- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000149016
- terminal uridylyl trans…
- CSTF2
- cleavage stimulation fa…
- 1.000
- PPI
- CPSF1
- cleavage and polyadenyl…
- 1.000
- PPI
- PRPF31
- pre-mRNA processing fac…
- 0.999
- PPI
- LARP7
- La ribonucleoprotein 7,…
- 0.999
- PPI
- PRPF3
- pre-mRNA processing fac…
- 0.998
- PPI
- PPIH
- peptidylprolyl isomeras…
- 0.998
- Complex
- PRPF4
- pre-mRNA processing fac…
- 0.998
- Complex
- SART3
- spliceosome associated …
- 0.997
- PPI
- LSM7
- LSM7 homolog, U6 small …
- 0.997
- Complex
- LSM4
- LSM4 homolog, U6 small …
- 0.996
- Complex
- PIP5K1A
- phosphatidylinositol-4-…
- 0.996
- PPI
- SYMPK
- symplekin
- 0.996
- PPI
- LSM5
- LSM5 homolog, U6 small …
- 0.996
- PPI
- LSM6
- LSM6 homolog, U6 small …
- 0.996
- PPI
- LSM8
- LSM8 homolog, U6 small …
- 0.994
- Complex
- SNRPG
- small nuclear ribonucle…
- 0.992
- PPI
- CPSF2
- cleavage and polyadenyl…
- 0.992
- PPI
- LSM2
- LSM2 homolog, U6 small …
- 0.992
- Complex
- EIF4E2
- eukaryotic translation …
- 0.990
- Complex
- PAPOLA
- poly(A) polymerase alpha
- 0.986
- PPI
- PLRG1
- pleiotropic regulator 1
- 0.984
- Metabolic
- CPSF3
- cleavage and polyadenyl…
- 0.982
- PPI
- MRE11
- MRE11 homolog, double s…
- 0.978
- Metabolic
- SNRPF
- small nuclear ribonucle…
- 0.974
- PPI
- UBA1
- ubiquitin like modifier…
- 0.972
- Metabolic
- ADSL
- adenylosuccinate lyase
- 0.969
- Complex
- WDHD1
- WD repeat and HMG-box D…
- 0.967
- Metabolic
- SF3B2
- splicing factor 3b subu…
- 0.960
- Metabolic
- MTREX
- Mtr4 exosome RNA helica…
- 0.957
- Metabolic
- RBM10
- RNA binding motif prote…
- 0.949
- Metabolic
ENSG00000149016
terminal uridylyl transferase 1, U6 snRNA-specific
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SYMPK
symplekin
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
MTREX
Mtr4 exosome RNA helicase
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ADSL
adenylosuccinate lyase
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A096LNT0
- A0A096LNY4
- A0A096LNY5
- A0A096LNY6
- A0A096LP72
- A0A096LP76
- A0A096LP92
- A0A096LPA2
- A0A0A6YY92
- A0A1B0GTG9
- A0A1B0GTJ7
- A0A1B0GWF8
- A0A1B0GWJ0
- B4DEP1
- P30566
- V9GY96
- NCBI
LSM2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
WDHD1
WD repeat and HMG-box DNA binding protein 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LARP7
La ribonucleoprotein 7, transcriptional regulator
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RBM10
RNA binding motif protein 10
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SART3
spliceosome associated factor 3, U4/U6 recycling protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPF
small nuclear ribonucleoprotein polypeptide F
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PLRG1
pleiotropic regulator 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF31
pre-mRNA processing factor 31
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CPSF2
cleavage and polyadenylation specific factor 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EIF4E2
eukaryotic translation initiation factor 4E family member 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CPSF3
cleavage and polyadenylation specific factor 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF3
