Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000164164
- OTU deubiquitinase 4
- EXOSC8
- exosome component 8
- 0.902
- PPI
- ZNF598
- zinc finger protein 598…
- 0.886
- PPI
- FXR2
- FMR1 autosomal homolog 2
- 0.821
- PPI
- PRPF4
- pre-mRNA processing fac…
- 0.754
- PPI
- USP7
- ubiquitin specific pept…
- 0.722
- PPI
- BAG5
- BAG cochaperone 5
- 0.719
- PPI
- RBFOX2
- RNA binding fox-1 homol…
- 0.710
- PPI
- UBC
- ubiquitin C
- 0.710
- PPI
- SPDL1
- spindle apparatus coile…
- 0.667
- PPI
- RC3H1
- ring finger and CCCH-ty…
- 0.639
- PPI
- OAT
- ornithine aminotransfer…
- 0.639
- PPI
- ALKBH2
- alkB homolog 2, alpha-k…
- 0.637
- PPI
- ATG12
- autophagy related 12
- 0.624
- PPI
- REL
- REL proto-oncogene, NF-…
- 0.623
- PPI
- ALKBH3
- alkB homolog 3, alpha-k…
- 0.521
- PPI
- PCGF1
- polycomb group ring fin…
- 0.474
- PPI
- PCBP1
- poly(rC) binding protei…
- 0.464
- PPI
- CBWD1
- COBW domain containing 1
- 0.457
- Complex
- GPHN
- gephyrin
- 0.430
- Complex
Subnetwork gene interactions
ENSG00000164164
OTU deubiquitinase 4
FunCoup
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- Ensembl
- UniProt
- NCBI
EXOSC8
exosome component 8
FunCoup
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- Ensembl
- UniProt
- NCBI
PCBP1
poly(rC) binding protein 1
FunCoup
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- Ensembl
- UniProt
- NCBI
UBC
ubiquitin C
FunCoup
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- Ensembl
- UniProt
- NCBI
OAT
ornithine aminotransferase
FunCoup
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- Ensembl
- UniProt
- NCBI
REL
REL proto-oncogene, NF-kB subunit
FunCoup
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- Ensembl
- UniProt
- NCBI
ALKBH3
alkB homolog 3, alpha-ketoglutaratedependent dioxygenase
FunCoup
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- Ensembl
- UniProt
- NCBI
CBWD1
COBW domain containing 1
FunCoup
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- Add to current query
- Ensembl
- UniProt
- A0A087WTC0
- A0A087WU37
- A0A087WVU7
- A0A087WWK6
- A0A087WY70
- A0A087WZQ3
- A0A087X0Y9
- A0A087X140
- A0A087X1Y1
- A0A0B4J1T6
- F2Z2T4
- Q9BRT8
- NCBI
RC3H1
ring finger and CCCH-type domains 1
FunCoup
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- Ensembl
- UniProt
- NCBI
ZNF598
zinc finger protein 598, E3 ubiquitin ligase
FunCoup
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- Ensembl
- UniProt
- NCBI
USP7
ubiquitin specific peptidase 7
FunCoup
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- Ensembl
- UniProt
- NCBI
GPHN
gephyrin
FunCoup
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- Ensembl
- UniProt
- NCBI
BAG5
BAG cochaperone 5
FunCoup
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- Ensembl
- UniProt
- NCBI
ALKBH2
alkB homolog 2, alpha-ketoglutarate dependent dioxygenase
FunCoup
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- Ensembl
- UniProt
- NCBI
PRPF4
pre-mRNA processing factor 4
FunCoup
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- Add to current query
- Ensembl
- UniProt
- NCBI
RBFOX2
RNA binding fox-1 homolog 2
FunCoup
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- Ensembl
- UniProt
- NCBI
FXR2
FMR1 autosomal homolog 2
FunCoup
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- Ensembl
- UniProt
- NCBI
SPDL1
spindle apparatus coiled-coil protein 1
FunCoup
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- Ensembl
- UniProt
- NCBI
ATG12
autophagy related 12
FunCoup
