- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000137815
- RTF1 homolog, Paf1/RNA …
- PAF1
- PAF1 homolog, Paf1/RNA …
- 1.000
- PPI
- LEO1
- LEO1 homolog, