- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000158545
- zinc finger CCCH-type c…
- SRRT
- serrate, RNA effector m…
- 1.000
- PPI
- SF3A2
- splicing factor 3a subu…
- 1.000
- PPI
- PRPF8
- pre-mRNA processing fac…
- 0.999
- PPI
- MTREX
- Mtr4 exosome RNA helica…
- 0.999
- PPI
- RBM15B
- RNA binding motif prote…
- 0.999
- PPI
- RNPS1
- RNA binding protein wit…
- 0.999
- PPI
- NCBP1
- nuclear cap binding pro…
- 0.999
- PPI
- SNW1
- SNW domain containing 1
- 0.999
- PPI
- LUC7L2
- LUC7 like 2, pre-mRNA s…
- 0.999
- PPI
- RBM15
- RNA binding motif prote…
- 0.999
- PPI
- U2AF2
- U2 small nuclear RNA au…
- 0.999
- PPI
- RBM25
- RNA binding motif prote…
- 0.998
- PPI
- PPIG
- peptidylprolyl isomeras…
- 0.998
- PPI
- ZC3H14
- zinc finger CCCH-type c…
- 0.998
- PPI
- EFTUD2
- elongation factor Tu GT…
- 0.997
- PPI
- VIRMA
- vir like m6A methyltran…
- 0.997
- PPI
- PRPF40A
- pre-mRNA processing fac…
- 0.997
- PPI
- SLTM
- SAFB like transcription…
- 0.997
- PPI
- PIP5K1A
- phosphatidylinositol-4-…
- 0.996
- PPI
- UPF1
- UPF1 RNA helicase and A…
- 0.996
- PPI
- RBM7
- RNA binding motif prote…
- 0.996
- PPI
- SMARCAD1
- SWI/SNF-related, matrix…
- 0.995
- PPI
- TERF2
- telomeric repeat bindin…
- 0.995
- PPI
- EZH2
- enhancer of zeste 2 pol…
- 0.994
- PPI
- CPSF4
- cleavage and polyadenyl…
- 0.993
- PPI
- PRPF4B
- pre-mRNA processing fac…
- 0.993
- PPI
- ISY1
- ISY1 splicing factor ho…
- 0.992
- PPI
- CHD4
- chromodomain helicase D…
- 0.991
- PPI
- CTR9
- CTR9 homolog, Paf1/RNA …
- 0.990
- PPI
- AQR
- aquarius intron-binding…
- 0.989
- PPI
ENSG00000158545
zinc finger CCCH-type containing 18
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNW1
SNW domain containing 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SF3A2
splicing factor 3a subunit 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CPSF4
cleavage and polyadenylation specific factor 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SRRT
serrate, RNA effector molecule
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NCBP1
nuclear cap binding protein subunit 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
VIRMA
vir like m6A methyltransferase associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM15B
RNA binding motif protein 15B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RNPS1
RNA binding protein with serine rich domain 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- H3BMM9
- H3BMS0
- H3BNI3
- H3BNU7
- H3BP82
- H3BPG5
- H3BRK4
- H3BTC0
- H3BTR6
- H3BTV0
- H3BTY0
- H3BUG0
- H3BUL0
- H3BV80
- Q15287
- NCBI
CHD4
chromodomain helicase DNA binding protein 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A0C4DGG9
- A0A2R8Y212
- A0A2R8Y425
- A0A2R8Y4X2
- A0A2R8Y512
- A0A2R8Y521
- A0A2R8Y539
- A0A2R8Y5J0
- A0A2R8Y5M9
- A0A2R8Y5Z7
- A0A2R8Y685
- A0A2R8Y6G9
- A0A2R8Y795
- A0A2R8Y7I0
- A0A2R8Y7M9
- A0A2R8Y7X1
- A0A2R8Y8B3
- A0A2R8Y8C1
- A0A2R8YD40
- A0A2R8YDJ9
- A0A2R8YDW2
- A0A2R8YE38
- A0A2R8YER1
- A0A2R8YFD8
- A0A2R8YFK9
- A0A2U3TZM0
- F5GWX5
- F5H596
- F5H6N4
- Q14839
- NCBI
PRPF40A
pre-mRNA processing factor 40 homolog A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
U2AF2
U2 small nuclear RNA auxiliary factor 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM25
RNA binding motif protein 25
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF4B
pre-mRNA processing factor 4B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM15
