- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000138668
- heterogeneous nuclear r…
- ELAVL1
- ELAV like RNA binding p…
- 1.000
- PPI
- HNRNPK
- heterogeneous nuclear r…
- 1.000
- PPI
- KHSRP
- KH-type splicing regula…
- 1.000
- PPI
- EED
- embryonic ectoderm deve…
- 1.000
- Complex
- SYNCRIP
- synaptotagmin binding c…
- 1.000
- PPI
- PTBP1
- polypyrimidine tract bi…
- 1.000
- PPI
- ALYREF
- Aly/REF export factor
- 1.000
- Complex
- SF3B4
- splicing factor 3b subu…
- 1.000
- PPI
- PABPC1
- poly(A) binding protein…
- 1.000
- PPI
- PCBP2
- poly(rC) binding protei…
- 1.000
- PPI
- SUB1
- SUB1 regulator of trans…
- 1.000
- Complex
- HNRNPR
- heterogeneous nuclear r…
- 1.000
- Complex
- NONO
- non-POU domain containi…
- 1.000
- PPI
- HNRNPH3
- heterogeneous nuclear r…
- 1.000
- PPI
- EIF4A3
- eukaryotic translation …
- 0.999
- Complex
- SFPQ
- splicing factor proline…
- 0.999
- Metabolic
- SAFB
- scaffold attachment fac…
- 0.999
- PPI
- SSB
- small RNA binding exonu…
- 0.999
- Complex
- HNRNPAB
- heterogeneous nuclear r…
- 0.999
- PPI
- HIRA
- histone cell cycle regu…
- 0.999
- PPI
- SREK1
- splicing regulatory glu…
- 0.999
- PPI
- EXOSC2
- exosome component 2
- 0.998
- PPI
- EXOSC9
- exosome component 9
- 0.998
- PPI
- SMARCB1
- SWI/SNF related, matrix…
- 0.998
- PPI
- NPM1
- nucleophosmin 1
- 0.998
- Complex
- BANF1
- BAF nuclear assembly fa…
- 0.997
- PPI
- HNRNPA2B1
- heterogeneous nuclear r…
- 0.997
- Complex
- DDX5
- DEAD-box helicase 5
- 0.997
- Metabolic
- PRDX3
- peroxiredoxin 3
- 0.996
- PPI
- CDK9
- cyclin dependent kinase…
- 0.996
- PPI
ENSG00000138668
heterogeneous nuclear ribonucleoprotein D
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDX5
DEAD-box helicase 5
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A0G2JLI4
- J3KRX8
- J3KRZ1
- J3KTA4
- J3KTQ4
- J3QKN9
- J3QLG9
- J3QR02
- J3QR62
- J3QRN5
- J3QRQ7
- J3QS79
- J3QS97
- J3QSF1
- K7EKV0
- P17844
- X6RLV5
- NCBI
SF3B4
splicing factor 3b subunit 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SFPQ
splicing factor proline and glutamine rich
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SAFB
scaffold attachment factor B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PTBP1
polypyrimidine tract binding protein 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A087WTS6
- A0A087WU68
- A0A087WUW5
- A0A0D9SF20
- A0A0U1RRM4
- A6NLN1
- K7EK45
- K7EKJ7
- K7EKX4
- K7ELW5
- K7ES59
- P26599
- NCBI
HIRA
histone cell cycle regulator
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- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
KHSRP
KH-type splicing regulatory protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EED
embryonic ectoderm development
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HNRNPAB
heterogeneous nuclear ribonucleoprotein A/B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BANF1
BAF nuclear assembly factor 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HNRNPH3
heterogeneous nuclear ribonucleoprotein H3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HNRNPA2B1
heterogeneous nuclear ribonucleoprotein A2/B1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HNRNPR
heterogeneous nuclear ribonucleoprotein R
