Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000156990
- RNA pseudouridine synth…
- MRPL4
- mitochondrial ribosomal…
- 0.982
- PPI
- YARS2
- tyrosyl-tRNA synthetase…
- 0.978
- PPI
- HSPD1
- heat shock protein fami…
- 0.946
- PPI
- MRPL58
- mitochondrial ribosomal…
- 0.943
- PPI
- CBWD1
- COBW domain containing 1
- 0.889
- PPI
- ZNRD2
- zinc ribbon domain cont…
- 0.851
- PPI
- MRPL50
- mitochondrial ribosomal…
- 0.821
- PPI
- MRPL39
- mitochondrial ribosomal…
- 0.805
- PPI
- RCC1L
- RCC1 like
- 0.731
- PPI
- NDUFAF7
- NADH:ubiquinone oxidore…
- 0.715
- PPI
- RBM42
- RNA binding motif prote…
- 0.650
- PPI
- NIT1
- nitrilase 1
- 0.606
- PPI
- ISCA2
- iron-sulfur cluster ass…
- 0.529
- Metabolic
- NUP107
- nucleoporin 107
- 0.511
- PPI
- FBXW11
- F-box and WD repeat dom…
- 0.478
- PPI
- CLPP
- caseinolytic mitochondr…
- 0.469
- Metabolic
Subnetwork gene interactions
ENSG00000156990
RNA pseudouridine synthase D3
FunCoup
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- Ensembl
- UniProt
- NCBI
HSPD1
heat shock protein family D (Hsp60) member 1
FunCoup
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- Ensembl
- UniProt
- NCBI
MRPL4
mitochondrial ribosomal protein L4
FunCoup
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- Ensembl
- UniProt
- NCBI
MRPL58
mitochondrial ribosomal protein L58
FunCoup
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- Ensembl
- UniProt
- NCBI
MRPL50
mitochondrial ribosomal protein L50
FunCoup
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- Ensembl
- UniProt
- NCBI
ISCA2
iron-sulfur cluster assembly 2
FunCoup
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- Ensembl
- UniProt
- NCBI
MRPL39
mitochondrial ribosomal protein L39
FunCoup
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- Ensembl
- UniProt
- NCBI
YARS2
tyrosyl-tRNA synthetase 2
FunCoup
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- Ensembl
- UniProt
- NCBI
NUP107
nucleoporin 107
FunCoup
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- Ensembl
- UniProt
- NCBI
RBM42
RNA binding motif protein 42
FunCoup
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- Ensembl
- UniProt
- NCBI
CLPP
caseinolytic mitochondrial matrix peptidase proteolytic subunit
FunCoup
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- Ensembl
- UniProt
- NCBI
RCC1L
RCC1 like
FunCoup
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- Ensembl
- UniProt
- NCBI
ZNRD2
zinc ribbon domain containing 2
FunCoup
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- Ensembl
- UniProt
- NCBI
NIT1
nitrilase 1
FunCoup
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- Ensembl
- UniProt
- NCBI
CBWD1
COBW domain containing 1
FunCoup
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- Add to current query
- Ensembl
- UniProt
- A0A087WTC0
- A0A087WU37
- A0A087WVU7
- A0A087WWK6
- A0A087WY70
- A0A087WZQ3
- A0A087X0Y9
- A0A087X140
- A0A087X1Y1
- A0A0B4J1T6
- F2Z2T4
- Q9BRT8
- NCBI
FBXW11
F-box and WD repeat domain containing 11
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Query genes
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
8
|
HSPD1 | ENSG00000144381 | heat shock protein family D (Hsp60) member 1 | ||
| C9J0S9 C9JCQ4 C9JL19 C9JL25 E7ESH4 E7EXB4 F8WBB1 P10809 | ||||
| 3329 | ||||
| RNA degradation | ||||
11
|
MRPL4 | ENSG00000105364 | mitochondrial ribosomal protein L4 | ||
| K7EJ73 K7EKI4 K7ELF1 K7ELQ0 K7ES61 Q9BYD3 X6RAY8 | ||||
| 51073 | ||||
| Ribosome | ||||
9
|
MRPL58 | ENSG00000167862 | mitochondrial ribosomal protein L58 | ||
| J3KS15 J3QRF8 Q14197 | ||||
| 3396 | ||||
5
|
MRPL50 | ENSG00000136897 | mitochondrial ribosomal protein L50 | ||
| Q8N5N7 | ||||
| 54534 | ||||
5
|
ISCA2 | ENSG00000165898 | iron-sulfur cluster assembly 2 | ||
| J3QSS7 Q86U28 | ||||
| 122961 | ||||
7
|
MRPL39 | ENSG00000154719 | mitochondrial ribosomal protein L39 | ||
| C9JG87 Q9NYK5 | ||||
| 54148 | ||||
10
|
YARS2 | ENSG00000139131 | tyrosyl-tRNA synthetase 2 | ||
| H0YHS6 Q9Y2Z4 | ||||
| 51067 | ||||
| Aminoacyl-tRNA biosynthesis | ||||
4
|
NUP107 | ENSG00000111581 | nucleoporin 107 | ||
| F5GY77 G3V1T4 H0YG15 P57740 | ||||
| 57122 | ||||
| RNA transport | ||||
3
|
RBM42 | ENSG00000126254 | RNA binding motif protein 42 | ||
| K7EML2 K7EP90 K7EQ03 K7ER08 Q9BTD8 | ||||
| 79171 | ||||
6
|
CLPP | ENSG00000125656 | caseinolytic mitochondrial matrix peptidase proteolytic subunit | ||
| A0A2R8YEF5 M0QXE9 M0QYV5 M0R208 Q16740 | ||||
| 8192 | ||||
5
|
RCC1L | ENSG00000274523 | RCC1 like | ||
| A0A087WT38 Q96I51 | ||||
| 81554 | ||||
3
|
ZNRD2 | ENSG00000173465 | zinc ribbon domain containing 2 | ||
| E9PK41 E9PN57 G3V1B8 H0YEB6 H0YEK1 O60232 | ||||
| 10534 | ||||
3
|
NIT1 | ENSG00000158793 | nitrilase 1 | ||
| Q86X76 | ||||
| 4817 | ||||
5
|
CBWD1 | ENSG00000172785 | COBW domain containing 1 | ||
| A0A087WTC0 A0A087WU37 A0A087WVU7 A0A087WWK6 A0A087WY70 A0A087WZQ3 A0A087X0Y9 A0A087X140 A0A087X1Y1 A0A0B4J1T6 F2Z2T4 Q9BRT8 | ||||
| 55871 | ||||
1
|
FBXW11 | ENSG00000072803 | F-box and WD repeat domain containing 11 | ||
| E5RG78 E5RGC1 E5RH92 Q9UKB1 | ||||
| 23291 | ||||
| Oocyte meiosis Wnt signaling pathway Hedgehog signaling pathway Hippo signaling pathway | ||||
| Ubiquitin mediated proteolysis | ||||
3
|
NDUFAF7 | ENSG00000003509 | NADH:ubiquinone oxidoreductase complex assembly factor 7 | ||
| B4E0W7 C9J236 C9JEL7 C9JP36 C9JS27 H7C3N5 Q7L592 | ||||
| 55471 |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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Copied subnetwork genes to clipboard
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jSquid_subnetworks.xml | 145.58 KB | |
H.sapiens_subnetwork.tsv | 8.84 KB |