Found 1 of 1 query genes

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Query interactions

Interaction partners
Confidence
Network
MEX
PIN
SCL
PHP
MIR
TFB
PEX
GIN
DOM
QMS
GRG
Evidence types
HSA
MMU
RNO
CFA
GGA
DRE
CIN
DME
CEL
BTA
SCE
ATH
SPO
BSU
ECO
PFA
DDI
SSO
SSC
MJA
OSA
Species
In Gold st.

ID Query gene
ID Query ortholog

Log-likelihood ratio (LLR)
	Highly positive
	Positive
	Zero
	Negative
	Highly negative
Known coupling
	This network
	Other network

2. ENSG00000189401
3. OTU deubiquitinase 6A
- 2. NOP53
  3. NOP53 ribosome biogenes…
  4. 0.991
  5. Complex
- 2. DNAJC2
  3. DnaJ heat shock protein…
  4. 0.986
  5. Metabolic
- 2. BOP1
  3. BOP1 ribosomal biogenes…
  4. 0.971
  5. Metabolic
- 2. MAK16
  3. MAK16 homolog
  4. 0.966
  5. Metabolic
- 2. RPF2
  3. ribosome production fac…
  4. 0.962
  5. Complex
- 2. KRI1
  3. KRI1 homolog
  4. 0.956
  5. Metabolic
- 2. SF3A3
  3. splicing factor 3a subu…
  4. 0.955
  5. Metabolic
- 2. RPF1
  3. ribosome production fac…
  4. 0.950
  5. Metabolic
- 2. DCAF13
  3. DDB1 and CUL4 associate…
  4. 0.948
  5. Metabolic
- 2. NOC2L
  3. NOC2 like nucleolar ass…
  4. 0.936
  5. Metabolic
- 2. HARS2
  3. histidyl-tRNA synthetas…
  4. 0.933
  5. Metabolic
- 2. HARS1
  3. histidyl-tRNA synthetas…
  4. 0.932
  5. Metabolic
- 2. EIF3A
  3. eukaryotic translation …
  4. 0.932
  5. Metabolic
- 2. C12orf10
  3. MYG1 exonuclease
  4. 0.931
  5. Metabolic
- 2. RBM28
  3. RNA binding motif prote…
  4. 0.927
  5. Metabolic
- 2. BCCIP
  3. BRCA2 and CDKN1A intera…
  4. 0.924
  5. Metabolic
- 2. PPAN
  3. peter pan homolog
  4. 0.923
  5. Metabolic
- 2. EBNA1BP2
  3. EBNA1 binding protein 2
  4. 0.918
  5. Metabolic
- 2. RWDD1
  3. RWD domain containing 1
  4. 0.917
  5. Metabolic
- 2. TRMT6
  3. tRNA methyltransferase 6
  4. 0.913
  5. Metabolic
- 2. BCAS2
  3. BCAS2 pre-mRNA processi…
  4. 0.912
  5. Metabolic
- 2. IMP4
  3. IMP U3 small nucleolar …
  4. 0.912
  5. Complex
- 2. UTP11
  3. UTP11 small subunit pro…
  4. 0.911
  5. Metabolic
- 2. KLHDC4
  3. kelch domain containing…
  4. 0.909
  5. Metabolic
- 2. UTP3
  3. UTP3 small subunit proc…
  4. 0.888
  5. Metabolic
- 2. NIP7
  3. nucleolar pre-rRNA proc…
  4. 0.885
  5. Metabolic
- 2. EMG1
  3. EMG1 N1-specific pseudo…
  4. 0.884
  5. Metabolic
- 2. MRTO4
  3. MRT4 homolog, ribosome …
  4. 0.883
  5. Metabolic
- 2. DOHH
  3. deoxyhypusine hydroxyla…
  4. 0.877
  5. Metabolic
- 2. GPS1
  3. G protein pathway suppr…
  4. 0.873
  5. Metabolic

