Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000172171
- transcription elongatio…
- RPL34
- ribosomal protein L34
- 0.942
- Complex
- TIAL1
- TIA1 cytotoxic granule …
- 0.941
- Complex
- ABCF1
- ATP binding cassette su…
- 0.939
- Complex
- NEK4
- NIMA related kinase 4
- 0.894
- Complex
- ZSCAN21
- zinc finger and SCAN do…
- 0.826
- Complex
- NSUN4
- NOP2/Sun RNA methyltran…
- 0.756
- Complex
- RCC1L
- RCC1 like
- 0.752
- PPI
- KBTBD7
- kelch repeat and BTB do…
- 0.738
- PPI
- SPCS2
- signal peptidase comple…
- 0.630
- PPI
- RPP25L
- ribonuclease P/MRP subu…
- 0.616
- PPI
- CUL3
- cullin 3
- 0.590
- PPI
- RAI14
- retinoic acid induced 14
- 0.584
- Complex
- CLUH
- clustered mitochondria …
- 0.582
- PPI
- RPGR
- retinitis pigmentosa GT…
- 0.522
- Complex
- SSB
- small RNA binding exonu…
- 0.504
- Metabolic
- MPRIP
- myosin phosphatase Rho …
- 0.496
- Complex
- ZUP1
- zinc finger containing …
- 0.417
- PPI
- MRPL17
- mitochondrial ribosomal…
- 0.414
- Metabolic
Subnetwork gene interactions
ENSG00000172171
transcription elongation factor, mitochondrial
FunCoup
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- Ensembl
- UniProt
- NCBI
SPCS2
signal peptidase complex subunit 2
FunCoup
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- Ensembl
- UniProt
- NCBI
CUL3
cullin 3
FunCoup
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- Ensembl
- UniProt
- NCBI
KBTBD7
kelch repeat and BTB domain containing 7
FunCoup
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- Ensembl
- UniProt
- NCBI
TIAL1
TIA1 cytotoxic granule associated RNA binding protein like 1
FunCoup
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- Ensembl
- UniProt
- NCBI
RPL34
ribosomal protein L34
FunCoup
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- Ensembl
- UniProt
- NCBI
SSB
small RNA binding exonuclease protection factor La
FunCoup
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- Ensembl
- UniProt
- NCBI
MPRIP
myosin phosphatase Rho interacting protein
FunCoup
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- Ensembl
- UniProt
- NCBI
ABCF1
ATP binding cassette subfamily F member 1
FunCoup
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- Ensembl
- UniProt
- NCBI
RPGR
retinitis pigmentosa GTPase regulator
FunCoup
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- Ensembl
- UniProt
- NCBI
RAI14
retinoic acid induced 14
FunCoup
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- Ensembl
- UniProt
- NCBI
RPP25L
ribonuclease P/MRP subunit p25 like
FunCoup
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- Ensembl
- UniProt
- NCBI
ZSCAN21
zinc finger and SCAN domain containing 21
FunCoup
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- Ensembl
- UniProt
- NCBI
NEK4
NIMA related kinase 4
FunCoup
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- Ensembl
- UniProt
- NCBI
MRPL17
mitochondrial ribosomal protein L17
FunCoup
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- Ensembl
- UniProt
- NCBI
CLUH
clustered mitochondria homolog
FunCoup
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- Ensembl
- UniProt
- NCBI
NSUN4
NOP2/Sun RNA methyltransferase 4
FunCoup
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- Add to current query
- Ensembl
- UniProt
