- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000176102
- cleavage stimulation fa…
- CSTF2
- cleavage stimulation fa…
- 1.000
- Complex
- CPSF1
- cleavage and polyadenyl…
- 1.000
- Complex
- CDC73
- cell division cycle 73
- 0.999
- PPI
- CPSF2
- cleavage and polyadenyl…
- 0.999
- Complex
- SYMPK
- symplekin
- 0.999
- Complex
- CPSF3
- cleavage and polyadenyl…
- 0.998
- PPI
- CPSF4
- cleavage and polyadenyl…
- 0.998
- PPI
- CSTF2T
- cleavage stimulation fa…
- 0.994
- Metabolic
- ESF1
- ESF1 nucleolar pre-rRNA…
- 0.993
- Metabolic
- MTREX
- Mtr4 exosome RNA helica…
- 0.993
- Metabolic
- CDK4
- cyclin dependent kinase…
- 0.993
- PPI
- NPM1
- nucleophosmin 1
- 0.991
- PPI
- TTC4
- tetratricopeptide repea…
- 0.989
- Metabolic
- RAD1
- RAD1 checkpoint DNA exo…
- 0.988
- Metabolic
- RTF1
- RTF1 homolog, Paf1/RNA …
- 0.987
- Metabolic
- DHX37
- DEAH-box helicase 37
- 0.984
- Metabolic
- SUPT5H
- SPT5 homolog, DSIF elon…
- 0.981
- Metabolic
- CLK2
- CDC like kinase 2
- 0.979
- Metabolic
- PNN
- pinin, desmosome associ…
- 0.978
- Metabolic
- SF3A3
- splicing factor 3a subu…
- 0.976
- Metabolic
- RNMT
- RNA guanine-7 methyltra…
- 0.976
- Metabolic
- SF3B2
- splicing factor 3b subu…
- 0.975
- Metabolic
- PPWD1
- peptidylprolyl isomeras…
- 0.974
- Complex
- PRPF4
- pre-mRNA processing fac…
- 0.974
- Metabolic
- SMARCAD1
- SWI/SNF-related, matrix…
- 0.974
- Metabolic
- DNAJC9
- DnaJ heat shock protein…
- 0.973
- Metabolic
- CDK8
- cyclin dependent kinase…
- 0.972
- Metabolic
- TCEA1
- transcription elongatio…
- 0.972
- Complex
- NCBP1
- nuclear cap binding pro…
- 0.972
- Complex
- SRRT
- serrate, RNA effector m…
- 0.970
- Metabolic
ENSG00000176102
cleavage stimulation factor subunit 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SYMPK
symplekin
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
MTREX
Mtr4 exosome RNA helicase
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SF3B2
splicing factor 3b subunit 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TTC4
tetratricopeptide repeat domain 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SUPT5H
SPT5 homolog, DSIF elongation factor subunit
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DNAJC9
DnaJ heat shock protein family (Hsp40) member C9
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TCEA1
transcription elongation factor A1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SRRT
serrate, RNA effector molecule
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NCBP1
nuclear cap binding protein subunit 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SMARCAD1
SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CDK8
cyclin dependent kinase 8
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DHX37
DEAH-box helicase 37
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CDC73
cell division cycle 73
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RAD1
RAD1 checkpoint DNA exonuclease
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SF3A3
splicing factor 3a subunit 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CPSF4
cleavage and polyadenylation specific factor 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF4
pre-mRNA processing factor 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PNN
pinin, desmosome associated protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CSTF2T
cleavage stimulation factor subunit 2 tau variant
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PPWD1
peptidylprolyl isomerase domain and WD repeat containing 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CPSF3
cleavage and polyadenylation specific factor 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NPM1
nucleophosmin 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RNMT
RNA guanine-7 methyltransferase
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CPSF2
cleavage and polyadenylation specific factor 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CLK2
CDC like kinase 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CPSF1
cleavage and polyadenylation specific factor 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CDK4
cyclin dependent kinase 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CSTF2
cleavage stimulation factor subunit 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000176102 | ENSG00000176102 | cleavage stimulation factor subunit 3 | ||
| E9PJ06 E9PLP8 E9PNK2 H0YE74 Q12996 | ||||
| 1479 | ||||
| mRNA surveillance pathway |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
20
|
SYMPK | ENSG00000125755 | symplekin | ||
