- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000170892
- tRNA splicing endonucle…
- TSEN2
- tRNA splicing endonucle…
- 1.000
- PPI
- TSEN54
- tRNA splicing endonucle…
- 0.999
- PPI
- SSB
- small RNA binding exonu…
- 0.987
- Complex
- CLP1
- cleavage factor polyrib…
- 0.978
- PPI
- TSEN15
- tRNA splicing endonucle…
- 0.974
- PPI
- CDKN2AIP
- CDKN2A interacting prot…
- 0.962
- Complex
- LARP7
- La ribonucleoprotein 7,…
- 0.961
- PPI
- PCF11
- PCF11 cleavage and poly…
- 0.943
- Complex
- POLR2A
- RNA polymerase II subun…
- 0.939
- Complex
- PCNA
- proliferating cell nucl…
- 0.920
- Metabolic
- MSH6
- mutS homolog 6
- 0.887
- Metabolic
- RAD21
- RAD21 cohesin complex c…
- 0.794
- Complex
- DKC1
- dyskerin pseudouridine …
- 0.772
- Metabolic
- FBXW11
- F-box and WD repeat dom…
- 0.766
- PPI
- POLA1
- DNA polymerase alpha 1,…
- 0.753
- Metabolic
- SSRP1
- structure specific reco…
- 0.716
- Metabolic
- NOP2
- NOP2 nucleolar protein
- 0.696
- Metabolic
- STUB1
- STIP1 homology and U-bo…
- 0.655
- Metabolic
- POLR2H
- RNA polymerase II subun…
- 0.648
- Metabolic
- ELP3
- elongator acetyltransfe…
- 0.645
- Metabolic
- RBBP5
- RB binding protein 5, h…
- 0.639
- Metabolic
- DDX47
- DEAD-box helicase 47
- 0.620
- Metabolic
- EDF1
- endothelial differentia…
- 0.617
- Metabolic
- POLR2E
- RNA polymerase II subun…
- 0.613
- Metabolic
- NOP10
- NOP10 ribonucleoprotein
- 0.603
- Metabolic
- RRP36
- ribosomal RNA processin…
- 0.603
- Metabolic
- RCC1
- regulator of chromosome…
- 0.600
- Metabolic
- EXOSC9
- exosome component 9
- 0.599
- Complex
- PSMA4
- proteasome 20S subunit …
- 0.598
- Metabolic
- POP7
- POP7 homolog, ribonucle…
- 0.594
- Metabolic
ENSG00000170892
tRNA splicing endonuclease subunit 34
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- Ensembl
- UniProt
- NCBI
CLP1
cleavage factor polyribonucleotide kinase subunit 1
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- Ensembl
- UniProt
- NCBI
LARP7
La ribonucleoprotein 7, transcriptional regulator
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- Ensembl
- UniProt
- NCBI
PSMA4
proteasome 20S subunit alpha 4
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- Ensembl
- UniProt
- NCBI
ELP3
elongator acetyltransferase complex subunit 3
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- Ensembl
- UniProt
- NCBI
SSRP1
structure specific recognition protein 1
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- Ensembl
- UniProt
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POLR2H
RNA polymerase II subunit H
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- Ensembl
- UniProt
- NCBI
TSEN2
tRNA splicing endonuclease subunit 2
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- Ensembl
- UniProt
- NCBI
SSB
small RNA binding exonuclease protection factor La
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- Ensembl
- UniProt
- NCBI
DKC1
dyskerin pseudouridine synthase 1
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- Ensembl
- UniProt
- NCBI
RCC1
regulator of chromosome condensation 1
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- Ensembl
- UniProt
- NCBI
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit
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- Ensembl
- UniProt
- NCBI
POLR2E
RNA polymerase II subunit E
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- Ensembl
- UniProt
- NCBI
POLR2A
RNA polymerase II subunit A
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- Ensembl
- UniProt
- NCBI
STUB1
STIP1 homology and U-box containing protein 1
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- Ensembl
- UniProt
- NCBI
EDF1
