- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000160075
- SSU72 homolog, RNA poly…
- CPSF2
- cleavage and polyadenyl…
- 1.000
- PPI
- CPSF3
- cleavage and polyadenyl…
- 1.000
- PPI
- STAG2
- stromal antigen 2
- 1.000
- PPI
- CPSF1
- cleavage and polyadenyl…
- 1.000
- PPI
- TXNDC9
- thioredoxin domain cont…
- 1.000
- PPI
- POLR2A
- RNA polymerase II subun…
- 1.000
- PPI
- RAD21
- RAD21 cohesin complex c…
- 0.999
- PPI
- SMC3
- structural maintenance …
- 0.999
- PPI
- SYMPK
- symplekin
- 0.999
- PPI
- WDR82
- WD repeat domain 82
- 0.999
- PPI
- SMC1A
- structural maintenance …
- 0.998
- PPI
- PAPOLA
- poly(A) polymerase alpha
- 0.998
- PPI
- H2AC18
- H2A clustered histone 18
- 0.998
- PPI
- H2AC19
- H2A clustered histone 19
- 0.998
- PPI
- DDX11
- DEAD/H-box helicase 11
- 0.997
- PPI
- POLR2C
- RNA polymerase II subun…
- 0.996
- PPI
- GTF2B
- general transcription f…
- 0.996
- PPI
- PAPOLG
- poly(A) polymerase gamma
- 0.996
- PPI
- CDK7
- cyclin dependent kinase…
- 0.996
- PPI
- RPL27
- ribosomal protein L27
- 0.994
- Metabolic
- MRTO4
- MRT4 homolog, ribosome …
- 0.993
- Metabolic
- RPL6
- ribosomal protein L6
- 0.992
- Metabolic
- WDR46
- WD repeat domain 46
- 0.992
- Complex
- PPP1CA
- protein phosphatase 1 c…
- 0.992
- PPI
- CCT5
- chaperonin containing T…
- 0.991
- Metabolic
- RPS4X
- ribosomal protein S4 X-…
- 0.990
- Metabolic
- RPS11
- ribosomal protein S11
- 0.985
- Metabolic
- RPS24
- ribosomal protein S24
- 0.984
- Complex
- GRWD1
- glutamate rich WD repea…
- 0.983
- Metabolic
- POLR2B
- RNA polymerase II subun…
- 0.983
- Metabolic
ENSG00000160075
SSU72 homolog, RNA polymerase II CTD phosphatase
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
WDR82
WD repeat domain 82
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CDK7
cyclin dependent kinase 7
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RAD21
RAD21 cohesin complex component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR2C
RNA polymerase II subunit C
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SYMPK
symplekin
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CCT5
chaperonin containing TCP1 subunit 5
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
WDR46
WD repeat domain 46
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
GRWD1
glutamate rich WD repeat containing 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PAPOLA
poly(A) polymerase alpha
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SMC1A
structural maintenance of chromosomes 1A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
STAG2
stromal antigen 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPL27
ribosomal protein L27
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPS4X
ribosomal protein S4 X-linked
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CPSF1
cleavage and polyadenylation specific factor 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
MRTO4
MRT4 homolog, ribosome maturation factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR2B
RNA polymerase II subunit B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPL6
ribosomal protein L6
