- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000173933
- RNA binding motif prote…
- SF3B4
- splicing factor 3b subu…
- 0.999
- PPI
- RBM4B
- RNA binding motif prote…
- 0.999
- PPI
- DDX54
- DEAD-box helicase 54
- 0.998
- PPI
- RBM10
- RNA binding motif prote…
- 0.998
- PPI
- HNRNPH3
- heterogeneous nuclear r…
- 0.997
- PPI
- CWC22
- CWC22 spliceosome assoc…
- 0.997
- Complex
- RBM22
- RNA binding motif prote…
- 0.996
- PPI
- RBM26
- RNA binding motif prote…
- 0.996
- Complex
- TBL3
- transducin beta like 3
- 0.996
- PPI
- GLYR1
- glyoxylate reductase 1 …
- 0.994
- PPI
- GTPBP4
- GTP binding protein 4
- 0.994
- PPI
- RSL1D1
- ribosomal L1 domain con…
- 0.992
- PPI
- DDX51
- DEAD-box helicase 51
- 0.990
- PPI
- PUM3
- pumilio RNA binding fam…
- 0.989
- PPI
- BRIX1
- biogenesis of ribosomes…
- 0.983
- PPI
- EIF4A1
- eukaryotic translation …
- 0.982
- PPI
- DDX24
- DEAD-box helicase 24
- 0.980
- PPI
- SNRPC
- small nuclear ribonucle…
- 0.979
- PPI
- SUZ12
- SUZ12 polycomb repressi…
- 0.978
- Complex
- CLTA
- clathrin light chain A
- 0.978
- Complex
- REXO4
- REX4 homolog, 3'-5' exo…
- 0.977
- PPI
- EBNA1BP2
- EBNA1 binding protein 2
- 0.976
- PPI
- RBM28
- RNA binding motif prote…
- 0.975
- PPI
- PAK1IP1
- PAK1 interacting protei…
- 0.975
- PPI
- CLTC
- clathrin heavy chain
- 0.974
- Complex
- WDR36
- WD repeat domain 36
- 0.974
- PPI
- RPF2
- ribosome production fac…
- 0.973
- PPI
- CENPC
- centromere protein C
- 0.973
- PPI
- GNL2
- G protein nucleolar 2
- 0.971
- PPI
- RPL32
- ribosomal protein L32
- 0.969
- PPI
ENSG00000173933
RNA binding motif protein 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
WDR36
WD repeat domain 36
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM22
RNA binding motif protein 22
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EIF4A1
eukaryotic translation initiation factor 4A1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- J3KRC2
- J3KS25
- J3KS93
- J3KSP3
- J3KSZ0
- J3KT04
- J3KT12
- J3KTB5
- J3KTN0
- J3QKZ9
- J3QL43
- J3QL52
- J3QLN6
- J3QQP0
- J3QR64
- J3QRP5
- J3QS69
- P60842
- NCBI
DDX51
DEAD-box helicase 51
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EBNA1BP2
EBNA1 binding protein 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SUZ12
SUZ12 polycomb repressive complex 2 subunit
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
REXO4
REX4 homolog, 3'-5' exonuclease
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PAK1IP1
PAK1 interacting protein 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CLTC
clathrin heavy chain
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
GTPBP4
GTP binding protein 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPC
small nuclear ribonucleoprotein polypeptide C
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PUM3
pumilio RNA binding family member 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM28
RNA binding motif protein 28
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM10
RNA binding motif protein 10
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDX24
DEAD-box helicase 24
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SF3B4
splicing factor 3b subunit 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CENPC
centromere protein C
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPL32
ribosomal protein L32
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RSL1D1
ribosomal L1 domain containing 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM4B
RNA binding motif protein 4B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDX54
DEAD-box helicase 54
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
GNL2
G protein nucleolar 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CWC22
CWC22 spliceosome associated protein homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPF2
ribosome production factor 2 homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BRIX1
biogenesis of ribosomes BRX1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TBL3
transducin beta like 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CLTA
clathrin light chain A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HNRNPH3
heterogeneous nuclear ribonucleoprotein H3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM26
