Found 1 of 1 query genes

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Query interactions

Interaction partners
Confidence
Network
MEX
PIN
SCL
PHP
MIR
TFB
PEX
GIN
DOM
QMS
GRG
Evidence types
HSA
MMU
RNO
CFA
GGA
DRE
CIN
DME
CEL
BTA
SCE
ATH
SPO
BSU
ECO
PFA
DDI
SSO
SSC
MJA
OSA
Species
In Gold st.

ID Query gene
ID Query ortholog

Log-likelihood ratio (LLR)
	Highly positive
	Positive
	Zero
	Negative
	Highly negative
Known coupling
	This network
	Other network

2. ENSG00000167645
3. Yip1 interacting factor…
- 2. YIPF5
  3. Yip1 domain family memb…
  4. 1.000
  5. PPI
- 2. RAB1B
  3. RAB1B, member RAS oncog…
  4. 1.000
  5. PPI
- 2. YIPF7
  3. Yip1 domain family memb…
  4. 1.000
  5. PPI
- 2. IER3IP1
  3. immediate early respons…
  4. 1.000
  5. PPI
- 2. RAB1A
  3. RAB1A, member RAS oncog…
  4. 1.000
  5. PPI
- 2. SEC13
  3. SEC13 homolog, nuclear …
  4. 1.000
  5. Metabolic
- 2. RAB11A
  3. RAB11A, member RAS onco…
  4. 0.999
  5. PPI
- 2. ESYT1
  3. extended synaptotagmin 1
  4. 0.999
  5. PPI
- 2. RAB5C
  3. RAB5C, member RAS oncog…
  4. 0.998
  5. PPI
- 2. DERL1
  3. derlin 1
  4. 0.998
  5. PPI
- 2. RAB5A
  3. RAB5A, member RAS oncog…
  4. 0.998
  5. PPI
- 2. RAB11B
  3. RAB11B, member RAS onco…
  4. 0.998
  5. PPI
- 2. RAB10
  3. RAB10, member RAS oncog…
  4. 0.997
  5. PPI
- 2. COPE
  3. COPI coat complex subun…
  4. 0.997
  5. Metabolic
- 2. RAB5B
  3. RAB5B, member RAS oncog…
  4. 0.997
  5. PPI
- 2. SEC24A
  3. SEC24 homolog A, COPII …
  4. 0.994
  5. PPI
- 2. RER1
  3. retention in endoplasmi…
  4. 0.994
  5. Metabolic
- 2. HM13
  3. histocompatibility mino…
  4. 0.993
  5. Metabolic
- 2. RAB8A
  3. RAB8A, member RAS oncog…
  4. 0.993
  5. PPI
- 2. RABAC1
  3. Rab acceptor 1
  4. 0.992
  5. PPI
- 2. RAB6A
  3. RAB6A, member RAS oncog…
  4. 0.992
  5. PPI
- 2. COPB1
  3. COPI coat complex subun…
  4. 0.991
  5. Metabolic
- 2. TMED10
  3. transmembrane p24 traff…
  4. 0.991
  5. Metabolic
- 2. USO1
  3. USO1 vesicle transport …
  4. 0.991
  5. Metabolic
- 2. ATG9A
  3. autophagy related 9A
  4. 0.991
  5. PPI
- 2. REEP6
  3. receptor accessory prot…
  4. 0.990
  5. PPI
- 2. SEC24B
  3. SEC24 homolog B, COPII …
  4. 0.989
  5. PPI
- 2. SLC35B1
  3. solute carrier family 3…
  4. 0.989
  5. Metabolic
- 2. GNPNAT1
  3. glucosamine-phosphate N…
  4. 0.989
  5. Metabolic
- 2. TMED2
  3. transmembrane p24 traff…
  4. 0.988
  5. Metabolic