Subnetwork gene interactions

ENSG00000189401

OTU deubiquitinase 6A

FunCoup

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Ensembl

ENSG00000189401

UniProt

Q7L8S5

NCBI

139562

GPS1

G protein pathway suppressor 1

FunCoup

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Ensembl

ENSG00000169727

UniProt

NCBI

2873

DNAJC2

DnaJ heat shock protein family (Hsp40) member C2

FunCoup

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Ensembl

ENSG00000105821

UniProt

NCBI

27000

C12orf10

MYG1 exonuclease

FunCoup

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Ensembl

ENSG00000139637

UniProt

NCBI

SF3A3

splicing factor 3a subunit 3

FunCoup

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Ensembl

ENSG00000183431

UniProt

Q12874

NCBI

10946

EMG1

EMG1 N1-specific pseudouridine methyltransferase

FunCoup

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Ensembl

ENSG00000126749

UniProt

NCBI

10436

RPF2

ribosome production factor 2 homolog

FunCoup

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Ensembl

ENSG00000197498

UniProt

NCBI

84154

RPF1

ribosome production factor 1 homolog

FunCoup

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Ensembl

ENSG00000117133

UniProt

NCBI

80135

RBM28

RNA binding motif protein 28

FunCoup

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Ensembl

ENSG00000106344

UniProt

NCBI

55131

EIF3A

eukaryotic translation initiation factor 3 subunit A

FunCoup

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Ensembl

ENSG00000107581

UniProt

Q14152

NCBI

8661

UTP3

UTP3 small subunit processome component

FunCoup

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Ensembl

ENSG00000132467

UniProt

Q9NQZ2

NCBI

57050

TRMT6

tRNA methyltransferase 6

FunCoup

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Ensembl

ENSG00000089195

UniProt

Q9UJA5

NCBI

51605

MRTO4

MRT4 homolog, ribosome maturation factor

FunCoup

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Ensembl

ENSG00000053372

UniProt

Q9UKD2

NCBI

51154

NOC2L

NOC2 like nucleolar associated transcriptional repressor

FunCoup

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Ensembl

ENSG00000188976

UniProt

Q9Y3T9

NCBI

26155

HARS2

histidyl-tRNA synthetase 2, mitochondrial

FunCoup

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Ensembl

ENSG00000112855

UniProt

NCBI

23438

BOP1

BOP1 ribosomal biogenesis factor

FunCoup

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Ensembl

ENSG00000261236

UniProt

NCBI

23246

UTP11

UTP11 small subunit processome component

FunCoup

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Ensembl

ENSG00000183520

UniProt

Q9Y3A2

NCBI

51118

RWDD1

RWD domain containing 1

FunCoup

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Ensembl

ENSG00000111832

UniProt

NCBI

51389

BCCIP

BRCA2 and CDKN1A interacting protein

FunCoup

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Ensembl

ENSG00000107949

UniProt

Q9P287

NCBI

56647

BCAS2

BCAS2 pre-mRNA processing factor

FunCoup

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Ensembl

ENSG00000116752

UniProt

O75934

NCBI

10286

DOHH

deoxyhypusine hydroxylase

FunCoup

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Ensembl

ENSG00000129932

UniProt

NCBI

83475

KLHDC4

kelch domain containing 4

FunCoup

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Ensembl

ENSG00000104731

UniProt

NCBI

54758

KRI1

KRI1 homolog

FunCoup

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Ensembl

ENSG00000129347

UniProt

NCBI

65095

MAK16

MAK16 homolog

FunCoup

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Ensembl

ENSG00000198042

UniProt

NCBI

84549

EBNA1BP2

EBNA1 binding protein 2

FunCoup

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Ensembl

ENSG00000117395

UniProt

NCBI

10969

NOP53

NOP53 ribosome biogenesis factor

FunCoup

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Ensembl

ENSG00000105373

UniProt

NCBI

29997

HARS1

histidyl-tRNA synthetase 1

FunCoup

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Ensembl

ENSG00000170445

UniProt

NCBI

3035

PPAN

peter pan homolog

FunCoup

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Ensembl

ENSG00000130810

UniProt

NCBI

56342
692312

NIP7

nucleolar pre-rRNA processing protein NIP7

FunCoup

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Ensembl

ENSG00000132603

UniProt

NCBI

51388

IMP4

IMP U3 small nucleolar ribonucleoprotein 4

FunCoup

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Ensembl

ENSG00000136718

UniProt

NCBI

92856

DCAF13

DDB1 and CUL4 associated factor 13

FunCoup

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Ensembl

ENSG00000164934

UniProt

NCBI

25879

Query genes

		Identifier	Description
30	ENSG00000189401	ENSG00000189401	OTU deubiquitinase 6A
		UniProt	Q7L8S5
		NCBI	139562

