- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000170935
- nuclear cap binding pro…
- SNRPD2
- small nuclear ribonucle…
- 0.923
- Complex
- SNRPE
- small nuclear ribonucle…
- 0.828
- PPI
- KPNB1
- karyopherin subunit bet…
- 0.729
- PPI
- PRPF39
- pre-mRNA processing fac…
- 0.708
- PPI
- PRPF19
- pre-mRNA processing fac…
- 0.706
- PPI
- LSM6
- LSM6 homolog, U6 small …
- 0.686
- Metabolic
- ELAVL3
- ELAV like RNA binding p…
- 0.657
- PPI
- DIS3
- DIS3 homolog, exosome e…
- 0.653
- Metabolic
- SFPQ
- splicing factor proline…
- 0.637
- PPI
- CDC40
- cell division cycle 40
- 0.629
- PPI
- PSPC1
- paraspeckle component 1
- 0.620
- PPI
- NONO
- non-POU domain containi…
- 0.620
- PPI
- SNRPD1
- small nuclear ribonucle…
- 0.616
- PPI
- POLR2E
- RNA polymerase II subun…
- 0.564
- Metabolic
- POLR2C
- RNA polymerase II subun…
- 0.560
- PPI
- BTAF1
- B-TFIID TATA-box bindin…
- 0.548
- PPI
- SNRPD3
- small nuclear ribonucle…
- 0.546
- PPI
- DHX15
- DEAH-box helicase 15
- 0.497
- Complex
- NXF1
- nuclear RNA export fact…
- 0.495
- Metabolic
- LSM1
- LSM1 homolog, mRNA degr…
- 0.492
- PPI
- NXF2B
- nuclear RNA export fact…
- 0.462
- PPI
- NXF2
- nuclear RNA export fact…
- 0.462
- PPI
- CRNKL1
- crooked neck pre-mRNA s…
- 0.460
- PPI
- CELF3
- CUGBP Elav-like family …
- 0.458
- PPI
- SF3B3
- splicing factor 3b subu…
- 0.453
- PPI
- EXOSC2
- exosome component 2
- 0.432
- Complex
- SCAF8
- SR-related CTD associat…
- 0.422
- PPI
- SCAF4
- SR-related CTD associat…
- 0.422
- PPI
- LUC7L2
- LUC7 like 2, pre-mRNA s…
- 0.418
- PPI
ENSG00000170935
nuclear cap binding protein subunit 2 like
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM1
LSM1 homolog, mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPD3
small nuclear ribonucleoprotein D3 polypeptide
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SFPQ
splicing factor proline and glutamine rich
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DHX15
DEAH-box helicase 15
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NXF1
nuclear RNA export factor 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF39
pre-mRNA processing factor 39
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CRNKL1
crooked neck pre-mRNA splicing factor 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPE
small nuclear ribonucleoprotein polypeptide E
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF19
pre-mRNA processing factor 19
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SCAF4
SR-related CTD associated factor 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CELF3
CUGBP Elav-like family member 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PSPC1
paraspeckle component 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
KPNB1
karyopherin subunit beta 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SF3B3
splicing factor 3b subunit 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPD1
small nuclear ribonucleoprotein D1 polypeptide
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LUC7L2
LUC7 like 2, pre-mRNA splicing factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR2E
RNA polymerase II subunit E
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EXOSC2
exosome component 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR2C
RNA polymerase II subunit C
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CDC40
cell division cycle 40
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPD2
small nuclear ribonucleoprotein D2 polypeptide
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SCAF8
SR-related CTD associated factor 8
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DIS3
DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NONO
non-POU domain containing octamer binding
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NXF2B
nuclear RNA export factor 2B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BTAF1
B-TFIID TATA-box binding protein associated factor 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NXF2
nuclear RNA export factor 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ELAVL3
ELAV like RNA binding protein 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
29
|
ENSG00000170935 | ENSG00000170935 | nuclear cap binding protein subunit 2 like | ||
| A6PVI3 | ||||
| 392517 |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