Subnetwork gene interactions

ENSG00000167645

Yip1 interacting factor homolog B, membrane trafficking protein

FunCoup

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Ensembl

ENSG00000167645

UniProt

NCBI

90522

YIPF5

Yip1 domain family member 5

FunCoup

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Ensembl

ENSG00000145817

UniProt

NCBI

81555

RAB5C

RAB5C, member RAS oncogene family

FunCoup

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Ensembl

ENSG00000108774

UniProt

NCBI

5878

RER1

retention in endoplasmic reticulum sorting receptor 1

FunCoup

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Ensembl

ENSG00000157916

UniProt

NCBI

11079

RAB5B

RAB5B, member RAS oncogene family

FunCoup

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Ensembl

ENSG00000111540

UniProt

NCBI

5869

IER3IP1

immediate early response 3 interacting protein 1

FunCoup

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Ensembl

ENSG00000134049

UniProt

NCBI

51124

RAB5A

RAB5A, member RAS oncogene family

FunCoup

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Ensembl

ENSG00000144566

UniProt

NCBI

5868

GNPNAT1

glucosamine-phosphate N-acetyltransferase 1

FunCoup

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Ensembl

ENSG00000100522

UniProt

NCBI

64841

SEC24A

SEC24 homolog A, COPII coat complex component

FunCoup

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Ensembl

ENSG00000113615

UniProt

NCBI

10802

SEC13

SEC13 homolog, nuclear pore and COPII coat complex component

FunCoup

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Ensembl

ENSG00000157020

UniProt

NCBI

6396

RAB6A

RAB6A, member RAS oncogene family

FunCoup

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Ensembl

ENSG00000175582

UniProt

NCBI

5870

COPE

COPI coat complex subunit epsilon

FunCoup

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Ensembl

ENSG00000105669

UniProt

NCBI

11316

SEC24B

SEC24 homolog B, COPII coat complex component

FunCoup

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Ensembl

ENSG00000138802

UniProt

O95487

NCBI

10427

RAB1B

RAB1B, member RAS oncogene family

FunCoup

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Ensembl

ENSG00000174903

UniProt

NCBI

81876

RAB11B

RAB11B, member RAS oncogene family

FunCoup

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Ensembl

ENSG00000185236

UniProt

NCBI

9230

TMED10

transmembrane p24 trafficking protein 10

FunCoup

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Ensembl

ENSG00000170348

UniProt

NCBI

10972

TMED2

transmembrane p24 trafficking protein 2

FunCoup

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Ensembl

ENSG00000086598

UniProt

NCBI

10959

USO1

USO1 vesicle transport factor

FunCoup

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Ensembl

ENSG00000138768

UniProt

O60763

NCBI

8615

HM13

histocompatibility minor 13

FunCoup

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Ensembl

ENSG00000101294

UniProt

NCBI

81502

RAB11A

RAB11A, member RAS oncogene family

FunCoup

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Ensembl

ENSG00000103769

UniProt

NCBI

8766

RABAC1

Rab acceptor 1

FunCoup

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Ensembl