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EXOSC2
exosome component 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SREK1
splicing regulatory glutamic acid and lysine rich protein 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EXOSC9
exosome component 9
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SYNCRIP
synaptotagmin binding cytoplasmic RNA interacting protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SSB
small RNA binding exonuclease protection factor La
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ELAVL1
ELAV like RNA binding protein 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NPM1
nucleophosmin 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PABPC1
poly(A) binding protein cytoplasmic 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A087WTT1
- E5RFD8
- E5RGC4
- E5RGH3
- E5RH24
- E5RHG7
- E5RJB9
- E5RJM8
- E7EQV3
- E7ERJ7
- H0YAP2
- H0YAR2
- H0YAS6
- H0YAS7
- H0YAW6
- H0YB75
- H0YB86
- H0YBN4
- H0YC10
- P11940
- NCBI
PCBP2
poly(rC) binding protein 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SUB1
SUB1 regulator of transcription
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRDX3
peroxiredoxin 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NONO
non-POU domain containing octamer binding
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
ALYREF
Aly/REF export factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
HNRNPK
heterogeneous nuclear ribonucleoprotein K
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EIF4A3
eukaryotic translation initiation factor 4A3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CDK9
cyclin dependent kinase 9
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A0G2JRV3
- A0A0U1RQQ2
- A0A0U1RRB8
- A0A2R8Y5N5
- A0A2R8Y5Z2
- A0A2R8YDN6
- A0A2R8YEE8
- B5MCL5
- C9JTA6
- G5E975
- Q12824
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
28
|
DDX5 | ENSG00000108654 | DEAD-box helicase 5 | ||
| A0A0G2JLI4 J3KRX8 J3KRZ1 J3KTA4 J3KTQ4 J3QKN9 J3QLG9 J3QR02 J3QR62 J3QRN5 J3QRQ7 J3QS79 J3QS97 J3QSF1 K7EKV0 P17844 X6RLV5 | ||||
| 1655 | ||||
| Spliceosome | ||||
28
|
SF3B4 | ENSG00000143368 | splicing factor 3b subunit 4 | ||
| Q15427 Q5SZ64 | ||||
| 10262 | ||||
| Spliceosome | ||||
23
|
SFPQ | ENSG00000116560 | splicing factor proline and glutamine rich | ||
| H0Y9K7 H0Y9U2 P23246 | ||||
| 6421 | ||||
11
|
SAFB | ENSG00000160633 | scaffold attachment factor B | ||
| K7EII0 K7ES42 Q15424 | ||||
| 6294 | ||||
26
|
PTBP1 | ENSG00000011304 | polypyrimidine tract binding protein 1 | ||
| A0A087WTS6 A0A087WU68 A0A087WUW5 A0A0D9SF20 A0A0U1RRM4 A6NLN1 K7EK45 K7EKJ7 K7EKX4 K7ELW5 K7ES59 P26599 | ||||
| 5725 | ||||
25
|
HIRA | ENSG00000100084 | histone cell cycle regulator | ||
| H7C2A7 P54198 | ||||
| 7290 | ||||
26
|
KHSRP | ENSG00000088247 | KH-type splicing regulatory protein | ||
| A0A087WTP3 M0QXW7 M0QYG1 M0QYH3 M0R0C6 M0R0I5 M0R251 M0R263 M0R3J3 Q92945 | ||||
| 8570 | ||||
28
|
EED | ENSG00000074266 | embryonic ectoderm development | ||
| A0A5F9ZI63 E9PJK2 E9PMU3 H0YEL4 O75530 | ||||
| 8726 | ||||
27
|
HNRNPAB | ENSG00000197451 | heterogeneous nuclear ribonucleoprotein A/B | ||
| D6R9P3 D6RBZ0 D6RD18 Q99729 | ||||
| 3182 | ||||
20
|