pre-mRNA processing factor 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CSTF2
cleavage stimulation factor subunit 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CPSF1
cleavage and polyadenylation specific factor 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SF3B2
splicing factor 3b subunit 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF4
pre-mRNA processing factor 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PAPOLA
poly(A) polymerase alpha
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPG
small nuclear ribonucleoprotein polypeptide G
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PIP5K1A
phosphatidylinositol-4-phosphate 5-kinase type 1 alpha
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
MRE11
MRE11 homolog, double strand break repair nuclease
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PPIH
peptidylprolyl isomerase H
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM8
LSM8 homolog, U6 small nuclear RNA associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
18
|
SYMPK | ENSG00000125755 | symplekin | ||
| A0A087WUE9 M0QXP5 M0R033 M0R039 M0R180 M0R1C2 M0R3C7 Q92797 | ||||
| 8189 | ||||
| Tight junction | ||||
| mRNA surveillance pathway | ||||
28
|
MTREX | ENSG00000039123 | Mtr4 exosome RNA helicase | ||
| D6REC7 H0Y8U3 H0YAC4 P42285 | ||||
| 23517 | ||||
| RNA degradation | ||||
16
|
ADSL | ENSG00000239900 | adenylosuccinate lyase | ||
| A0A096LNT0 A0A096LNY4 A0A096LNY5 A0A096LNY6 A0A096LP72 A0A096LP76 A0A096LP92 A0A096LPA2 A0A0A6YY92 A0A1B0GTG9 A0A1B0GTJ7 A0A1B0GWF8 A0A1B0GWJ0 B4DEP1 P30566 V9GY96 | ||||
| 158 | ||||
| Alanine, aspartate and glutamate metabolism Purine metabolism | ||||
26
|
LSM2 | ENSG00000204392 | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| Q9Y333 | ||||
| 57819 | ||||
| RNA degradation Spliceosome | ||||
23
|
LSM5 | ENSG00000106355 | LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| B8ZZF8 F8W8Y8 Q9Y4Y9 | ||||
| 23658 | ||||
| RNA degradation Spliceosome | ||||
24
|
WDHD1 | ENSG00000198554 | WD repeat and HMG-box DNA binding protein 1 | ||
| C9JYB3 H3BSQ1 O75717 | ||||
| 11169 | ||||
19
|
LARP7 | ENSG00000174720 | La ribonucleoprotein 7, transcriptional regulator | ||
| D6R9Z6 D6RAF3 D6RBH8 D6RF22 D6RF49 D6RFF0 H0YA82 Q4G0J3 | ||||
| 51574 | ||||
25
|
RBM10 | ENSG00000182872 | RNA binding motif protein 10 | ||
| P98175 | ||||
| 8241 | ||||
24
|
SART3 | ENSG00000075856 | spliceosome associated factor 3, U4/U6 recycling protein | ||
| A0A494C0L2 A0A499FI31 F8VVK9 F8VZM2 F8W667 H0YHU8 Q15020 | ||||
| 9733 | ||||
23
|
LSM4 | ENSG00000130520 | LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| M0QXB0 Q9Y4Z0 U3KQK1 V9GZ56 | ||||
| 25804 | ||||
| RNA degradation Spliceosome | ||||
25
|
SNRPF | ENSG00000139343 | small nuclear ribonucleoprotein polypeptide F | ||
| A0A0B4J254 F8W0W6 P62306 | ||||
| 6636 | ||||
| Spliceosome | ||||
26
|
PLRG1 | ENSG00000171566 | pleiotropic regulator 1 | ||
| B7Z982 D6RA26 D6RE04 H0YA24 H0YAA2 O43660 | ||||
| 5356 | ||||
| Spliceosome | ||||
26
|
LSM7 | ENSG00000130332 | LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| A0A087X2I5 K7EML7 K7ENY5 Q9UK45 | ||||
| 51690 | ||||