RNA binding motif protein 15
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ZC3H14
zinc finger CCCH-type containing 14
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A087WTC9
- A0A3B3IT62
- G3V240
- G3V256
- G3V2X4
- G3V3R9
- G3V3Y4
- G3V411
- G3V473
- G3V4R5
- G3V572
- G3V5I6
- H0YJ51
- H0YJ87
- H0YJA2
- Q6PJT7
- NCBI
PPIG
peptidylprolyl isomerase G
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SMARCAD1
SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SLTM
SAFB like transcription modulator
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EFTUD2
elongation factor Tu GTP binding domain containing 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
AQR
aquarius intron-binding spliceosomal factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
MTREX
Mtr4 exosome RNA helicase
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PIP5K1A
phosphatidylinositol-4-phosphate 5-kinase type 1 alpha
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LUC7L2
LUC7 like 2, pre-mRNA splicing factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ISY1
ISY1 splicing factor homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM7
RNA binding motif protein 7
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF8
pre-mRNA processing factor 8
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EZH2
enhancer of zeste 2 polycomb repressive complex 2 subunit
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TERF2
telomeric repeat binding factor 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
UPF1
UPF1 RNA helicase and ATPase
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
27
|
SNW1 | ENSG00000100603 | SNW domain containing 1 | ||
| G3V3A4 G3V4E0 G3V4X8 G3V5R3 Q13573 | ||||
| 22938 | ||||
| Notch signaling pathway | ||||
| Spliceosome | ||||
18
|
SF3A2 | ENSG00000104897 | splicing factor 3a subunit 2 | ||
| K7EMT0 Q15428 | ||||
| 8175 | ||||
| Spliceosome | ||||
7
|
CPSF4 | ENSG00000160917 | cleavage and polyadenylation specific factor 4 | ||
| B7Z7B0 C9JEV9 C9K0K2 F8WEL7 H7C016 H7C419 O95639 | ||||
| 10898 | ||||
| mRNA surveillance pathway | ||||
25
|
SRRT | ENSG00000087087 | serrate, RNA effector molecule | ||
| A0A087X0F4 A0A0A0MSP6 A0A286YEP7 C9JUL9 H7C0U8 H7C1K0 H7C3A1 Q9BXP5 | ||||
| 51593 | ||||
23
|
NCBP1 | ENSG00000136937 | nuclear cap binding protein subunit 1 | ||
| F2Z2T1 Q09161 X6R941 | ||||
| 4686 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
17
|
VIRMA | ENSG00000164944 | vir like m6A methyltransferase associated | ||
| H0YB68 H0YBN5 H0YC41 Q69YN4 | ||||
| 25962 | ||||
14
|
RBM15B | ENSG00000259956 | RNA binding motif protein 15B | ||
| Q8NDT2 | ||||
| 29890 | ||||
15
|
RNPS1 | ENSG00000205937 | RNA binding protein with serine rich domain 1 | ||
| H3BMM9 H3BMS0 H3BNI3 H3BNU7 H3BP82 H3BPG5 H3BRK4 H3BTC0 H3BTR6 H3BTV0 H3BTY0 H3BUG0 H3BUL0 H3BV80 Q15287 | ||||
| 10921 | ||||
| RNA transport mRNA surveillance pathway | ||||
14
|
CHD4 | ENSG00000111642 | chromodomain helicase DNA binding protein 4 | ||
| A0A0C4DGG9 A0A2R8Y212 A0A2R8Y425 A0A2R8Y4X2 A0A2R8Y512 A0A2R8Y521 A0A2R8Y539 A0A2R8Y5J0 A0A2R8Y5M9 A0A2R8Y5Z7 A0A2R8Y685 A0A2R8Y6G9 A0A2R8Y795 A0A2R8Y7I0 A0A2R8Y7M9 A0A2R8Y7X1 A0A2R8Y8B3 A0A2R8Y8C1 A0A2R8YD40 A0A2R8YDJ9 A0A2R8YDW2 A0A2R8YE38 A0A2R8YER1 A0A2R8YFD8 A0A2R8YFK9 A0A2U3TZM0 F5GWX5 F5H596 F5H6N4 Q14839 | ||||
| 1108 | ||||
25
|
PRPF40A | ENSG00000196504 | pre-mRNA processing factor 40 homolog A | ||
