Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000148158
- sorting nexin family me…
- KHDRBS1
- KH RNA binding domain c…
- 0.976
- PPI
- VAMP4
- vesicle associated memb…
- 0.951
- PPI
- ADAM15
- ADAM metallopeptidase d…
- 0.944
- PPI
- CLIP2
- CAP-Gly domain containi…
- 0.865
- PPI
- VAMP2
- vesicle associated memb…
- 0.769
- PPI
- SUPT5H
- SPT5 homolog, DSIF elon…
- 0.760
- Complex
- ENSG00000263620
- novel protein
- 0.742
- PPI
- CHEK1
- checkpoint kinase 1
- 0.681
- Metabolic
- ATP6V1B2
- ATPase H+ transporting …
- 0.620
- Complex
- TUBB
- tubulin beta class I
- 0.593
- Complex
- COG3
- component of oligomeric…
- 0.551
- Complex
- SUGT1
- SGT1 homolog, MIS12 kin…
- 0.482
- PPI
- VAMP3
- vesicle associated memb…
- 0.441
- PPI
- CLIP1
- CAP-Gly domain containi…
- 0.441
- Complex
- DLAT
- dihydrolipoamide S-acet…
- 0.438
- Complex
- COG6
- component of oligomeric…
- 0.406
- Complex
- FGFR1OP
- centrosomal protein 43
- 0.404
- PPI
Subnetwork gene interactions
ENSG00000148158
sorting nexin family member 30
FunCoup
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- Ensembl
- UniProt
- NCBI
ATP6V1B2
ATPase H+ transporting V1 subunit B2
FunCoup
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- Ensembl
- UniProt
- NCBI
SUPT5H
SPT5 homolog, DSIF elongation factor subunit
FunCoup
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- Ensembl
- UniProt
- NCBI
FGFR1OP
centrosomal protein 43
FunCoup
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- Ensembl
- UniProt
- NCBI
CLIP1
CAP-Gly domain containing linker protein 1
FunCoup
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- Ensembl
- UniProt
- NCBI
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1
FunCoup
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- Ensembl
- UniProt
- NCBI
ADAM15
ADAM metallopeptidase domain 15
FunCoup
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- Ensembl
- UniProt
- NCBI
VAMP3
vesicle associated membrane protein 3
FunCoup
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- Ensembl
- UniProt
- NCBI
VAMP4
vesicle associated membrane protein 4
FunCoup
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- Ensembl
- UniProt
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COG6
component of oligomeric golgi complex 6
FunCoup
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- Ensembl
- UniProt
- NCBI
TUBB
tubulin beta class I
FunCoup
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- Ensembl
- UniProt
- NCBI
COG3
component of oligomeric golgi complex 3
FunCoup
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- Ensembl
- UniProt
- NCBI
CLIP2
CAP-Gly domain containing linker protein 2
FunCoup
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- Ensembl
- UniProt
- NCBI
DLAT
dihydrolipoamide S-acetyltransferase
FunCoup
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- Ensembl
- UniProt
- NCBI
CHEK1
checkpoint kinase 1
FunCoup
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- Add to current query
- Ensembl
- UniProt
- NCBI
SUGT1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone
FunCoup
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- Ensembl
- UniProt
- NCBI
VAMP2
vesicle associated membrane protein 2
FunCoup
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- Ensembl
- UniProt
- NCBI
ENSG00000263620
novel protein
FunCoup
- Use as query