| A0A087WUE9 M0QXP5 M0R033 M0R039 M0R180 M0R1C2 M0R3C7 Q92797 | ||||
| 8189 | ||||
| Tight junction | ||||
| mRNA surveillance pathway | ||||
28
|
MTREX | ENSG00000039123 | Mtr4 exosome RNA helicase | ||
| D6REC7 H0Y8U3 H0YAC4 P42285 | ||||
| 23517 | ||||
| RNA degradation | ||||
26
|
SF3B2 | ENSG00000087365 | splicing factor 3b subunit 2 | ||
| E9PIL8 E9PJ04 E9PJT3 E9PPJ0 H0YCG1 H0YEX5 Q13435 | ||||
| 10992 | ||||
| Spliceosome | ||||
19
|
TTC4 | ENSG00000243725 | tetratricopeptide repeat domain 4 | ||
| O95801 | ||||
| 7268 | ||||
24
|
SUPT5H | ENSG00000196235 | SPT5 homolog, DSIF elongation factor subunit | ||
| M0QYL9 M0R105 M0R2M5 O00267 | ||||
| 6829 | ||||
27
|
DNAJC9 | ENSG00000213551 | DnaJ heat shock protein family (Hsp40) member C9 | ||
| Q8WXX5 | ||||
| 23234 | ||||
28
|
TCEA1 | ENSG00000187735 | transcription elongation factor A1 | ||
| A0A1W2PPV7 A0A1W2PPZ5 A0A1W2PRL9 A0A1W2PS15 B7Z4S1 E5RFI1 E5RIS7 E5RJ93 E5RK46 P23193 | ||||
| 6917 | ||||
20
|
RTF1 | ENSG00000137815 | RTF1 homolog, Paf1/RNA polymerase II complex component | ||
| H0YKX1 Q92541 | ||||
| 23168 | ||||
26
|
SRRT | ENSG00000087087 | serrate, RNA effector molecule | ||
| A0A087X0F4 A0A0A0MSP6 A0A286YEP7 C9JUL9 H7C0U8 H7C1K0 H7C3A1 Q9BXP5 | ||||
| 51593 | ||||
28
|
NCBP1 | ENSG00000136937 | nuclear cap binding protein subunit 1 | ||
| F2Z2T1 Q09161 X6R941 | ||||
| 4686 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
24
|
SMARCAD1 | ENSG00000163104 | SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 | ||
| D6RAY8 F8W9M2 Q9H4L7 | ||||
| 56916 | ||||
26
|
CDK8 | ENSG00000132964 | cyclin dependent kinase 8 | ||
| A0A0D9SEP3 A0A0D9SFZ2 F5H6D4 P49336 | ||||
| 1024 | ||||
23
|
DHX37 | ENSG00000150990 | DEAH-box helicase 37 | ||
| F5H3Y4 Q8IY37 | ||||
| 57647 | ||||
26
|
ESF1 | ENSG00000089048 | ESF1 nucleolar pre-rRNA processing protein homolog | ||
| A0A087WX71 Q9H501 | ||||
| 51575 | ||||
24
|
CDC73 | ENSG00000134371 | cell division cycle 73 | ||
| A0A1B0GUB2 A0A2R8Y640 A0A2R8YHB3 A0A3B3IRP5 A0A3B3ISN2 Q6P1J9 | ||||
| 79577 | ||||
26
|
RAD1 | ENSG00000113456 | RAD1 checkpoint DNA exonuclease | ||
| D6R9A1 O60671 | ||||
| 5810 | ||||
30
|
SF3A3 | ENSG00000183431 | splicing factor 3a subunit 3 | ||
| Q12874 | ||||
| 10946 | ||||
| Spliceosome | ||||
17
|
CPSF4 | ENSG00000160917 | cleavage and polyadenylation specific factor 4 | ||
| B7Z7B0 C9JEV9 C9K0K2 F8WEL7 H7C016 H7C419 O95639 | ||||
| 10898 | ||||
| mRNA surveillance pathway | ||||
22
|
PRPF4 | ENSG00000136875 | pre-mRNA processing factor 4 | ||
| O43172 | ||||
| 9128 | ||||
| Spliceosome | ||||
25
|
PNN | ENSG00000100941 | pinin, desmosome associated protein | ||
| G3V579 G3V5F0 Q9H307 | ||||
| 5411 | ||||
| RNA transport mRNA surveillance pathway | ||||
18
|
CSTF2T | ENSG00000177613 | cleavage stimulation factor subunit 2 tau variant | ||
| Q9H0L4 | ||||
| 23283 | ||||
| mRNA surveillance pathway | ||||
26
|
PPWD1 | ENSG00000113593 | peptidylprolyl isomerase domain and WD repeat containing 1 | ||
| D6R9Q1 D6RA12 D6RB19 D6RD43 D6RDA4 D6RHV0 F5H7P7 H0Y8N5 Q96BP3 | ||||
| 23398 | ||||
25
|
CPSF3 | ENSG00000119203 | cleavage and polyadenylation specific factor 3 | ||
| C9JZH6 G5E9W3 Q9UKF6 | ||||
| 51692 | ||||
| mRNA surveillance pathway | ||||
14
|
NPM1 | ENSG00000181163 | nucleophosmin 1 | ||
| E5RGW4 E5RI98 P06748 | ||||
| 4869 | ||||
23
|
RNMT | ENSG00000101654 | RNA guanine-7 methyltransferase | ||
| K7EP06 K7EPP5 K7ERH6 O43148 | ||||
| 8731 | ||||
| mRNA surveillance pathway | ||||
28
|
CPSF2 | ENSG00000165934 | cleavage and polyadenylation specific factor 2 | ||
| G3V3T7 G3V5T3 H0YJF4 Q9P2I0 | ||||
| 53981 | ||||
| mRNA surveillance pathway | ||||
17
|
CLK2 | ENSG00000176444 | CDC like kinase 2 | ||
| B1AVT0 P49760 | ||||
| 1196 | ||||
27
|
CPSF1 | ENSG00000071894 | cleavage and polyadenylation specific factor 1 | ||
| A0A087WTV4 A0A087X101 E9PIM1 Q10570 | ||||
| 29894 | ||||
| mRNA surveillance pathway | ||||
11
|
CDK4 | ENSG00000135446 | cyclin dependent kinase 4 | ||
| F8VTV8 F8VWX7 F8VXD2 F8VYH9 F8VYY1 F8VZ13 F8VZ51 F8VZZ0 F8W1L8 P11802 Q96BE9 | ||||
| 1019 | ||||
| p53 signaling pathway Tight junction T cell receptor signaling pathway Cell cycle PI3K-Akt signaling pathway | ||||
24
|
CSTF2 | ENSG00000101811 | cleavage stimulation factor subunit 2 | ||
| A0A0A0MT56 E7EWR4 E9PID8 P33240 | ||||
| 1478 | ||||
| mRNA surveillance pathway |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
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jSquid_subnetworks.xml | 309.63 KB | |
H.sapiens_subnetwork.tsv | 67.00 KB |