endothelial differentiation related factor 1
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- Ensembl
- UniProt
- NCBI
RRP36
ribosomal RNA processing 36
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- Ensembl
- UniProt
- NCBI
TSEN54
tRNA splicing endonuclease subunit 54
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- Ensembl
- UniProt
- NCBI
DDX47
DEAD-box helicase 47
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- Ensembl
- UniProt
- NCBI
NOP2
NOP2 nucleolar protein
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- Ensembl
- UniProt
- NCBI
PCNA
proliferating cell nuclear antigen
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- Ensembl
- UniProt
- NCBI
MSH6
mutS homolog 6
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- Ensembl
- UniProt
- NCBI
POP7
POP7 homolog, ribonuclease P/MRP subunit
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- Ensembl
- UniProt
- NCBI
NOP10
NOP10 ribonucleoprotein
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- Ensembl
- UniProt
- NCBI
RAD21
RAD21 cohesin complex component
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- Ensembl
- UniProt
- NCBI
POLA1
DNA polymerase alpha 1, catalytic subunit
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- Ensembl
- UniProt
- NCBI
EXOSC9
exosome component 9
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- Ensembl
- UniProt
- NCBI
TSEN15
tRNA splicing endonuclease subunit 15
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- Ensembl
- UniProt
- A0A2R8Y5L0
- A0A2R8Y5Q6
- A0A2R8Y5W5
- A0A2R8Y6A4
- A0A2R8Y6B3
- A0A2R8Y6M5
- A0A2R8Y7T8
- A0A2R8YDU8
- A0A2R8YEM0
- A0A2R8YG40
- A0A2R8YHG0
- A0A2U3TZM3
- E9PPN1
- F2Z3M0
- H0YCV5
- Q8WW01
- NCBI
PCF11
PCF11 cleavage and polyadenylation factor subunit
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- Ensembl
- UniProt
- NCBI
CDKN2AIP
CDKN2A interacting protein
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- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000170892 | ENSG00000170892 | tRNA splicing endonuclease subunit 34 | ||
| A0A590UJ73 A0A590UJW4 A0A590UK37 A9C4B9 B0V3J0 E7EQB3 Q9BSV6 | ||||
| 79042 |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
8
|
CLP1 | ENSG00000172409 | cleavage factor polyribonucleotide kinase subunit 1 | ||
| E9PJM4 E9PKV5 E9PL17 Q92989 | ||||
| 10978 | ||||
| mRNA surveillance pathway | ||||
16
|
LARP7 | ENSG00000174720 | La ribonucleoprotein 7, transcriptional regulator | ||
| D6R9Z6 D6RAF3 D6RBH8 D6RF22 D6RF49 D6RFF0 H0YA82 Q4G0J3 | ||||
| 51574 | ||||
22
|
PSMA4 | ENSG00000041357 | proteasome 20S subunit alpha 4 | ||
| H0YKS0 H0YKT8 H0YL69 H0YLC2 H0YLS6 H0YMA1 H0YMI6 H0YMV3 H0YMZ1 H0YN18 P25789 | ||||
| 5685 | ||||
| Proteasome | ||||
21
|
ELP3 | ENSG00000134014 | elongator acetyltransferase complex subunit 3 | ||
| B4DKA4 E5RG26 E5RHR2 E5RHY2 E5RIC0 E5RIU1 E5RIZ7 H0YAP7 H0YC54 Q9H9T3 | ||||
| 55140 | ||||
22
|
SSRP1 | ENSG00000149136 | structure specific recognition protein 1 | ||
| A0A0U1RRK2 E9PMD4 E9PPZ7 Q08945 | ||||
| 6749 | ||||
24
|
POLR2H | ENSG00000163882 | RNA polymerase II subunit H | ||
| C9JJJ9 C9JLU1 P52434 | ||||
| 5437 | ||||
| Cytosolic DNA-sensing pathway | ||||
| RNA polymerase | ||||
13
|
TSEN2 | ENSG00000154743 | tRNA splicing endonuclease subunit 2 | ||
| C9J7Z4 H7C2Z3 H7C301 Q8NCE0 | ||||
| 80746 | ||||
26
|
SSB | ENSG00000138385 | small RNA binding exonuclease protection factor La | ||
| E7ERC4 E9PFL9 E9PGX9 P05455 | ||||
| 6741 | ||||
25
|
DKC1 | ENSG00000130826 | dyskerin pseudouridine synthase 1 | ||
| C9IYT0 H7BZF2 H7C0M1 H7C2Q2 H7C2Q9 O60832 | ||||
| 1736 | ||||
| Ribosome biogenesis in eukaryotes | ||||
