Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000196542
- serine palmitoyltransfe…
- MSH2
- mutS homolog 2
- 0.940
- PPI
- SPTLC3
- serine palmitoyltransfe…
- 0.802
- PPI
- SPTLC2
- serine palmitoyltransfe…
- 0.511
- PPI
- SPTLC1
- serine palmitoyltransfe…
- 0.488
- PPI
Subnetwork gene interactions
ENSG00000196542
serine palmitoyltransferase small subunit B
FunCoup
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- Ensembl
- UniProt
- NCBI
SPTLC1
serine palmitoyltransferase long chain base subunit 1
FunCoup
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- Use pair as query
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- Ensembl
- UniProt
- NCBI
SPTLC3
serine palmitoyltransferase long chain base subunit 3
FunCoup
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- Ensembl
- UniProt
- NCBI
SPTLC2
serine palmitoyltransferase long chain base subunit 2
FunCoup
- Use as query
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- Ensembl
- UniProt
- NCBI
MSH2
mutS homolog 2
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Query genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
4
|
ENSG00000196542 | ENSG00000196542 | serine palmitoyltransferase small subunit B | ||
| Q6ZWB5 Q8NFR3 | ||||
| 165679 |
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
3
|
SPTLC1 | ENSG00000090054 | serine palmitoyltransferase long chain base subunit 1 | ||
| A0A2R8Y4S0 A0A2R8Y6A2 A0A2R8Y763 O15269 | ||||
| 10558 | ||||
| Sphingolipid signaling pathway | ||||
| Sphingolipid metabolism | ||||
3
|
SPTLC3 | ENSG00000172296 | serine palmitoyltransferase long chain base subunit 3 | ||
| B1AKS2 B1AKS3 H0Y733 Q9NUV7 | ||||
| 55304 | ||||
| Sphingolipid signaling pathway | ||||
| Sphingolipid metabolism | ||||
3
|
SPTLC2 | ENSG00000100596 | serine palmitoyltransferase long chain base subunit 2 | ||
| H0YJ96 H0YJV2 O15270 | ||||
| 9517 | ||||
| Sphingolipid signaling pathway | ||||
| Sphingolipid metabolism | ||||
1
|
MSH2 | ENSG00000095002 | mutS homolog 2 | ||
| A0A2R8Y6P0 A0A2R8Y713 A0A2R8Y7S8 A0A2R8YFH0 A0A2R8YG02 C9J809 E9PHA6 P43246 | ||||
| 4436 | ||||
| Mismatch repair |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
Copied subnetwork genes to clipboard
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jSquid_subnetworks.xml | 84.70 KB | |
H.sapiens_subnetwork.tsv | 1.49 KB |