Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000172301
- coordinator of PRMT5 an…
- WDR77
- WD repeat domain 77
- 0.970
- PPI
- PRMT5
- protein arginine methyl…
- 0.949
- PPI
- FBL
- fibrillarin
- 0.947
- PPI
- SNRPB
- small nuclear ribonucle…
- 0.937
- Complex
- RBFOX2
- RNA binding fox-1 homol…
- 0.916
- PPI
- GAR1
- GAR1 ribonucleoprotein
- 0.908
- PPI
- CLNS1A
- chloride nucleotide-sen…
- 0.907
- Complex
- RPS2
- ribosomal protein S2
- 0.832
- PPI
- USP39
- ubiquitin specific pept…
- 0.731
- PPI
- RUNX1
- RUNX family transcripti…
- 0.664
- PPI
- SMURF1
- SMAD specific E3 ubiqui…
- 0.656
- PPI
- FOXRED1
- FAD dependent oxidoredu…
- 0.545
- PPI
- VBP1
- VHL binding protein 1
- 0.511
- PPI
- LSM6
- LSM6 homolog, U6 small …
- 0.499
- PPI
- AURKA
- aurora kinase A
- 0.438
- PPI
- FARP2
- FERM, ARH/RhoGEF and pl…
- 0.436
- PPI
- PTMA
- prothymosin alpha
- 0.418
- Metabolic
- RIOK1
- RIO kinase 1
- 0.400
- PPI
Subnetwork gene interactions
ENSG00000172301
coordinator of PRMT5 and differentiation stimulator
FunCoup
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- Ensembl
- UniProt
- NCBI
USP39
ubiquitin specific peptidase 39
FunCoup
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- Ensembl
- UniProt
- NCBI
PRMT5
protein arginine methyltransferase 5
FunCoup
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- Ensembl
- UniProt
- C9JSX3
- G3V2F5
- G3V2L6
- G3V2X6
- G3V3A3
- G3V507
- G3V580
- G3V5L5
- G3V5T6
- H0YJ77
- H0YJD3
- H0YJX6
- H0YJY6
- H7BZ44
- O14744
- NCBI
CLNS1A
chloride nucleotide-sensitive channel 1A
FunCoup
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- Ensembl
- UniProt
- NCBI
RUNX1
RUNX family transcription factor 1
FunCoup
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- Ensembl
- UniProt
- NCBI
PTMA
prothymosin alpha
FunCoup
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- Ensembl
- UniProt
- NCBI
RPS2
ribosomal protein S2
FunCoup
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- Ensembl
- UniProt
- NCBI
SNRPB
small nuclear ribonucleoprotein polypeptides B and B1
FunCoup
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- Ensembl
- UniProt
- NCBI
VBP1
VHL binding protein 1
FunCoup
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- Ensembl
- UniProt
- NCBI
FARP2
FERM, ARH/RhoGEF and pleckstrin domain protein 2
FunCoup
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- Ensembl
- UniProt
- NCBI
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
FunCoup
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- Ensembl
- UniProt
- NCBI
RIOK1
RIO kinase 1
FunCoup
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- Ensembl
- UniProt
- NCBI
SMURF1
SMAD specific E3 ubiquitin protein ligase 1
FunCoup
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- Ensembl
- UniProt
- NCBI
AURKA
aurora kinase A
FunCoup
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- Ensembl
- UniProt
- NCBI
GAR1
GAR1 ribonucleoprotein
FunCoup
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- Ensembl
- UniProt
- NCBI
FBL
fibrillarin
FunCoup
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- Ensembl
- UniProt
- NCBI
WDR77
WD repeat domain 77
FunCoup
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- Ensembl
- UniProt
- NCBI
RBFOX2
RNA binding fox-1 homolog 2
