Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000157216
- single stranded DNA bin…
- LDB1
- LIM domain binding 1
- 1.000
- PPI
- LDB2
- LIM domain binding 2
- 0.999
- PPI
- SSBP2
- single stranded DNA bin…
- 0.963
- PPI
- PIN1
- peptidylprolyl cis/tran…
- 0.958
- PPI
- BANF1
- BAF nuclear assembly fa…
- 0.932
- PPI
- XRCC1
- X-ray repair cross comp…
- 0.931
- PPI
- SSBP4
- single stranded DNA bin…
- 0.930
- PPI
- SSBP1
- single stranded DNA bin…
- 0.914
- PPI
- S100A6
- S100 calcium binding pr…
- 0.883
- PPI
- EWSR1
- EWS RNA binding protein…
- 0.867
- PPI
- LEMD2
- LEM domain nuclear enve…
- 0.840
- PPI
- CUX1
- cut like homeobox 1
- 0.821
- PPI
- LMO4
- LIM domain only 4
- 0.750
- PPI
- RLIM
- ring finger protein, LI…
- 0.616
- PPI
- TMPO
- thymopoietin
- 0.598
- PPI
- LMO1
- LIM domain only 1
- 0.547
- PPI
- R3HDM2
- R3H domain containing 2
- 0.528
- Metabolic
- RRP1B
- ribosomal RNA processin…
- 0.503
- Complex
- TAL1
- TAL bHLH transcription …
- 0.426
- Complex
- MTA1
- metastasis associated 1
- 0.412
- Complex
Subnetwork gene interactions
ENSG00000157216
single stranded DNA binding protein 3
FunCoup
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- Ensembl
- UniProt
- NCBI
CUX1
cut like homeobox 1
FunCoup
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- Ensembl
- UniProt
- NCBI
TMPO
thymopoietin
FunCoup
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- Ensembl
- UniProt
- NCBI
XRCC1
X-ray repair cross complementing 1
FunCoup
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- Ensembl
- UniProt
- NCBI
RRP1B
ribosomal RNA processing 1B
FunCoup
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- Ensembl
- UniProt
- NCBI
TAL1
TAL bHLH transcription factor 1, erythroid differentiation factor
FunCoup
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- Ensembl
- UniProt
- NCBI
LDB1
LIM domain binding 1
FunCoup
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- Add to current query
- Ensembl
- UniProt
- NCBI
LEMD2
LEM domain nuclear envelope protein 2
FunCoup
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- Ensembl
- UniProt
- NCBI
EWSR1
EWS RNA binding protein 1
FunCoup
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- Ensembl
- UniProt
- NCBI
MTA1
metastasis associated 1
FunCoup
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- Ensembl
- UniProt
- NCBI
LMO4
LIM domain only 4
FunCoup
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- Ensembl
- UniProt
- NCBI
SSBP1
single stranded DNA binding protein 1
FunCoup
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- Ensembl
- UniProt
- NCBI
SSBP2
single stranded DNA binding protein 2
FunCoup
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- Ensembl
- UniProt
- NCBI
PIN1
peptidylprolyl cis/trans isomerase, NIMA-interacting 1
FunCoup
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- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LMO1
LIM domain only 1
FunCoup
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
S100A6
S100 calcium binding protein A6
FunCoup
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
LDB2
LIM domain binding 2
FunCoup
- Use as query
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- Ensembl
- UniProt
- NCBI
RLIM
ring finger protein, LIM domain interacting
FunCoup
- Use as query
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- Add to current query
- Ensembl