BANF1 | ENSG00000175334 | BAF nuclear assembly factor 1 | ||
| E9PJJ8 O75531 | ||||
| 8815 | ||||
20
|
HNRNPH3 | ENSG00000096746 | heterogeneous nuclear ribonucleoprotein H3 | ||
| P31942 | ||||
| 3189 | ||||
28
|
HNRNPA2B1 | ENSG00000122566 | heterogeneous nuclear ribonucleoprotein A2/B1 | ||
| A0A087WUI2 P22626 | ||||
| 3181 | ||||
23
|
HNRNPR | ENSG00000125944 | heterogeneous nuclear ribonucleoprotein R | ||
| A0A286YEZ8 B4DT28 O43390 | ||||
| 10236 | ||||
21
|
EXOSC2 | ENSG00000130713 | exosome component 2 | ||
| A3KFL1 A3KFL2 A3KFL5 Q13868 | ||||
| 23404 | ||||
| RNA degradation | ||||
16
|
SREK1 | ENSG00000153914 | splicing regulatory glutamic acid and lysine rich protein 1 | ||
| A0A087WY03 E5RFV3 E5RJ76 E5RK30 H0YC47 Q8WXA9 | ||||
| 140890 | ||||
20
|
EXOSC9 | ENSG00000123737 | exosome component 9 | ||
| D6R905 D6RA17 D6RAP4 D6RIY6 H0Y9L5 Q06265 | ||||
| 5393 | ||||
| RNA degradation | ||||
22
|
SYNCRIP | ENSG00000135316 | synaptotagmin binding cytoplasmic RNA interacting protein | ||
| B7Z645 F6UXX1 O60506 | ||||
| 10492 | ||||
26
|
SSB | ENSG00000138385 | small RNA binding exonuclease protection factor La | ||
| E7ERC4 E9PFL9 E9PGX9 P05455 | ||||
| 6741 | ||||
22
|
ELAVL1 | ENSG00000066044 | ELAV like RNA binding protein 1 | ||
| M0QZR9 M0R055 Q15717 | ||||
| 1994 | ||||
| AMPK signaling pathway IL-17 signaling pathway | ||||
23
|
NPM1 | ENSG00000181163 | nucleophosmin 1 | ||
| E5RGW4 E5RI98 P06748 | ||||
| 4869 | ||||
26
|
PABPC1 | ENSG00000070756 | poly(A) binding protein cytoplasmic 1 | ||
| A0A087WTT1 E5RFD8 E5RGC4 E5RGH3 E5RH24 E5RHG7 E5RJB9 E5RJM8 E7EQV3 E7ERJ7 H0YAP2 H0YAR2 H0YAS6 H0YAS7 H0YAW6 H0YB75 H0YB86 H0YBN4 H0YC10 P11940 | ||||
| 26986 | ||||
| RNA degradation RNA transport mRNA surveillance pathway | ||||
19
|
PCBP2 | ENSG00000197111 | poly(rC) binding protein 2 | ||
| F8VRH0 F8VTZ0 F8VXH9 F8VZX2 F8W0G4 F8W1G6 H3BND9 H3BRU6 H3BSP4 H3BSS4 Q15366 | ||||
| 5094 | ||||
22
|
SUB1 | ENSG00000113387 | SUB1 regulator of transcription | ||
| D6R970 D6RC37 P53999 | ||||
| 10923 | ||||
11
|
PRDX3 | ENSG00000165672 | peroxiredoxin 3 | ||
| P30048 | ||||
| 10935 | ||||
22
|
NONO | ENSG00000147140 | non-POU domain containing octamer binding | ||
| C9IZL7 C9J4X2 C9JJ13 C9JYS8 H7C367 Q15233 | ||||
| 4841 | ||||
29
|
ALYREF | ENSG00000183684 | Aly/REF export factor | ||
| E9PB61 Q86V81 | ||||
| 10189 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
28
|
HNRNPK | ENSG00000165119 | heterogeneous nuclear ribonucleoprotein K | ||
| P61978 Q5T6W2 S4R359 S4R457 | ||||
| 3190 | ||||
| Spliceosome | ||||
26
|
EIF4A3 | ENSG00000141543 | eukaryotic translation initiation factor 4A3 | ||
| I3L3H2 P38919 | ||||
| 9775 | ||||
| Spliceosome RNA transport mRNA surveillance pathway | ||||
20
|
CDK9 | ENSG00000136807 | cyclin dependent kinase 9 | ||
| P50750 X6RE90 | ||||
| 1025 | ||||
12
|
SMARCB1 | ENSG00000099956 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 | ||
| A0A0G2JRV3 A0A0U1RQQ2 A0A0U1RRB8 A0A2R8Y5N5 A0A2R8Y5Z2 A0A2R8YDN6 A0A2R8YEE8 B5MCL5 C9JTA6 G5E975 Q12824 | ||||
| 6598 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
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jSquid_subnetworks.xml | 311.94 KB | |
H.sapiens_subnetwork.tsv | 63.29 KB |