Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000197565
- collagen type IV alpha …
- PLOD1
- procollagen-lysine,2-ox…
- 0.961
- PPI
- MMP2
- matrix metallopeptidase…
- 0.872
- PPI
- NOTCH1
- notch receptor 1
- 0.703
- PPI
- COL8A2
- collagen type VIII alph…
- 0.445
- PPI
- LOXL1
- lysyl oxidase like 1
- 0.437
- Signaling
Subnetwork gene interactions
ENSG00000197565
collagen type IV alpha 6 chain
FunCoup
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- Ensembl
- UniProt
- NCBI
LOXL1
lysyl oxidase like 1
FunCoup
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- Ensembl
- UniProt
- NCBI
MMP2
matrix metallopeptidase 2
FunCoup
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- Ensembl
- UniProt
- NCBI
NOTCH1
notch receptor 1
FunCoup
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- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
COL8A2
collagen type VIII alpha 2 chain
FunCoup
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- Ensembl
- UniProt
- NCBI
PLOD1
procollagen-lysine,2-oxoglutarate 5-dioxygenase 1
FunCoup
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- Use pair as query
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- Ensembl
- UniProt
- NCBI
Query genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
5
|
ENSG00000197565 | ENSG00000197565 | collagen type IV alpha 6 chain | ||
| A0A087WZY5 A8MXH5 F5H3Q5 F5H851 Q14031 | ||||
| 1288 | ||||
| ECM-receptor interaction Focal adhesion Relaxin signaling pathway PI3K-Akt signaling pathway | ||||
| Protein digestion and absorption |
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
1
|
LOXL1 | ENSG00000129038 | lysyl oxidase like 1 | ||
| H3BUV8 Q08397 | ||||
| 4016 | ||||
1
|
MMP2 | ENSG00000087245 | matrix metallopeptidase 2 | ||
| H3BR66 H3BS34 H3BV48 J3KRB7 P08253 | ||||
| 4313 | ||||
| Leukocyte transendothelial migration Relaxin signaling pathway Estrogen signaling pathway GnRH signaling pathway | ||||
1
|
NOTCH1 | ENSG00000148400 | notch receptor 1 | ||
| P46531 | ||||
| 4851 | ||||
| Thyroid hormone signaling pathway Notch signaling pathway | ||||
1
|
COL8A2 | ENSG00000171812 | collagen type VIII alpha 2 chain | ||
| E9PP49 P25067 | ||||
| 1296 | ||||
1
|
PLOD1 | ENSG00000083444 | procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 | ||
| Q02809 Q5JXB7 Q5JXB8 | ||||
| 5351 | ||||
| Lysine degradation |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
Copied subnetwork genes to clipboard
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jSquid_subnetworks.xml | 81.37 KB | |
H.sapiens_subnetwork.tsv | 1.20 KB |