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
H2AC18
H2A clustered histone 18
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
GTF2B
general transcription factor IIB
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
H2AC19
H2A clustered histone 19
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR2A
RNA polymerase II subunit A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDX11
DEAD/H-box helicase 11
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPS24
ribosomal protein S24
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TXNDC9
thioredoxin domain containing 9
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CPSF2
cleavage and polyadenylation specific factor 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PPP1CA
protein phosphatase 1 catalytic subunit alpha
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RPS11
ribosomal protein S11
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PAPOLG
poly(A) polymerase gamma
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SMC3
structural maintenance of chromosomes 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CPSF3
cleavage and polyadenylation specific factor 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000160075 | ENSG00000160075 | SSU72 homolog, RNA polymerase II CTD phosphatase | ||
| Q9NP77 | ||||
| 29101 | ||||
| mRNA surveillance pathway |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
27
|
WDR82 | ENSG00000164091 | WD repeat domain 82 | ||
| C9J355 C9JBU3 Q6UXN9 | ||||
| 80335 | ||||
| mRNA surveillance pathway | ||||
14
|
CDK7 | ENSG00000134058 | cyclin dependent kinase 7 | ||
| D6R9G1 D6R9Z2 D6RAD4 D6REC6 D6RF14 D6RFL0 D6RGG9 D6RI01 D6RIG9 P50613 | ||||
| 1022 | ||||
| Cell cycle | ||||
| Basal transcription factors Nucleotide excision repair | ||||
24
|
RAD21 | ENSG00000164754 | RAD21 cohesin complex component | ||
| E5RFV8 E5RFZ5 E5RG18 E5RI01 E5RIN7 E5RJK5 E5RJW1 O60216 | ||||
| 5885 | ||||
| Cell cycle | ||||
27
|
POLR2C | ENSG00000102978 | RNA polymerase II subunit C | ||
| H3BRR2 P19387 | ||||
| 5432 | ||||
| RNA polymerase | ||||
18
|
SYMPK | ENSG00000125755 | symplekin | ||
| A0A087WUE9 M0QXP5 M0R033 M0R039 M0R180 M0R1C2 M0R3C7 Q92797 | ||||
| 8189 | ||||
| Tight junction | ||||
| mRNA surveillance pathway | ||||
30
|
CCT5 | ENSG00000150753 | chaperonin containing TCP1 subunit 5 | ||
| B7ZAR1 D6RIZ7 E7ENZ3 E9PCA1 H0Y914 H0Y958 P48643 | ||||
| 22948 | ||||
28
|
WDR46 | ENSG00000227057 | WD repeat domain 46 | ||
| H0Y6G3 O15213 | ||||
| 9277 | ||||
25
|
GRWD1 | ENSG00000105447 | glutamate rich WD repeat containing 1 | ||
| M0QX71 Q9BQ67 | ||||
| 83743 | ||||
21
|
PAPOLA | ENSG00000090060 | poly(A) polymerase alpha | ||
| A0A0C4DGK1 G3V3I9 G3V457 G3XAH6 H0YJ00 H0YJL4 P51003 | ||||
| 10914 | ||||
| mRNA surveillance pathway | ||||
22
|
SMC1A | ENSG00000072501 | structural maintenance of chromosomes 1A | ||
| G8JLG1 H0Y7K8 Q14683 V9GY57 V9GYN9 | ||||
| 8243 | ||||
| Oocyte meiosis Cell cycle | ||||
22
|
STAG2 | ENSG00000101972 | stromal antigen 2 | ||
| B1AMS8 B1AMS9 B1AMT0 B1AMT1 B1AMT2 B1AMT3 B1AMT4 E7ERE6 Q8N3U4 | ||||
| 10735 | ||||
| Cell cycle | ||||