19
|
RCC1 | ENSG00000180198 | regulator of chromosome condensation 1 | ||
| C9J3R0 C9JMJ4 C9JQZ4 C9JRH2 C9JW69 M0R1Q8 P18754 | ||||
| 1104 | ||||
16
|
RBBP5 | ENSG00000117222 | RB binding protein 5, histone lysine methyltransferase complex subunit | ||
| Q15291 | ||||
| 5929 | ||||
22
|
POLR2E | ENSG00000099817 | RNA polymerase II subunit E | ||
| A0A087WVN5 A0A087WVZ9 A0A087WWX0 A0A0A0MQR7 K7EJ87 K7EQN2 P19388 | ||||
| 5434 | ||||
| Cytosolic DNA-sensing pathway | ||||
| RNA polymerase | ||||
24
|
POLR2A | ENSG00000181222 | RNA polymerase II subunit A | ||
| A0A590UJN4 A0A590UKB6 P24928 | ||||
| 5430 | ||||
| RNA polymerase | ||||
13
|
STUB1 | ENSG00000103266 | STIP1 homology and U-box containing protein 1 | ||
| H3BS86 H3BTA3 H3BUD0 Q9UNE7 V9GYH3 | ||||
| 10273 | ||||
| Ubiquitin mediated proteolysis Protein processing in endoplasmic reticulum | ||||
20
|
EDF1 | ENSG00000107223 | endothelial differentiation related factor 1 | ||
| O60869 | ||||
| 8721 | ||||
20
|
RRP36 | ENSG00000124541 | ribosomal RNA processing 36 | ||
| Q96EU6 U3KPZ9 | ||||
| 88745 | ||||
17
|
TSEN54 | ENSG00000182173 | tRNA splicing endonuclease subunit 54 | ||
| E7EN92 J3KRC5 J3QLM6 J3QRQ5 J9JIH8 Q7Z6J9 | ||||
| 283989 | ||||
21
|
DDX47 | ENSG00000213782 | DEAD-box helicase 47 | ||
| F5H1N9 Q9H0S4 | ||||
| 51202 | ||||
25
|
NOP2 | ENSG00000111641 | NOP2 nucleolar protein | ||
| F5GWB7 F5GYR3 F5H359 F5H5X6 F5H709 F5H8G6 P46087 | ||||
| 4839 | ||||
27
|
PCNA | ENSG00000132646 | proliferating cell nuclear antigen | ||
| P12004 | ||||
| 5111 | ||||
| Tight junction Cell cycle | ||||
| DNA replication Mismatch repair Nucleotide excision repair Base excision repair | ||||
21
|
MSH6 | ENSG00000116062 | mutS homolog 6 | ||
| A0A087WWJ1 A0A087WYT6 A0A494C0M1 C9J7Y7 C9J8Y8 C9JH55 F8W7G9 F8WAX8 P52701 | ||||
| 2956 | ||||
| Mismatch repair | ||||
15
|
POP7 | ENSG00000172336 | POP7 homolog, ribonuclease P/MRP subunit | ||
| C9JYM0 O75817 | ||||
| 10248 | ||||
| Ribosome biogenesis in eukaryotes RNA transport | ||||
23
|
NOP10 | ENSG00000182117 | NOP10 ribonucleoprotein | ||
| H0YM60 Q9NPE3 | ||||
| 55505 | ||||
| Ribosome biogenesis in eukaryotes | ||||
14
|
RAD21 | ENSG00000164754 | RAD21 cohesin complex component | ||
| E5RFV8 E5RFZ5 E5RG18 E5RI01 E5RIN7 E5RJK5 E5RJW1 O60216 | ||||
| 5885 | ||||
| Cell cycle | ||||
20
|
POLA1 | ENSG00000101868 | DNA polymerase alpha 1, catalytic subunit | ||
| A0A087WU64 A0A5F9ZHW2 A6NMQ1 P09884 | ||||
| 5422 | ||||
| DNA replication | ||||
22
|
EXOSC9 | ENSG00000123737 | exosome component 9 | ||
| D6R905 D6RA17 D6RAP4 D6RIY6 H0Y9L5 Q06265 | ||||
| 5393 | ||||
| RNA degradation | ||||
10
|
TSEN15 | ENSG00000198860 | tRNA splicing endonuclease subunit 15 | ||
| A0A2R8Y5L0 A0A2R8Y5Q6 A0A2R8Y5W5 A0A2R8Y6A4 A0A2R8Y6B3 A0A2R8Y6M5 A0A2R8Y7T8 A0A2R8YDU8 A0A2R8YEM0 A0A2R8YG40 A0A2R8YHG0 A0A2U3TZM3 E9PPN1 F2Z3M0 H0YCV5 Q8WW01 | ||||
| 116461 | ||||
9
|
PCF11 | ENSG00000165494 | PCF11 cleavage and polyadenylation factor subunit | ||
| E9PKN0 E9PNY7 E9PQ01 E9PQF9 O94913 | ||||
| 51585 | ||||
| mRNA surveillance pathway | ||||
9
|
CDKN2AIP | ENSG00000168564 | CDKN2A interacting protein | ||
| D6RGD2 J3KNE1 Q9NXV6 | ||||
| 55602 | ||||
2
|
FBXW11 | ENSG00000072803 | F-box and WD repeat domain containing 11 | ||
| E5RG78 E5RGC1 E5RH92 Q9UKB1 | ||||
| 23291 | ||||
| Oocyte meiosis Wnt signaling pathway Hedgehog signaling pathway Hippo signaling pathway | ||||
| Ubiquitin mediated proteolysis |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
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jSquid_subnetworks.xml | 293.20 KB | |
H.sapiens_subnetwork.tsv | 51.92 KB |