18
|
LSM1 | ENSG00000175324 | LSM1 homolog, mRNA degradation associated | ||
| E5RH18 E5RJ47 O15116 | ||||
| 27257 | ||||
| RNA degradation | ||||
23
|
SNRPD3 | ENSG00000100028 | small nuclear ribonucleoprotein D3 polypeptide | ||
| P62318 | ||||
| 6634 | ||||
| Spliceosome | ||||
20
|
SFPQ | ENSG00000116560 | splicing factor proline and glutamine rich | ||
| H0Y9K7 H0Y9U2 P23246 | ||||
| 6421 | ||||
25
|
DHX15 | ENSG00000109606 | DEAH-box helicase 15 | ||
| O43143 | ||||
| 1665 | ||||
| Spliceosome | ||||
13
|
NXF1 | ENSG00000162231 | nuclear RNA export factor 1 | ||
| B4E227 E9PIN3 E9PLA7 E9PMV7 E9PQA4 H0YDU0 Q9UBU9 | ||||
| 10482 | ||||
| Ribosome biogenesis in eukaryotes RNA transport mRNA surveillance pathway | ||||
19
|
PRPF39 | ENSG00000185246 | pre-mRNA processing factor 39 | ||
| F8WB90 G3V5M7 H0YJR1 H0YJY9 Q86UA1 | ||||
| 55015 | ||||
21
|
CRNKL1 | ENSG00000101343 | crooked neck pre-mRNA splicing factor 1 | ||
| A0A0C4DGD7 Q5JY65 Q9BZJ0 | ||||
| 51340 | ||||
| Spliceosome | ||||
20
|
SNRPE | ENSG00000182004 | small nuclear ribonucleoprotein polypeptide E | ||
| A6NHK2 P62304 | ||||
| 6635 | ||||
| Spliceosome | ||||
23
|
PRPF19 | ENSG00000110107 | pre-mRNA processing factor 19 | ||
| F5GY56 F5H2I0 H0YGF3 H0YGZ5 Q9UMS4 | ||||
| 27339 | ||||
| Spliceosome Ubiquitin mediated proteolysis | ||||
19
|
SCAF4 | ENSG00000156304 | SR-related CTD associated factor 4 | ||
| O95104 | ||||
| 57466 | ||||
1
|
CELF3 | ENSG00000159409 | CUGBP Elav-like family member 3 | ||
| H0Y623 Q5SZQ8 | ||||
| 11189 | ||||
21
|
PSPC1 | ENSG00000121390 | paraspeckle component 1 | ||
| A0A0U1RQF9 Q8WXF1 X6RDA4 | ||||
| 55269 | ||||
25
|
KPNB1 | ENSG00000108424 | karyopherin subunit beta 1 | ||
| J3KS06 J3KTM9 J3QKQ5 J3QR48 J3QRG4 Q14974 | ||||
| 3837 | ||||
| RNA transport | ||||
23
|
SF3B3 | ENSG00000189091 | splicing factor 3b subunit 3 | ||
| H3BMB0 I3L4G7 J3QKV4 J3QL37 J3QRB2 Q15393 | ||||
| 23450 | ||||
| Spliceosome | ||||
24
|
SNRPD1 | ENSG00000167088 | small nuclear ribonucleoprotein D1 polypeptide | ||
| J3QLI9 J3QLR7 P62314 | ||||
| 6632 | ||||
| Spliceosome | ||||
21
|
LUC7L2 | ENSG00000146963 | LUC7 like 2, pre-mRNA splicing factor | ||
| F8WEU3 Q9Y383 V9GZ75 | ||||
| 51631 | ||||
21
|
POLR2E | ENSG00000099817 | RNA polymerase II subunit E | ||
| A0A087WVN5 A0A087WVZ9 A0A087WWX0 A0A0A0MQR7 K7EJ87 K7EQN2 P19388 | ||||
| 5434 | ||||
| Cytosolic DNA-sensing pathway | ||||
| RNA polymerase | ||||
19
|
EXOSC2 | ENSG00000130713 | exosome component 2 | ||
| A3KFL1 A3KFL2 A3KFL5 Q13868 | ||||
| 23404 | ||||
| RNA degradation | ||||
22
|
POLR2C | ENSG00000102978 | RNA polymerase II subunit C | ||
| H3BRR2 P19387 | ||||
| 5432 | ||||
| RNA polymerase | ||||
20
|
CDC40 | ENSG00000168438 | cell division cycle 40 | ||
| O60508 Q5SRN1 | ||||
| 51362 | ||||
| Spliceosome | ||||
21
|
LSM6 | ENSG00000164167 | LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| P62312 | ||||
| 11157 | ||||
| RNA degradation Spliceosome | ||||
23
|
SNRPD2 | ENSG00000125743 | small nuclear ribonucleoprotein D2 polypeptide | ||
| K7EJB5 K7ERG4 P62316 | ||||
| 6633 | ||||
| Spliceosome | ||||
18
|
SCAF8 | ENSG00000213079 | SR-related CTD associated factor 8 | ||
| A0A0A0MT33 Q9UPN6 | ||||
| 22828 | ||||
17
|
DIS3 | ENSG00000083520 | DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease | ||
| F2Z2C0 G3V1J5 Q9Y2L1 | ||||
| 22894 | ||||
| RNA degradation | ||||
21
|
NONO | ENSG00000147140 | non-POU domain containing octamer binding | ||
| C9IZL7 C9J4X2 C9JJ13 C9JYS8 H7C367 Q15233 | ||||
| 4841 | ||||
3
|
NXF2B | ENSG00000269437 | nuclear RNA export factor 2B | ||
| Q9GZY0 | ||||
| 56001 728343 | ||||
| Ribosome biogenesis in eukaryotes RNA transport mRNA surveillance pathway | ||||
8
|
BTAF1 | ENSG00000095564 | B-TFIID TATA-box binding protein associated factor 1 | ||
| A0A0A0MTH9 O14981 | ||||
| 9044 | ||||
3
|
NXF2 | ENSG00000269405 | nuclear RNA export factor 2 | ||
| Q9GZY0 | ||||
| 56001 728343 | ||||
| Ribosome biogenesis in eukaryotes RNA transport mRNA surveillance pathway | ||||
1
|
ELAVL3 | ENSG00000196361 | ELAV like RNA binding protein 3 | ||
| K7EPB5 Q14576 | ||||
| 1995 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
- Add to current query
jSquid_subnetworks.xml | 289.09 KB | |
H.sapiens_subnetwork.tsv | 50.45 KB |