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- Ensembl
- UniProt
- NCBI
Query genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
17
|
ENSG00000148158 | ENSG00000148158 | sorting nexin family member 30 | ||
| H0Y496 Q5VWJ9 | ||||
| 401548 |
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
10
|
ATP6V1B2 | ENSG00000147416 | ATPase H+ transporting V1 subunit B2 | ||
| E5RGH6 H0YAT8 H0YC04 H0YC45 P21281 | ||||
| 526 | ||||
| Synaptic vesicle cycle mTOR signaling pathway | ||||
| Oxidative phosphorylation Phagosome | ||||
6
|
SUPT5H | ENSG00000196235 | SPT5 homolog, DSIF elongation factor subunit | ||
| M0QYL9 M0R105 M0R2M5 O00267 | ||||
| 6829 | ||||
2
|
FGFR1OP | ENSG00000213066 | centrosomal protein 43 | ||
| A0A087WV25 O95684 | ||||
| 11116 | ||||
4
|
CLIP1 | ENSG00000130779 | CAP-Gly domain containing linker protein 1 | ||
| A0A3B3IS27 A0A3B3ISJ8 A0A3B3ITA2 F5H0N7 F5H1T5 F5H270 F5H367 F5H6A0 J3KP58 P30622 | ||||
| 6249 | ||||
| mTOR signaling pathway | ||||
2
|
KHDRBS1 | ENSG00000121774 | KH RNA binding domain containing, signal transduction associated 1 | ||
| Q07666 | ||||
| 10657 | ||||
2
|
ADAM15 | ENSG00000143537 | ADAM metallopeptidase domain 15 | ||
| Q13444 | ||||
| 8751 | ||||
6
|
VAMP3 | ENSG00000049245 | vesicle associated membrane protein 3 | ||
| K7EKX0 Q15836 | ||||
| 9341 | ||||
| SNARE interactions in vesicular transport | ||||
| Phagosome SNARE interactions in vesicular transport | ||||
4
|
VAMP4 | ENSG00000117533 | vesicle associated membrane protein 4 | ||
| O75379 | ||||
| 8674 | ||||
| SNARE interactions in vesicular transport | ||||
| SNARE interactions in vesicular transport | ||||
6
|
COG6 | ENSG00000133103 | component of oligomeric golgi complex 6 | ||
| F5GX38 F5GX76 H0YGX8 Q9Y2V7 | ||||
| 57511 | ||||
12
|
TUBB | ENSG00000196230 | tubulin beta class I | ||
| P07437 Q5JP53 Q5ST81 | ||||
| 203068 | ||||
| Gap junction | ||||
| Phagosome | ||||
4
|
COG3 | ENSG00000136152 | component of oligomeric golgi complex 3 | ||
| A0A087WTH9 A0A087WYY9 Q96JB2 | ||||
| 83548 | ||||
3
|
CLIP2 | ENSG00000106665 | CAP-Gly domain containing linker protein 2 | ||
| H7C4L6 H7C5H8 Q9UDT6 | ||||
| 7461 | ||||
6
|
DLAT | ENSG00000150768 | dihydrolipoamide S-acetyltransferase | ||
| E9PEJ4 E9PKC7 H0YDD4 P10515 | ||||
| 1737 | ||||
| Pyruvate metabolism Glycolysis / Gluconeogenesis Citrate cycle (TCA cycle) Carbon metabolism | ||||
3
|
CHEK1 | ENSG00000149554 | checkpoint kinase 1 | ||
| A0A087WT52 E7EPP6 E9PJI4 E9PKQ3 E9PPA5 E9PQW7 E9PRU7 O14757 | ||||
| 1111 | ||||
| p53 signaling pathway Cell cycle | ||||
3
|
SUGT1 | ENSG00000165416 | SGT1 homolog, MIS12 kinetochore complex assembly cochaperone | ||
| Q9Y2Z0 | ||||
| 10910 | ||||
| NOD-like receptor signaling pathway | ||||
4
|
VAMP2 | ENSG00000220205 | vesicle associated membrane protein 2 | ||
| F8WCA0 J3QRU4 K7ENK9 P63027 | ||||
| 6844 | ||||
| Synaptic vesicle cycle SNARE interactions in vesicular transport | ||||
| SNARE interactions in vesicular transport | ||||
2
|
ENSG00000263620 | ENSG00000263620 | novel protein | ||
| L7N2F9 |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
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Copied subnetwork genes to clipboard
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jSquid_subnetworks.xml | 144.15 KB | |
H.sapiens_subnetwork.tsv | 8.29 KB |