FunCoup
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- Ensembl
- UniProt
- NCBI
FOXRED1
FAD dependent oxidoreductase domain containing 1
FunCoup
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
Query genes
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
11
|
USP39 | ENSG00000168883 | ubiquitin specific peptidase 39 | ||
| A0A087WW31 A0A087X1B2 B9A018 C9J0X5 C9JIU2 F8WC91 Q53GS9 | ||||
| 10713 | ||||
| Spliceosome | ||||
15
|
PRMT5 | ENSG00000100462 | protein arginine methyltransferase 5 | ||
| C9JSX3 G3V2F5 G3V2L6 G3V2X6 G3V3A3 G3V507 G3V580 G3V5L5 G3V5T6 H0YJ77 H0YJD3 H0YJX6 H0YJY6 H7BZ44 O14744 | ||||
| 10419 | ||||
| RNA transport | ||||
13
|
CLNS1A | ENSG00000074201 | chloride nucleotide-sensitive channel 1A | ||
| E9PJF4 E9PMI6 E9PQ83 H0YEN9 J3KN38 P54105 U3KPU0 | ||||
| 1207 | ||||
| RNA transport | ||||
3
|
RUNX1 | ENSG00000159216 | RUNX family transcription factor 1 | ||
| A0A0C4DG58 A8MZI9 C9JWM1 H9KVB1 Q01196 V9GYT3 V9GYT5 | ||||
| 861 | ||||
| Tight junction | ||||
3
|
PTMA | ENSG00000187514 | prothymosin alpha | ||
| B8ZZA1 B8ZZQ6 B8ZZW7 F8WCE8 H7C031 H7C2N1 P06454 | ||||
| 5757 | ||||
11
|
RPS2 | ENSG00000140988 | ribosomal protein S2 | ||
| E9PM36 E9PMM9 E9PPT0 E9PQD7 H0YE27 H0YEN5 H3BNG3 I3L404 P15880 | ||||
| 6187 | ||||
| Ribosome | ||||
7
|
SNRPB | ENSG00000125835 | small nuclear ribonucleoprotein polypeptides B and B1 | ||
| P14678 S4R3P3 | ||||
| 6628 | ||||
| Spliceosome | ||||
8
|
VBP1 | ENSG00000155959 | VHL binding protein 1 | ||
| P61758 | ||||
| 7411 | ||||
4
|
FARP2 | ENSG00000006607 | FERM, ARH/RhoGEF and pleckstrin domain protein 2 | ||
| C9JVQ5 C9JWM9 H7C210 H7C3E4 H7C3M7 H7C447 O94887 | ||||
| 9855 | ||||
| Rap1 signaling pathway Adherens junction | ||||
10
|
LSM6 | ENSG00000164167 | LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| P62312 | ||||
| 11157 | ||||
| RNA degradation Spliceosome | ||||
11
|
RIOK1 | ENSG00000124784 | RIO kinase 1 | ||
| E9PFQ8 Q9BRS2 | ||||
| 83732 | ||||
| Ribosome biogenesis in eukaryotes | ||||
2
|
SMURF1 | ENSG00000198742 | SMAD specific E3 ubiquitin protein ligase 1 | ||
| Q9HCE7 | ||||
| 57154 | ||||
| Hedgehog signaling pathway TGF-beta signaling pathway | ||||
| Endocytosis Ubiquitin mediated proteolysis | ||||
6
|
AURKA | ENSG00000087586 | aurora kinase A | ||
| A3KFJ0 A3KFJ1 A3KFJ2 O14965 Q5QPD1 Q5QPD2 Q5QPD4 | ||||
| 6790 | ||||
| Oocyte meiosis Progesterone-mediated oocyte maturation | ||||
11
|
GAR1 | ENSG00000109534 | GAR1 ribonucleoprotein | ||
| Q9NY12 | ||||
| 54433 | ||||
| Ribosome biogenesis in eukaryotes | ||||
4
|
FBL | ENSG00000105202 | fibrillarin | ||
| M0QXC9 M0QXL5 M0R0P1 M0R1H0 M0R299 M0R2B0 M0R2Q4 M0R2U2 P22087 | ||||
| 2091 | ||||
| Ribosome biogenesis in eukaryotes | ||||
6
|
WDR77 | ENSG00000116455 | WD repeat domain 77 | ||
| H0Y711 Q9BQA1 | ||||
| 79084 | ||||
2
|
RBFOX2 | ENSG00000100320 | RNA binding fox-1 homolog 2 | ||
| B0QYV1 B0QYY4 B0QYY6 B0QYY7 O43251 S4R3K7 S4R469 | ||||
| 23543 | ||||
1
|
FOXRED1 | ENSG00000110074 | FAD dependent oxidoreductase domain containing 1 | ||
| E9PNK9 E9PP78 Q96CU9 | ||||
| 55572 |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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jSquid_subnetworks.xml | 172.02 KB | |
H.sapiens_subnetwork.tsv | 12.35 KB |