Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000166407
- LIM domain only 1
- LMO4
- LIM domain only 4
- 0.975
- Complex
- BCL11A
- BAF chromatin remodelin…
- 0.928
- PPI
- LDB1
- LIM domain binding 1
- 0.913
- PPI
- GATA3
- GATA binding protein 3
- 0.905
- PPI
- XRCC1
- X-ray repair cross comp…
- 0.796
- Complex
- SSBP2
- single stranded DNA bin…
- 0.730
- Complex
- PHC2
- polyhomeotic homolog 2
- 0.682
- PPI
- TAL1
- TAL bHLH transcription …
- 0.649
- PPI
- SSBP3
- single stranded DNA bin…
- 0.547
- PPI
- LHX4
- LIM homeobox 4
- 0.539
- Complex
Subnetwork gene interactions
ENSG00000166407
LIM domain only 1
FunCoup
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- Ensembl
- UniProt
- NCBI
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor
FunCoup
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- Ensembl
- UniProt
- NCBI
LDB1
LIM domain binding 1
FunCoup
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- Ensembl
- UniProt
- NCBI
SSBP3
single stranded DNA binding protein 3
FunCoup
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- Ensembl
- UniProt
- NCBI
SSBP2
single stranded DNA binding protein 2
FunCoup
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- Ensembl
- UniProt
- NCBI
XRCC1
X-ray repair cross complementing 1
FunCoup
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- Ensembl
- UniProt
- NCBI
LMO4
LIM domain only 4
FunCoup
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- Ensembl
- UniProt
- NCBI
BCL11A
BAF chromatin remodeling complex subunit BCL11A
FunCoup
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- Ensembl
- UniProt
- A0A0J9YXG2
- A0A0J9YY13
- A0A0J9YYJ9
- A0A2R8Y2E8
- A0A2R8Y7B0
- A0A2R8Y7W4
- A0A2R8YCR5
- A0A2R8YDS7
- A0A2R8YDW6
- A0A2R8YEK1
- A0A2R8YGT9
- A0A2R8YHH4
- A0A2U3TZJ5
- Q9H165
- NCBI
LHX4
LIM homeobox 4
FunCoup
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- Ensembl
- UniProt
- NCBI
GATA3
GATA binding protein 3
FunCoup
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- Ensembl
- UniProt
- NCBI
PHC2
polyhomeotic homolog 2
FunCoup
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- Add to current query
- Ensembl
- UniProt
- NCBI
Query genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
10
|
ENSG00000166407 | ENSG00000166407 | LIM domain only 1 | ||
| E9PK83 P25800 | ||||
| 4004 |
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
5
|
TAL1 | ENSG00000162367 | TAL bHLH transcription factor 1, erythroid differentiation factor | ||
| P17542 | ||||
| 6886 | ||||
8
|
LDB1 | ENSG00000198728 | LIM domain binding 1 | ||
| Q86U70 | ||||
| 8861 | ||||
6
|
SSBP3 | ENSG00000157216 | single stranded DNA binding protein 3 | ||
| A0A087WVT6 E9PK49 Q5T863 Q9BWW4 Q9NW25 | ||||
| 23648 | ||||
6
|
SSBP2 | ENSG00000145687 | single stranded DNA binding protein 2 | ||
| A0A087X159 D6RAC5 H0Y9M5 H0Y9V4 P81877 | ||||
| 23635 | ||||
6
|
XRCC1 | ENSG00000073050 | X-ray repair cross complementing 1 | ||
| F5H8D7 M0QYS5 M0QZ96 M0R0D2 M0R1U8 P18887 | ||||
| 7515 | ||||
| Base excision repair | ||||
5
|
LMO4 | ENSG00000143013 | LIM domain only 4 | ||
| P61968 | ||||
| 8543 | ||||
1
|
BCL11A | ENSG00000119866 | BAF chromatin remodeling complex subunit BCL11A | ||
| A0A0J9YXG2 A0A0J9YY13 A0A0J9YYJ9 A0A2R8Y2E8 A0A2R8Y7B0 A0A2R8Y7W4 A0A2R8YCR5 A0A2R8YDS7 A0A2R8YDW6 A0A2R8YEK1 A0A2R8YGT9 A0A2R8YHH4 A0A2U3TZJ5 Q9H165 | ||||
| 53335 | ||||
3
|
LHX4 | ENSG00000121454 | LIM homeobox 4 | ||
| H0YKF4 Q969G2 | ||||
| 89884 | ||||
2
|
GATA3 | ENSG00000107485 | GATA binding protein 3 | ||
| A0A2R8Y2A9 A0A2R8Y4T2 P23771 | ||||
| 2625 | ||||
2
|
PHC2 | ENSG00000134686 | polyhomeotic homolog 2 | ||
| A0A0A0MSI2 B3KPJ4 Q8IXK0 | ||||
| 1912 |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
Copied subnetwork genes to clipboard
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jSquid_subnetworks.xml | 107.15 KB | |
H.sapiens_subnetwork.tsv | 4.22 KB |