ENSG00000105404

UniProt

NCBI

10567

COPB1

COPI coat complex subunit beta 1

FunCoup

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Ensembl

ENSG00000129083

UniProt

NCBI

1315

DERL1

derlin 1

FunCoup

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Ensembl

ENSG00000136986

UniProt

NCBI

79139

RAB1A

RAB1A, member RAS oncogene family

FunCoup

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Ensembl

ENSG00000138069

UniProt

NCBI

5861

REEP6

receptor accessory protein 6

FunCoup

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Ensembl

ENSG00000115255

UniProt

NCBI

92840

RAB10

RAB10, member RAS oncogene family

FunCoup

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Ensembl

ENSG00000084733

UniProt

P61026

NCBI

10890

SLC35B1

solute carrier family 35 member B1

FunCoup

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Ensembl

ENSG00000121073

UniProt

NCBI

10237

ESYT1

extended synaptotagmin 1

FunCoup

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Ensembl

ENSG00000139641

UniProt

NCBI

23344

RAB8A

RAB8A, member RAS oncogene family

FunCoup

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Ensembl

ENSG00000167461

UniProt

P61006

NCBI

4218

YIPF7

Yip1 domain family member 7

FunCoup

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Ensembl

ENSG00000177752

UniProt

NCBI

285525

ATG9A

autophagy related 9A

FunCoup

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Ensembl

ENSG00000198925

UniProt

NCBI

79065

Query genes

		Identifier	Description
30	ENSG00000167645	ENSG00000167645	Yip1 interacting factor homolog B, membrane trafficking protein
		UniProt	K7EJQ6 K7EPQ7 K7ERQ0 K7ERY2 Q5BJH7
		NCBI	90522

Subnetwork genes

		Identifier	Description
27	YIPF5	ENSG00000145817	Yip1 domain family member 5
		UniProt	E5RGR9 E5RHH4 Q969M3
		NCBI	81555
24	RAB5C	ENSG00000108774	RAB5C, member RAS oncogene family
		UniProt	F8VSF8 F8VVK3 F8VWU4 K7ENY4 P51148
		NCBI	5878
		KEGG signaling	Ras signaling pathway
		KEGG metabolic	Phagosome Endocytosis
25	RER1	ENSG00000157916	retention in endoplasmic reticulum sorting receptor 1
		UniProt	A0A0A0MR06 O15258 Q5T091 Q5T092 Q5T093
		NCBI	11079
24	RAB5B	ENSG00000111540	RAB5B, member RAS oncogene family
		UniProt	F8VPW9 F8VUA5 F8VVZ0 F8VWZ7 P61020
		NCBI	5869
		KEGG signaling	Ras signaling pathway
		KEGG metabolic	Phagosome Endocytosis
17	IER3IP1	ENSG00000134049	immediate early response 3 interacting protein 1
		UniProt	A0A1W2PNR9 Q9Y5U9
		NCBI	51124
26	RAB5A	ENSG00000144566	RAB5A, member RAS oncogene family
		UniProt	C9J3X8 F8WCY6 F8WD79 P20339
		NCBI	5868
		KEGG signaling	Ras signaling pathway
		KEGG metabolic	Phagosome Endocytosis
24	GNPNAT1	ENSG00000100522	glucosamine-phosphate N-acetyltransferase 1
		UniProt	G3V4W4 G3V5E4 Q96EK6
		NCBI	64841
		KEGG metabolic	Amino sugar and nucleotide sugar metabolism
26	SEC24A	ENSG00000113615	SEC24 homolog A, COPII coat complex component
		UniProt	H0Y9J6 O95486
		NCBI	10802
		KEGG metabolic	Protein processing in endoplasmic reticulum
29	SEC13	ENSG00000157020	SEC13 homolog, nuclear pore and COPII coat complex component
		UniProt	A8MXL6 C9J0S2 C9JBJ5 C9JIB6 E7ERC8 P55735
		NCBI	6396
		KEGG signaling	mTOR signaling pathway
		KEGG metabolic	Protein processing in endoplasmic reticulum RNA transport