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- Ensembl
- UniProt
- NCBI
PCGF1
polycomb group ring finger 1
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Query genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
19
|
ENSG00000164164 | ENSG00000164164 | OTU deubiquitinase 4 | ||
| D6RA27 D6RI06 Q01804 | ||||
| 54726 |
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
6
|
EXOSC8 | ENSG00000120699 | exosome component 8 | ||
| H7C581 H7C5Z2 Q96B26 | ||||
| 11340 | ||||
| RNA degradation | ||||
7
|
PCBP1 | ENSG00000169564 | poly(rC) binding protein 1 | ||
| Q15365 | ||||
| 5093 | ||||
| Spliceosome | ||||
5
|
UBC | ENSG00000150991 | ubiquitin C | ||
| F5GXK7 F5GYU3 F5GZ39 F5H265 F5H2Z3 F5H388 F5H6Q2 F5H747 P0CG48 Q5PY61 Q96C32 | ||||
| 7316 | ||||
| PPAR signaling pathway | ||||
| Ubiquitin mediated proteolysis | ||||
4
|
OAT | ENSG00000065154 | ornithine aminotransferase | ||
| P04181 | ||||
| 4942 | ||||
| Arginine and proline metabolism | ||||
2
|
REL | ENSG00000162924 | REL proto-oncogene, NF-kB subunit | ||
| A0A2R8Y7Q6 Q04864 | ||||
| 5966 | ||||
| Ras signaling pathway | ||||
2
|
ALKBH3 | ENSG00000166199 | alkB homolog 3, alpha-ketoglutaratedependent dioxygenase | ||
| E9PN35 E9PRD0 E9PRJ2 E9PSA5 H0YDH4 Q96Q83 | ||||
| 221120 | ||||
2
|
CBWD1 | ENSG00000172785 | COBW domain containing 1 | ||
| A0A087WTC0 A0A087WU37 A0A087WVU7 A0A087WWK6 A0A087WY70 A0A087WZQ3 A0A087X0Y9 A0A087X140 A0A087X1Y1 A0A0B4J1T6 F2Z2T4 Q9BRT8 | ||||
| 55871 | ||||
2
|
RC3H1 | ENSG00000135870 | ring finger and CCCH-type domains 1 | ||
| Q5TC82 | ||||
| 149041 | ||||
1
|
ZNF598 | ENSG00000167962 | zinc finger protein 598, E3 ubiquitin ligase | ||
| H3BPF3 H3BPG6 H3BQQ2 H3BR87 Q86UK7 | ||||
| 90850 | ||||
4
|
USP7 | ENSG00000187555 | ubiquitin specific peptidase 7 | ||
| F5H2X1 H3BMF6 H3BND8 H3BQD1 H3BRA2 H3BRI4 H3BTM1 H3BUV0 H3BVA7 I3L2D8 Q93009 | ||||
| 7874 | ||||
| FoxO signaling pathway | ||||
3
|
GPHN | ENSG00000171723 | gephyrin | ||
| F5H039 G3V355 G3V4D2 G3V4R0 G3V582 H0YIY4 H0YJ30 H0YJR5 Q9NQX3 | ||||
| 10243 | ||||
| GABAergic synapse | ||||
| Folate biosynthesis | ||||
1
|
BAG5 | ENSG00000166170 | BAG cochaperone 5 | ||
| G3V274 Q9UL15 | ||||
| 9529 | ||||
1
|
ALKBH2 | ENSG00000189046 | alkB homolog 2, alpha-ketoglutarate dependent dioxygenase | ||
| F5GZZ0 F5H5X2 Q6NS38 S4R3T5 | ||||
| 121642 | ||||
5
|
PRPF4 | ENSG00000136875 | pre-mRNA processing factor 4 | ||
| O43172 | ||||
| 9128 | ||||
| Spliceosome | ||||
2
|
RBFOX2 | ENSG00000100320 | RNA binding fox-1 homolog 2 | ||
| B0QYV1 B0QYY4 B0QYY6 B0QYY7 O43251 S4R3K7 S4R469 | ||||
| 23543 | ||||
2
|
FXR2 | ENSG00000129245 | FMR1 autosomal homolog 2 | ||
| I3L1Z2 P51116 | ||||
| 9513 | ||||
| RNA transport | ||||
1
|
SPDL1 | ENSG00000040275 | spindle apparatus coiled-coil protein 1 | ||
| D6R936 D6RC83 D6RCL1 D6RDK5 D6REZ1 D6RIB8 D6RIF7 H0YBG5 H7C5V2 Q96EA4 | ||||
| 54908 | ||||
1
|
ATG12 | ENSG00000145782 | autophagy related 12 | ||
| D6RB14 H0Y9W4 H0YA29 H7BYD7 O94817 | ||||
| 9140 | ||||
| RIG-I-like receptor signaling pathway NOD-like receptor signaling pathway FoxO signaling pathway | ||||
| Autophagy - animal | ||||
2
|
PCGF1 | ENSG00000115289 | polycomb group ring finger 1 | ||
| Q9BSM1 | ||||
| 84759 |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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Copied subnetwork genes to clipboard
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jSquid_subnetworks.xml | 144.24 KB | |
H.sapiens_subnetwork.tsv | 5.68 KB |