Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000143028
- synaptophysin like 2
- VAMP3
- vesicle associated memb…
- 0.767
- PPI
- SYNGR2
- synaptogyrin 2
- 0.569
- PPI
- RAB43
- RAB43, member RAS oncog…
- 0.486
- Metabolic
Subnetwork gene interactions
ENSG00000143028
synaptophysin like 2
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
VAMP3
vesicle associated membrane protein 3
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SYNGR2
synaptogyrin 2
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RAB43
RAB43, member RAS oncogene family
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Query genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
3
|
ENSG00000143028 | ENSG00000143028 | synaptophysin like 2 | ||
| Q5VXT5 | ||||
| 284612 |
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
1
|
VAMP3 | ENSG00000049245 | vesicle associated membrane protein 3 | ||
| K7EKX0 Q15836 | ||||
| 9341 | ||||
| SNARE interactions in vesicular transport | ||||
| Phagosome SNARE interactions in vesicular transport | ||||
1
|
SYNGR2 | ENSG00000108639 | synaptogyrin 2 | ||
| K7EJ35 K7ELD9 K7ELS8 K7ENG9 O43760 | ||||
| 9144 | ||||
1
|
RAB43 | ENSG00000172780 | RAB43, member RAS oncogene family | ||
| C9JFM7 Q86YS6 | ||||
| 339122 |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
Copied subnetwork genes to clipboard
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- Add to current query
jSquid_subnetworks.xml | 76.16 KB | |
H.sapiens_subnetwork.tsv | 914 Bytes |