- NCBI
ZUP1
zinc finger containing ubiquitin peptidase 1
FunCoup
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- Ensembl
- UniProt
- NCBI
RCC1L
RCC1 like
FunCoup
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
Query genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
18
|
ENSG00000172171 | ENSG00000172171 | transcription elongation factor, mitochondrial | ||
| J3KTG7 Q96QE5 | ||||
| 79736 |
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
4
|
SPCS2 | ENSG00000118363 | signal peptidase complex subunit 2 | ||
| A0A087WUC6 E9PI68 E9PL01 E9PRB9 H0YE04 Q15005 | ||||
| 9789 | ||||
| Protein export | ||||
5
|
CUL3 | ENSG00000036257 | cullin 3 | ||
| A0A087WTG3 A0A087X1R9 H7C1J0 H7C1L6 H7C399 Q13618 | ||||
| 8452 | ||||
| Hedgehog signaling pathway | ||||
| Ubiquitin mediated proteolysis | ||||
5
|
KBTBD7 | ENSG00000120696 | kelch repeat and BTB domain containing 7 | ||
| Q8WVZ9 | ||||
| 84078 | ||||
5
|
TIAL1 | ENSG00000151923 | TIA1 cytotoxic granule associated RNA binding protein like 1 | ||
| A0A087WX93 A6NKZ9 E7ETC0 E7ETJ9 Q01085 | ||||
| 7073 | ||||
11
|
RPL34 | ENSG00000109475 | ribosomal protein L34 | ||
| P49207 | ||||
| 6164 | ||||
| Ribosome | ||||
8
|
SSB | ENSG00000138385 | small RNA binding exonuclease protection factor La | ||
| E7ERC4 E9PFL9 E9PGX9 P05455 | ||||
| 6741 | ||||
7
|
MPRIP | ENSG00000133030 | myosin phosphatase Rho interacting protein | ||
| A0A1W2PPU9 A0A494BZV2 A8MZF8 H0Y2S9 H0Y7E2 H7C3G6 J3KSK7 J3KSW8 J3QL44 J3QRL2 K7EJ14 K7EL39 Q6WCQ1 | ||||
| 23164 | ||||
11
|
ABCF1 | ENSG00000204574 | ATP binding cassette subfamily F member 1 | ||
| F5GYK6 H0YGW7 Q5STZ8 Q8NE71 | ||||
| 23 | ||||
7
|
RPGR | ENSG00000156313 | retinitis pigmentosa GTPase regulator | ||
| A0A2R8Y414 A0A2R8Y4C9 A0A2R8Y838 A0A2R8YDN2 A0A2R8YF02 A0A2R8YFT6 A0A2R8YGY6 H7C4H4 H7C4L1 Q92834 | ||||
| 6103 | ||||
7
|
RAI14 | ENSG00000039560 | retinoic acid induced 14 | ||
| D6R9G4 D6R9G6 D6RB25 D6RB27 D6RBW6 D6RBY4 D6RDL2 D6RE17 D6REL2 D6RF74 Q9P0K7 | ||||
| 26064 | ||||
10
|
RPP25L | ENSG00000164967 | ribonuclease P/MRP subunit p25 like | ||
| Q8N5L8 | ||||
| 138716 | ||||
| Ribosome biogenesis in eukaryotes RNA transport | ||||
5
|
ZSCAN21 | ENSG00000166529 | zinc finger and SCAN domain containing 21 | ||
| C9JHD9 G3V0F4 G3V1M0 Q9Y5A6 | ||||
| 7589 | ||||
7
|
NEK4 | ENSG00000114904 | NIMA related kinase 4 | ||
| E7EX48 F8WAX1 H7C5M0 P51957 | ||||
| 6787 | ||||
8
|
MRPL17 | ENSG00000158042 | mitochondrial ribosomal protein L17 | ||
| E9PKV2 Q9NRX2 | ||||
| 63875 | ||||
| Ribosome | ||||
9
|
CLUH | ENSG00000132361 | clustered mitochondria homolog | ||
| A0A494C0R8 I3L2B0 I3L318 I3L350 I3L3A3 I3L4B5 K7EIG1 O75153 | ||||
| 23277 | ||||
6
|
NSUN4 | ENSG00000117481 | NOP2/Sun RNA methyltransferase 4 | ||
| A0A087WT36 A0A087WUV3 A0A087X0V6 M0R1K5 Q6ZRQ1 Q96CB9 | ||||
| 387338 | ||||
1
|
ZUP1 | ENSG00000153975 | zinc finger containing ubiquitin peptidase 1 | ||
| Q96AP4 X6R6X3 | ||||
| 221302 | ||||
2
|
RCC1L | ENSG00000274523 | RCC1 like | ||
| A0A087WT38 Q96I51 | ||||
| 81554 |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
Copied subnetwork genes to clipboard
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jSquid_subnetworks.xml | 148.24 KB | |
H.sapiens_subnetwork.tsv | 10.67 KB |