25	RAB6A	ENSG00000175582	RAB6A, member RAS oncogene family
		UniProt	F5GX61 F5H3K7 P20340
		NCBI	5870
27	COPE	ENSG00000105669	COPI coat complex subunit epsilon
		UniProt	M0QXB4 M0R061 O14579
		NCBI	11316
23	SEC24B	ENSG00000138802	SEC24 homolog B, COPII coat complex component
		UniProt	O95487
		NCBI	10427
		KEGG metabolic	Protein processing in endoplasmic reticulum
26	RAB1B	ENSG00000174903	RAB1B, member RAS oncogene family
		UniProt	E9PLD0 Q9H0U4
		NCBI	81876
22	RAB11B	ENSG00000185236	RAB11B, member RAS oncogene family
		UniProt	M0R2D0 M0R377 Q15907
		NCBI	9230
		KEGG signaling	AMPK signaling pathway
		KEGG metabolic	Endocytosis
28	TMED10	ENSG00000170348	transmembrane p24 trafficking protein 10
		UniProt	G3V2K7 P49755
		NCBI	10972
29	TMED2	ENSG00000086598	transmembrane p24 trafficking protein 2
		UniProt	E7EQ72 F5GX39 Q15363
		NCBI	10959
24	USO1	ENSG00000138768	USO1 vesicle transport factor
		UniProt	O60763
		NCBI	8615
15	HM13	ENSG00000101294	histocompatibility minor 13
		UniProt	A0A075B6F6 A0A087WVH6 A0A0C4DGU3 A0A0S2Z6F0 A0A3B3IT72 A0A3B3IUB5 Q8TCT9
		NCBI	81502
27	RAB11A	ENSG00000103769	RAB11A, member RAS oncogene family
		UniProt	B4DQU5 H3BMH2 H3BN38 H3BSC1 P62491
		NCBI	8766
		KEGG metabolic	Endocytosis
20	RABAC1	ENSG00000105404	Rab acceptor 1
		UniProt	M0QXH1 M0QXU8 M0R1H9 M0R3D4 Q9UI14
		NCBI	10567
27	COPB1	ENSG00000129083	COPI coat complex subunit beta 1
		UniProt	E9PKQ1 E9PP63 E9PP73 P53618
		NCBI	1315
11	DERL1	ENSG00000136986	derlin 1
		UniProt	B4E1G1 E5RGY0 Q9BUN8
		NCBI	79139
		KEGG metabolic	Protein processing in endoplasmic reticulum
27	RAB1A	ENSG00000138069	RAB1A, member RAS oncogene family
		UniProt	E7END7 P62820
		NCBI	5861
		KEGG metabolic	Autophagy - animal
15	REEP6	ENSG00000115255	receptor accessory protein 6
		UniProt	A8MXN1 Q96HR9
		NCBI	92840
24	RAB10	ENSG00000084733	RAB10, member RAS oncogene family
		UniProt	P61026
		NCBI	10890
		KEGG signaling	AMPK signaling pathway
		KEGG metabolic	Endocytosis
17	SLC35B1	ENSG00000121073	solute carrier family 35 member B1
		UniProt	D6R981 D6R9G9 D6RB73 D6RDY9 D6RE58 D6RF81 D6RG34 D6RHG0 P78383
		NCBI	10237
4	ESYT1	ENSG00000139641	extended synaptotagmin 1
		UniProt	F8VZB1 Q9BSJ8
		NCBI	23344
23	RAB8A	ENSG00000167461	RAB8A, member RAS oncogene family
		UniProt	P61006
		NCBI	4218
		KEGG signaling	Tight junction AMPK signaling pathway
		KEGG metabolic	Endocytosis Autophagy - animal
13	YIPF7	ENSG00000177752	Yip1 domain family member 7
		UniProt	J3KR00 Q8N8F6 V9GZ30
		NCBI	285525
23	ATG9A	ENSG00000198925	autophagy related 9A
		UniProt	C9IYZ9 C9JD65 C9JDK4 C9JFV2 C9JKV7 C9JS65 C9JX27 C9JXG2 F2Z3I6 H7C1G6 Q7Z3C6
		NCBI	79065
		KEGG metabolic	Autophagy - animal

Enrichment analysis

Search for enrichment of pathways or functional gene sets for your subnetwork genes

To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX

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	jSquid_subnetworks.xml	307.18 KB
	H.sapiens_subnetwork.tsv	67.73 KB

Species:

Network information:

Filter Results:

Network appearance:

ENSG00000167645

YIPF5

RAB5C

RER1

RAB5B

IER3IP1

RAB5A

GNPNAT1

SEC24A

SEC13

RAB6A

COPE

SEC24B

RAB1B

RAB11B

TMED10

TMED2

USO1

HM13

RAB11A

RABAC1

COPB1

DERL1

RAB1A

REEP6

RAB10

SLC35B1

ESYT1

RAB8A

YIPF7

ATG9A

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