| A0A3F2YNY6 F5H578 H0YG38 H7BXZ7 H7C2N3 O75400 | ||||
| 55660 | ||||
| Spliceosome | ||||
19
|
U2AF2 | ENSG00000063244 | U2 small nuclear RNA auxiliary factor 2 | ||
| K7ELP8 K7ENG2 M0QYQ9 P26368 | ||||
| 11338 | ||||
| Spliceosome | ||||
24
|
RBM25 | ENSG00000119707 | RNA binding motif protein 25 | ||
| E9PQU5 E9PSE8 H0YE46 P49756 | ||||
| 58517 | ||||
| Spliceosome | ||||
25
|
PRPF4B | ENSG00000112739 | pre-mRNA processing factor 4B | ||
| H0YDJ3 Q13523 | ||||
| 8899 | ||||
18
|
RBM15 | ENSG00000162775 | RNA binding motif protein 15 | ||
| A0A087WWP4 A0A494C001 A0A499FJY3 Q96T37 | ||||
| 64783 | ||||
19
|
ZC3H14 | ENSG00000100722 | zinc finger CCCH-type containing 14 | ||
| A0A087WTC9 A0A3B3IT62 G3V240 G3V256 G3V2X4 G3V3R9 G3V3Y4 G3V411 G3V473 G3V4R5 G3V572 G3V5I6 H0YJ51 H0YJ87 H0YJA2 Q6PJT7 | ||||
| 79882 | ||||
15
|
PPIG | ENSG00000138398 | peptidylprolyl isomerase G | ||
| C9J679 C9JM79 C9JN15 C9JT64 E9PG73 Q13427 | ||||
| 9360 | ||||
18
|
SMARCAD1 | ENSG00000163104 | SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 | ||
| D6RAY8 F8W9M2 Q9H4L7 | ||||
| 56916 | ||||
18
|
SLTM | ENSG00000137776 | SAFB like transcription modulator | ||
| H0YKH2 H0YKU6 H0YL55 H0YLE6 H0YLW7 H0YMM0 H0YMR6 H0YMW8 H0YNF3 H7BXE3 H7C3F4 Q9NWH9 | ||||
| 79811 | ||||
19
|
EFTUD2 | ENSG00000108883 | elongation factor Tu GTP binding domain containing 2 | ||
| K7EIT3 K7EIV5 K7EJ74 K7EP67 K7EQ26 K7ERJ5 Q15029 | ||||
| 9343 | ||||
| Spliceosome | ||||
22
|
AQR | ENSG00000021776 | aquarius intron-binding spliceosomal factor | ||
| H0YH15 H0YLN9 O60306 | ||||
| 9716 | ||||
| Spliceosome | ||||
28
|
MTREX | ENSG00000039123 | Mtr4 exosome RNA helicase | ||
| D6REC7 H0Y8U3 H0YAC4 P42285 | ||||
| 23517 | ||||
| RNA degradation | ||||
5
|
PIP5K1A | ENSG00000143398 | phosphatidylinositol-4-phosphate 5-kinase type 1 alpha | ||
| A2A5X0 A6PW56 A6PW57 A6PW58 E9PSF8 Q99755 | ||||
| 8394 | ||||
| Fc gamma R-mediated phagocytosis Focal adhesion Phospholipase D signaling pathway Phosphatidylinositol signaling system | ||||
| Endocytosis Inositol phosphate metabolism | ||||
22
|
LUC7L2 | ENSG00000146963 | LUC7 like 2, pre-mRNA splicing factor | ||
| F8WEU3 Q9Y383 V9GZ75 | ||||
| 51631 | ||||
19
|
ISY1 | ENSG00000240682 | ISY1 splicing factor homolog | ||
| A8MVI5 D6RC18 H0YA89 Q9ULR0 | ||||
| 100534599 57461 | ||||
| Spliceosome | ||||
16
|
RBM7 | ENSG00000076053 | RNA binding motif protein 7 | ||
| F5GXV8 F5GY08 F5H606 F5H674 G3V1T9 J3KPD3 Q9Y580 | ||||
| 10179 | ||||
26
|
PRPF8 | ENSG00000174231 | pre-mRNA processing factor 8 | ||
| I3L0J9 I3L1T8 I3L3Z8 Q6P2Q9 | ||||
| 10594 | ||||
| Spliceosome | ||||
20
|
CTR9 | ENSG00000198730 | CTR9 homolog, Paf1/RNA polymerase II complex component | ||
| A0A2R8Y3S3 H0YCE8 Q6PD62 | ||||
| 9646 | ||||
15
|
EZH2 | ENSG00000106462 | enhancer of zeste 2 polycomb repressive complex 2 subunit | ||
| E9PDH6 G3XAL2 Q15910 | ||||
| 2146 | ||||
| Lysine degradation | ||||
6
|
TERF2 | ENSG00000132604 | telomeric repeat binding factor 2 | ||
| H3BR06 H3BR37 H3BTA7 J3KSJ9 J3KSZ6 J3KTN8 Q15554 U3KQ35 V9GYM1 | ||||
| 7014 | ||||
15
|
UPF1 | ENSG00000005007 | UPF1 RNA helicase and ATPase | ||
| Q92900 | ||||
| 5976 | ||||
| RNA transport mRNA surveillance pathway |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
- Add to current query
jSquid_subnetworks.xml | 311.91 KB | |
H.sapiens_subnetwork.tsv | 51.70 KB |