| RNA degradation Spliceosome | ||||
25
|
PRPF31 | ENSG00000105618 | pre-mRNA processing factor 31 | ||
| E7EN72 E7ESX0 E7EU94 E7EVX8 Q8WWY3 | ||||
| 26121 | ||||
| Spliceosome | ||||
25
|
CPSF2 | ENSG00000165934 | cleavage and polyadenylation specific factor 2 | ||
| G3V3T7 G3V5T3 H0YJF4 Q9P2I0 | ||||
| 53981 | ||||
| mRNA surveillance pathway | ||||
15
|
EIF4E2 | ENSG00000135930 | eukaryotic translation initiation factor 4E family member 2 | ||
| B4E1E4 B8ZZ50 B8ZZL3 B9A023 B9A044 C9JEL3 H7BZH2 O60573 | ||||
| 9470 | ||||
| HIF-1 signaling pathway PI3K-Akt signaling pathway mTOR signaling pathway Insulin signaling pathway | ||||
| RNA transport | ||||
18
|
CPSF3 | ENSG00000119203 | cleavage and polyadenylation specific factor 3 | ||
| C9JZH6 G5E9W3 Q9UKF6 | ||||
| 51692 | ||||
| mRNA surveillance pathway | ||||
28
|
PRPF3 | ENSG00000117360 | pre-mRNA processing factor 3 | ||
| O43395 | ||||
| 9129 | ||||
| Spliceosome | ||||
25
|
CSTF2 | ENSG00000101811 | cleavage stimulation factor subunit 2 | ||
| A0A0A0MT56 E7EWR4 E9PID8 P33240 | ||||
| 1478 | ||||
| mRNA surveillance pathway | ||||
22
|
CPSF1 | ENSG00000071894 | cleavage and polyadenylation specific factor 1 | ||
| A0A087WTV4 A0A087X101 E9PIM1 Q10570 | ||||
| 29894 | ||||
| mRNA surveillance pathway | ||||
28
|
SF3B2 | ENSG00000087365 | splicing factor 3b subunit 2 | ||
| E9PIL8 E9PJ04 E9PJT3 E9PPJ0 H0YCG1 H0YEX5 Q13435 | ||||
| 10992 | ||||
| Spliceosome | ||||
27
|
PRPF4 | ENSG00000136875 | pre-mRNA processing factor 4 | ||
| O43172 | ||||
| 9128 | ||||
| Spliceosome | ||||
26
|
LSM6 | ENSG00000164167 | LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| P62312 | ||||
| 11157 | ||||
| RNA degradation Spliceosome | ||||
10
|
PAPOLA | ENSG00000090060 | poly(A) polymerase alpha | ||
| A0A0C4DGK1 G3V3I9 G3V457 G3XAH6 H0YJ00 H0YJL4 P51003 | ||||
| 10914 | ||||
| mRNA surveillance pathway | ||||
24
|
SNRPG | ENSG00000143977 | small nuclear ribonucleoprotein polypeptide G | ||
| C9JVQ0 F5H013 P62308 Q49AN9 | ||||
| 6637 | ||||
| Spliceosome | ||||
8
|
PIP5K1A | ENSG00000143398 | phosphatidylinositol-4-phosphate 5-kinase type 1 alpha | ||
| A2A5X0 A6PW56 A6PW57 A6PW58 E9PSF8 Q99755 | ||||
| 8394 | ||||
| Fc gamma R-mediated phagocytosis Focal adhesion Phospholipase D signaling pathway Phosphatidylinositol signaling system | ||||
| Endocytosis Inositol phosphate metabolism | ||||
21
|
MRE11 | ENSG00000020922 | MRE11 homolog, double strand break repair nuclease | ||
| F5GXT0 F5H256 F5H742 F8W7U8 P49959 | ||||
| 4361 | ||||
| Non-homologous end-joining Homologous recombination | ||||
25
|
PPIH | ENSG00000171960 | peptidylprolyl isomerase H | ||
| A6NM32 C9JAN8 C9JQD4 H0YEL5 O43447 | ||||
| 10465 | ||||
| Spliceosome | ||||
26
|
LSM8 | ENSG00000128534 | LSM8 homolog, U6 small nuclear RNA associated | ||
| C9JIZ0 C9JNV3 F2Z2Y6 O95777 | ||||
| 51691 | ||||
| RNA degradation Spliceosome | ||||
22
|
UBA1 | ENSG00000130985 | ubiquitin like modifier activating enzyme 1 | ||
| P22314 Q5JRR6 Q5JRR9 Q5JRS0 Q5JRS1 Q5JRS2 Q5JRS3 | ||||
| 7317 | ||||
| Ubiquitin mediated proteolysis |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
- Add to current query
jSquid_subnetworks.xml | 322.29 KB | |
H.sapiens_subnetwork.tsv | 66.92 KB |