- UniProt
- NCBI
BANF1
BAF nuclear assembly factor 1
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SSBP4
single stranded DNA binding protein 4
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
R3HDM2
R3H domain containing 2
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Query genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
20
|
ENSG00000157216 | ENSG00000157216 | single stranded DNA binding protein 3 | ||
| A0A087WVT6 E9PK49 Q5T863 Q9BWW4 Q9NW25 | ||||
| 23648 |
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
12
|
CUX1 | ENSG00000257923 | cut like homeobox 1 | ||
| A0A2R8Y852 A0A2R8Y8D0 A0A2R8YDI1 P39880 Q13948 | ||||
| 1523 | ||||
12
|
TMPO | ENSG00000120802 | thymopoietin | ||
| G5E972 H0YJH7 P42166 P42167 | ||||
| 7112 | ||||
15
|
XRCC1 | ENSG00000073050 | X-ray repair cross complementing 1 | ||
| F5H8D7 M0QYS5 M0QZ96 M0R0D2 M0R1U8 P18887 | ||||
| 7515 | ||||
| Base excision repair | ||||
5
|
RRP1B | ENSG00000160208 | ribosomal RNA processing 1B | ||
| Q14684 | ||||
| 23076 | ||||
4
|
TAL1 | ENSG00000162367 | TAL bHLH transcription factor 1, erythroid differentiation factor | ||
| P17542 | ||||
| 6886 | ||||
14
|
LDB1 | ENSG00000198728 | LIM domain binding 1 | ||
| Q86U70 | ||||
| 8861 | ||||
12
|
LEMD2 | ENSG00000161904 | LEM domain nuclear envelope protein 2 | ||
| D6R958 D6RBV0 H0Y8H8 H0Y9B7 H7C2Z0 Q8NC56 | ||||
| 221496 | ||||
7
|
EWSR1 | ENSG00000182944 | EWS RNA binding protein 1 | ||
| A0A0D9SFL3 B0QYJ3 B0QYJ4 B0QYJ5 B0QYJ6 B0QYJ7 B0QYK0 C9JGE3 F8WC90 H7BY36 Q01844 | ||||
| 2130 | ||||
5
|
MTA1 | ENSG00000182979 | metastasis associated 1 | ||
| E7ESY4 F8W9Y9 H0Y4T7 H0YIT0 H7C3F3 Q13330 | ||||
| 9112 | ||||
14
|
LMO4 | ENSG00000143013 | LIM domain only 4 | ||
| P61968 | ||||
| 8543 | ||||
14
|
SSBP1 | ENSG00000106028 | single stranded DNA binding protein 1 | ||
| C9J8J0 C9K0U8 E7EUY5 Q04837 | ||||
| 6742 | ||||
| DNA replication Homologous recombination Mismatch repair | ||||
16
|
SSBP2 | ENSG00000145687 | single stranded DNA binding protein 2 | ||
| A0A087X159 D6RAC5 H0Y9M5 H0Y9V4 P81877 | ||||
| 23635 | ||||
5
|
PIN1 | ENSG00000127445 | peptidylprolyl cis/trans isomerase, NIMA-interacting 1 | ||
| K7EMU7 K7EN45 K7EP26 Q13526 | ||||
| 5300 | ||||
| RIG-I-like receptor signaling pathway | ||||
11
|
LMO1 | ENSG00000166407 | LIM domain only 1 | ||
| E9PK83 P25800 | ||||
| 4004 | ||||
12
|
S100A6 | ENSG00000197956 | S100 calcium binding protein A6 | ||
| P06703 R4GN98 | ||||
| 6277 | ||||
4
|
LDB2 | ENSG00000169744 | LIM domain binding 2 | ||
| D6RAT1 E7EX95 E9PFI4 E9PGU0 G5E9Y7 H0YA09 O43679 | ||||
| 9079 | ||||
3
|
RLIM | ENSG00000131263 | ring finger protein, LIM domain interacting | ||
| Q9NVW2 | ||||
| 51132 | ||||
15
|
BANF1 | ENSG00000175334 | BAF nuclear assembly factor 1 | ||
| E9PJJ8 O75531 | ||||
| 8815 | ||||
13
|
SSBP4 | ENSG00000130511 | single stranded DNA binding protein 4 | ||
| M0R338 Q9BWG4 U3KPY3 U3KQ46 U3KQ98 U3KQN6 U3KQP2 V9GYB2 | ||||
| 170463 | ||||
1
|
R3HDM2 | ENSG00000179912 | R3H domain containing 2 | ||
| A0A0U1RRA6 B5MCG9 B5MCU0 C9J7N6 H0YIX9 H7C0E9 Q9Y2K5 | ||||
| 22864 |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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Copied subnetwork genes to clipboard
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jSquid_subnetworks.xml | 177.18 KB | |
H.sapiens_subnetwork.tsv | 15.54 KB |