Subnetwork genes

		Identifier	Description
29	GPS1	ENSG00000169727	G protein pathway suppressor 1
		UniProt	A0A096LP07 A0A096LPJ3 A8K070 C9JFE4 J3KRE8 J3KRJ4 J3KRY5 J3KSA5 J3KSY1 J3KTB0 J3QL53 J3QLE8 J3QLT0 J3QQP2 J3QQX0 J3QS84 J3QS88 Q13098
		NCBI	2873
30	DNAJC2	ENSG00000105821	DnaJ heat shock protein family (Hsp40) member C2
		UniProt	C9IZ83 F2Z3H0 F2Z3N9 H7C3L7 Q99543
		NCBI	27000
26	C12orf10	ENSG00000139637	MYG1 exonuclease
		UniProt	F8VQQ3 F8VR84 H3BPH3 Q9HB07
29	SF3A3	ENSG00000183431	splicing factor 3a subunit 3
		UniProt	Q12874
		NCBI	10946
		KEGG metabolic	Spliceosome
30	EMG1	ENSG00000126749	EMG1 N1-specific pseudouridine methyltransferase
		UniProt	A0A087WVM7 A0A087WWQ2 Q92979 V9GYP5
		NCBI	10436
		KEGG metabolic	Ribosome biogenesis in eukaryotes
30	RPF2	ENSG00000197498	ribosome production factor 2 homolog
		UniProt	Q5VXM9 Q5VXN0 Q9H7B2 U3KQN5
		NCBI	84154
29	RPF1	ENSG00000117133	ribosome production factor 1 homolog
		UniProt	Q9H9Y2 X6R7Q1
		NCBI	80135
30	RBM28	ENSG00000106344	RNA binding motif protein 28
		UniProt	C9JAA9 C9JE21 H7C5G8 Q9NW13
		NCBI	55131
		KEGG metabolic	Ribosome biogenesis in eukaryotes
29	EIF3A	ENSG00000107581	eukaryotic translation initiation factor 3 subunit A
		UniProt	Q14152
		NCBI	8661
		KEGG metabolic	RNA transport
30	UTP3	ENSG00000132467	UTP3 small subunit processome component
		UniProt	Q9NQZ2
		NCBI	57050
30	TRMT6	ENSG00000089195	tRNA methyltransferase 6
		UniProt	Q9UJA5
		NCBI	51605
30	MRTO4	ENSG00000053372	MRT4 homolog, ribosome maturation factor
		UniProt	Q9UKD2
		NCBI	51154
30	NOC2L	ENSG00000188976	NOC2 like nucleolar associated transcriptional repressor
		UniProt	Q9Y3T9
		NCBI	26155
28	HARS2	ENSG00000112855	histidyl-tRNA synthetase 2, mitochondrial
		UniProt	A0A2R8Y3N3 A0A2R8Y4X6 A0A2R8Y5E8 A0A2R8Y5P7 A0A2R8Y6I1 B4DQ67 D6R9M5 D6RB22 D6RJE6 P49590
		NCBI	23438
		KEGG metabolic	Aminoacyl-tRNA biosynthesis
30	BOP1	ENSG00000261236	BOP1 ribosomal biogenesis factor
		UniProt	A0A075B729 Q14137
		NCBI	23246
30	UTP11	ENSG00000183520	UTP11 small subunit processome component
		UniProt	Q9Y3A2
		NCBI	51118
29	RWDD1	ENSG00000111832	RWD domain containing 1
		UniProt	E5RGQ3 E5RGS5 E5RJE3 Q9H446