RNA binding motif protein 26
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
28
|
WDR36 | ENSG00000134987 | WD repeat domain 36 | ||
| A0A0A0MTB8 Q8NI36 | ||||
| 134430 | ||||
| Ribosome biogenesis in eukaryotes | ||||
16
|
RBM22 | ENSG00000086589 | RNA binding motif protein 22 | ||
| E5RHA8 E5RJW4 Q9NW64 | ||||
| 55696 | ||||
| Spliceosome | ||||
21
|
EIF4A1 | ENSG00000161960 | eukaryotic translation initiation factor 4A1 | ||
| J3KRC2 J3KS25 J3KS93 J3KSP3 J3KSZ0 J3KT04 J3KT12 J3KTB5 J3KTN0 J3QKZ9 J3QL43 J3QL52 J3QLN6 J3QQP0 J3QR64 J3QRP5 J3QS69 P60842 | ||||
| 1973 | ||||
| RNA transport | ||||
21
|
DDX51 | ENSG00000185163 | DEAD-box helicase 51 | ||
| Q8N8A6 | ||||
| 317781 | ||||
21
|
EBNA1BP2 | ENSG00000117395 | EBNA1 binding protein 2 | ||
| H7C2Q8 Q99848 | ||||
| 10969 | ||||
9
|
SUZ12 | ENSG00000178691 | SUZ12 polycomb repressive complex 2 subunit | ||
| J3QQW9 Q15022 | ||||
| 23512 | ||||
15
|
REXO4 | ENSG00000148300 | REX4 homolog, 3'-5' exonuclease | ||
| A0A0C4DG22 A0A0C4DG31 Q9GZR2 | ||||
| 57109 | ||||
20
|
PAK1IP1 | ENSG00000111845 | PAK1 interacting protein 1 | ||
| Q9NWT1 | ||||
| 55003 | ||||
16
|
CLTC | ENSG00000141367 | clathrin heavy chain | ||
| A0A087WVQ6 J3KRF5 J3KS13 J3KSQ2 J3KTN1 J3QL20 K7EJJ5 Q00610 | ||||
| 1213 | ||||
| Synaptic vesicle cycle | ||||
| Endocytosis Lysosome | ||||
21
|
GTPBP4 | ENSG00000107937 | GTP binding protein 4 | ||
| Q5T3R7 Q9BZE4 | ||||
| 23560 | ||||
| Ribosome biogenesis in eukaryotes | ||||
23
|
SNRPC | ENSG00000124562 | small nuclear ribonucleoprotein polypeptide C | ||
| A0A0A0MRR7 P09234 Q5TAL2 | ||||
| 6631 | ||||
| Spliceosome | ||||
22
|
PUM3 | ENSG00000080608 | pumilio RNA binding family member 3 | ||
| Q15397 S4R3K8 | ||||
| 9933 | ||||
25
|
RBM28 | ENSG00000106344 | RNA binding motif protein 28 | ||
| C9JAA9 C9JE21 H7C5G8 Q9NW13 | ||||
| 55131 | ||||
| Ribosome biogenesis in eukaryotes | ||||
16
|
RBM10 | ENSG00000182872 | RNA binding motif protein 10 | ||
| P98175 | ||||
| 8241 | ||||
22
|
DDX24 | ENSG00000089737 | DEAD-box helicase 24 | ||
| A0A087WXU8 A0A1W2PRR2 F5GYL3 G3V529 Q9GZR7 | ||||
| 57062 | ||||
27
|
SF3B4 | ENSG00000143368 | splicing factor 3b subunit 4 | ||
| Q15427 Q5SZ64 | ||||
| 10262 | ||||
| Spliceosome | ||||
1
|
CENPC | ENSG00000145241 | centromere protein C | ||
| H0Y8J2 H0Y9W1 Q03188 | ||||
| 1060 | ||||
21
|
RPL32 | ENSG00000144713 | ribosomal protein L32 | ||
| D3YTB1 D3YTI8 F8W727 P62910 | ||||
| 6161 | ||||
| Ribosome | ||||
20
|
RSL1D1 | ENSG00000171490 | ribosomal L1 domain containing 1 | ||
| I3L1A3 I3L1Y4 I3L234 I3L2F2 I3L3C4 I3L3U9 I3L4T8 J3KPU7 J3QSV6 O76021 | ||||
| 26156 | ||||
13
|
RBM4B | ENSG00000173914 | RNA binding motif protein 4B | ||
| E9PLB0 E9PM61 H0YDG8 Q9BQ04 U3KQD5 | ||||
| 83759 | ||||
23
|
DDX54 | ENSG00000123064 | DEAD-box helicase 54 | ||
| F8VRX4 H0YHH7 H0YHZ9 Q8TDD1 | ||||
| 79039 | ||||
21
|
GNL2 | ENSG00000134697 | G protein nucleolar 2 | ||
| H0YG10 Q13823 | ||||
| 29889 | ||||
| Ribosome biogenesis in eukaryotes | ||||
23
|
CWC22 | ENSG00000163510 | CWC22 spliceosome associated protein homolog | ||
| B7WP74 Q9HCG8 | ||||
| 57703 | ||||
23
|
RPF2 | ENSG00000197498 | ribosome production factor 2 homolog | ||
| Q5VXM9 Q5VXN0 Q9H7B2 U3KQN5 | ||||
| 84154 | ||||
21
|
BRIX1 | ENSG00000113460 | biogenesis of ribosomes BRX1 | ||
| Q8TDN6 | ||||
| 55299 | ||||
27
|
TBL3 | ENSG00000183751 | transducin beta like 3 | ||
| A0A087WYP7 H3BN88 J3KNP2 Q12788 | ||||
| 10607 | ||||
| Ribosome biogenesis in eukaryotes | ||||
8
|
CLTA | ENSG00000122705 | clathrin light chain A | ||
| C9J8P9 F8WF69 P09496 S4R3F6 | ||||
| 1211 | ||||
| Synaptic vesicle cycle | ||||
| Endocytosis Lysosome | ||||
12
|
HNRNPH3 | ENSG00000096746 | heterogeneous nuclear ribonucleoprotein H3 | ||
| P31942 | ||||
| 3189 | ||||
14
|
RBM26 | ENSG00000139746 | RNA binding motif protein 26 | ||
| A0A087X0H9 E2PSN0 Q5T8P6 | ||||
| 64062 | ||||
6
|
GLYR1 | ENSG00000140632 | glyoxylate reductase 1 homolog | ||
| K7EK70 K7ELL0 K7EMM8 K7EPU6 K7EQB2 Q49A26 | ||||
| 84656 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
- Add to current query
jSquid_subnetworks.xml | 297.36 KB | |
H.sapiens_subnetwork.tsv | 54.70 KB |