25
|
RPL27 | ENSG00000131469 | ribosomal protein L27 | ||
| K7ELC7 K7EQQ9 K7ERY7 P61353 | ||||
| 6155 | ||||
| Ribosome | ||||
28
|
RPS4X | ENSG00000198034 | ribosomal protein S4 X-linked | ||
| P62701 | ||||
| 6191 | ||||
| Ribosome | ||||
28
|
CPSF1 | ENSG00000071894 | cleavage and polyadenylation specific factor 1 | ||
| A0A087WTV4 A0A087X101 E9PIM1 Q10570 | ||||
| 29894 | ||||
| mRNA surveillance pathway | ||||
25
|
MRTO4 | ENSG00000053372 | MRT4 homolog, ribosome maturation factor | ||
| Q9UKD2 | ||||
| 51154 | ||||
28
|
POLR2B | ENSG00000047315 | RNA polymerase II subunit B | ||
| A0A1W2PPT5 C9J2Y9 C9J4M6 C9JMN3 C9JZW8 P30876 | ||||
| 5431 | ||||
| RNA polymerase | ||||
24
|
RPL6 | ENSG00000089009 | ribosomal protein L6 | ||
| F8VR69 F8VU16 F8VWR1 F8VZ45 F8VZA3 Q02878 U3KQR5 | ||||
| 6128 | ||||
| Ribosome | ||||
19
|
H2AC18 | ENSG00000203812 | H2A clustered histone 18 | ||
| Q6FI13 | ||||
| 723790 8337 | ||||
20
|
GTF2B | ENSG00000137947 | general transcription factor IIB | ||
| B1APE1 B1APE2 Q00403 | ||||
| 2959 | ||||
| Basal transcription factors | ||||
19
|
H2AC19 | ENSG00000272196 | H2A clustered histone 19 | ||
| Q6FI13 | ||||
| 723790 8337 | ||||
25
|
POLR2A | ENSG00000181222 | RNA polymerase II subunit A | ||
| A0A590UJN4 A0A590UKB6 P24928 | ||||
| 5430 | ||||
| RNA polymerase | ||||
16
|
DDX11 | ENSG00000013573 | DEAD/H-box helicase 11 | ||
| B4DMS8 C9K0E8 F5GXJ8 F5GXL6 F5GYY1 F5H235 F5H2V9 F6WZM0 H0YFY8 H0YGL4 H0YGX9 Q96FC9 R4GNE1 | ||||
| 1663 | ||||
26
|
RPS24 | ENSG00000138326 | ribosomal protein S24 | ||
| A0A2R8Y849 A0A2R8Y8A0 A0A2R8YD14 E7ETK0 P62847 | ||||
| 6229 | ||||
| Ribosome | ||||
11
|
TXNDC9 | ENSG00000115514 | thioredoxin domain containing 9 | ||
| B8ZZX4 F8WBV5 F8WCJ3 G3XAJ4 O14530 | ||||
| 10190 | ||||
27
|
CPSF2 | ENSG00000165934 | cleavage and polyadenylation specific factor 2 | ||
| G3V3T7 G3V5T3 H0YJF4 Q9P2I0 | ||||
| 53981 | ||||
| mRNA surveillance pathway | ||||
26
|
PPP1CA | ENSG00000172531 | protein phosphatase 1 catalytic subunit alpha | ||
| E9PMD7 F5H037 F5H1L6 P62136 | ||||
| 5499 | ||||
| Long-term potentiation Focal adhesion Oocyte meiosis cAMP signaling pathway cGMP-PKG signaling pathway Adrenergic signaling in cardiomyocytes Dopaminergic synapse Vascular smooth muscle contraction Hippo signaling pathway Insulin signaling pathway Oxytocin signaling pathway | ||||
| mRNA surveillance pathway | ||||
27
|
RPS11 | ENSG00000142534 | ribosomal protein S11 | ||
| M0QZ90 M0QZC5 M0R1H5 M0R1H6 P62280 | ||||
| 6205 | ||||
| Ribosome | ||||
16
|
PAPOLG | ENSG00000115421 | poly(A) polymerase gamma | ||
| A0A0C4DH56 F8WAT4 H7C3W0 Q9BWT3 | ||||
| 64895 | ||||
| mRNA surveillance pathway | ||||
29
|
SMC3 | ENSG00000108055 | structural maintenance of chromosomes 3 | ||
| Q9UQE7 | ||||
| 9126 | ||||
| Oocyte meiosis Cell cycle | ||||
25
|
CPSF3 | ENSG00000119203 | cleavage and polyadenylation specific factor 3 | ||
| C9JZH6 G5E9W3 Q9UKF6 | ||||
| 51692 | ||||
| mRNA surveillance pathway |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
- Add to current query
jSquid_subnetworks.xml | 325.04 KB | |
H.sapiens_subnetwork.tsv | 72.92 KB |