG00000130332 | LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| A0A087X2I5 K7EML7 K7ENY5 Q9UK45 | ||||
| 51690 | ||||
| RNA degradation Spliceosome | ||||
29
|
PRPF31 | ENSG00000105618 | pre-mRNA processing factor 31 | ||
| E7EN72 E7ESX0 E7EU94 E7EVX8 Q8WWY3 | ||||
| 26121 | ||||
| Spliceosome | ||||
28
|
EFTUD2 | ENSG00000108883 | elongation factor Tu GTP binding domain containing 2 | ||
| K7EIT3 K7EIV5 K7EJ74 K7EP67 K7EQ26 K7ERJ5 Q15029 | ||||
| 9343 | ||||
| Spliceosome | ||||
30
|
SNRPF | ENSG00000139343 | small nuclear ribonucleoprotein polypeptide F | ||
| A0A0B4J254 F8W0W6 P62306 | ||||
| 6636 | ||||
| Spliceosome | ||||
30
|
SNRPD1 | ENSG00000167088 | small nuclear ribonucleoprotein D1 polypeptide | ||
| J3QLI9 J3QLR7 P62314 | ||||
| 6632 | ||||
| Spliceosome | ||||
25
|
RPL35 | ENSG00000136942 | ribosomal protein L35 | ||
| F2Z388 P42766 | ||||
| 11224 | ||||
| Ribosome | ||||
30
|
LSM6 | ENSG00000164167 | LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| P62312 | ||||
| 11157 | ||||
| RNA degradation Spliceosome | ||||
30
|
LSM3 | ENSG00000170860 | LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| P62310 | ||||
| 27258 | ||||
| RNA degradation Spliceosome | ||||
30
|
LSM5 | ENSG00000106355 | LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| B8ZZF8 F8W8Y8 Q9Y4Y9 | ||||
| 23658 | ||||
| RNA degradation Spliceosome | ||||
28
|
PRPF4 | ENSG00000136875 | pre-mRNA processing factor 4 | ||
| O43172 | ||||
| 9128 | ||||
| Spliceosome | ||||
30
|
PRPF8 | ENSG00000174231 | pre-mRNA processing factor 8 | ||
| I3L0J9 I3L1T8 I3L3Z8 Q6P2Q9 | ||||
| 10594 | ||||
| Spliceosome | ||||
29
|
EEF1A1 | ENSG00000156508 | eukaryotic translation elongation factor 1 alpha 1 | ||
| A0A087WV01 A0A087WVQ9 A6PW80 P68104 Q5JR01 | ||||
| 1915 | ||||
| RNA transport | ||||
22
|
LSM1 | ENSG00000175324 | LSM1 homolog, mRNA degradation associated | ||
| E5RH18 E5RJ47 O15116 | ||||
| 27257 | ||||
| RNA degradation | ||||
30
|
SNRNP200 | ENSG00000144028 | small nuclear ribonucleoprotein U5 subunit 200 | ||
| A0A494C1A5 O75643 | ||||
| 23020 | ||||
| Spliceosome | ||||
30
|
SNRPD3 | ENSG00000100028 | small nuclear ribonucleoprotein D3 polypeptide | ||
| P62318 | ||||
| 6634 | ||||
| Spliceosome | ||||
21
|
SNRPB | ENSG00000125835 | small nuclear ribonucleoprotein polypeptides B and B1 | ||
| P14678 S4R3P3 | ||||
| 6628 | ||||
| Spliceosome | ||||
29
|
LSM8 | ENSG00000128534 | LSM8 homolog, U6 small nuclear RNA associated | ||
| C9JIZ0 C9JNV3 F2Z2Y6 O95777 | ||||
| 51691 | ||||
| RNA degradation Spliceosome | ||||
30
|
SNRPG | ENSG00000143977 | small nuclear ribonucleoprotein polypeptide G | ||
| C9JVQ0 F5H013 P62308 Q49AN9 | ||||
| 6637 | ||||
| Spliceosome | ||||
27
|
SF3B2 | ENSG00000087365 | splicing factor 3b subunit 2 | ||
| E9PIL8 E9PJ04 E9PJT3 E9PPJ0 H0YCG1 H0YEX5 Q13435 | ||||
| 10992 | ||||
| Spliceosome | ||||
30
|
SNRPD2 | ENSG00000125743 | small nuclear ribonucleoprotein D2 polypeptide | ||
| K7EJB5 K7ERG4 P62316 | ||||
| 6633 | ||||
| Spliceosome | ||||
28
|
PATL1 | ENSG00000166889 | PAT1 homolog 1, processing body mRNA decay factor | ||
| Q86TB9 | ||||
| 219988 | ||||
| RNA degradation | ||||
27
|
RPLP0 | ENSG00000089157 | ribosomal protein lateral stalk subunit P0 | ||
| F8VPE8 F8VQY6 F8VRK7 F8VS58 F8VU65 F8VW21 F8VWS0 F8VWV4 F8VYN4 F8VZS0 F8W1K8 G3V210 P05388 | ||||
| 6175 | ||||
| Ribosome | ||||
24
|
H2AX | ENSG00000188486 | H2A.X variant histone | ||
| P16104 | ||||
| 3014 | ||||
26
|
TUBB | ENSG00000196230 | tubulin beta class I | ||
| P07437 Q5JP53 Q5ST81 | ||||
| 203068 | ||||
| Gap junction | ||||
| Phagosome | ||||
30
|
SNRPE | ENSG00000182004 | small nuclear ribonucleoprotein polypeptide E | ||
| A6NHK2 P62304 | ||||
| 6635 | ||||
| Spliceosome | ||||
28
|
SNU13 | ENSG00000100138 | small nuclear ribonucleoprotein 13 | ||
| A0A3B3IRU2 A0A3B3ISH1 A0A3B3ISH9 A0A3B3ISK4 A0A3B3IUA2 B1AHD1 P55769 | ||||
| 4809 | ||||
| Ribosome biogenesis in eukaryotes Spliceosome |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
- Add to current query
jSquid_subnetworks.xml | 357.39 KB | |
H.sapiens_subnetwork.tsv | 85.02 KB |