		NCBI	51389
29	BCCIP	ENSG00000107949	BRCA2 and CDKN1A interacting protein
		UniProt	Q9P287
		NCBI	56647
30	BCAS2	ENSG00000116752	BCAS2 pre-mRNA processing factor
		UniProt	O75934
		NCBI	10286
		KEGG metabolic	Spliceosome
29	DOHH	ENSG00000129932	deoxyhypusine hydroxylase
		UniProt	A0A5F9ZGM7 A0A5F9ZHG4 Q9BU89
		NCBI	83475
30	KLHDC4	ENSG00000104731	kelch domain containing 4
		UniProt	H3BP99 H3BQ90 H3BQH3 H3BQL0 H3BTB1 H3BUX8 H3BV82 Q86VH3 Q8TBB5 Q9UF94
		NCBI	54758
29	KRI1	ENSG00000129347	KRI1 homolog
		UniProt	A0A494C108 F8WFC1 H0YFD2 H0YG91 H0YH26 Q8N9T8
		NCBI	65095
30	MAK16	ENSG00000198042	MAK16 homolog
		UniProt	H0YBV6 Q9BXY0
		NCBI	84549
30	EBNA1BP2	ENSG00000117395	EBNA1 binding protein 2
		UniProt	H7C2Q8 Q99848
		NCBI	10969
30	NOP53	ENSG00000105373	NOP53 ribosome biogenesis factor
		UniProt	M0QX73 M0QYZ9 M0QZ34 M0QZU5 Q9NZM5
		NCBI	29997
29	HARS1	ENSG00000170445	histidyl-tRNA synthetase 1
		UniProt	A0A2R8YCI2 A0A2R8YFR1 B3KWE1 B4DDD8 B4E1C5 D6RF05 E7ETE2 P12081
		NCBI	3035
		KEGG metabolic	Aminoacyl-tRNA biosynthesis
30	PPAN	ENSG00000130810	peter pan homolog
		UniProt	A8MV53 C9J3W3 C9JHF7 H7C446 Q9NQ55
		NCBI	56342 692312
30	NIP7	ENSG00000132603	nucleolar pre-rRNA processing protein NIP7
		UniProt	J3QLW7 J3QRD6 J3QRR4 Q9Y221
		NCBI	51388
29	IMP4	ENSG00000136718	IMP U3 small nucleolar ribonucleoprotein 4
		UniProt	B8ZZ47 B9A008 E7ENR5 F8WCN0 H0Y714 Q96G21
		NCBI	92856
		KEGG metabolic	Ribosome biogenesis in eukaryotes
30	DCAF13	ENSG00000164934	DDB1 and CUL4 associated factor 13
		UniProt	A0A087WT20 A0A087X1F8 B3KME9 E5RHM4 Q9NV06
		NCBI	25879

Enrichment analysis

Search for enrichment of pathways or functional gene sets for your subnetwork genes

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	jSquid_subnetworks.xml	319.89 KB
	H.sapiens_subnetwork.tsv	86.73 KB

Species:

Network information:

Filter Results:

Network appearance:

ENSG00000189401

GPS1

DNAJC2

C12orf10

SF3A3

EMG1

RPF2

RPF1

RBM28

EIF3A

UTP3

TRMT6

MRTO4

NOC2L

HARS2

BOP1

UTP11

RWDD1

BCCIP

BCAS2

DOHH

KLHDC4

KRI1

MAK16

EBNA1BP2

NOP53

HARS1

PPAN

NIP7

IMP4

DCAF13

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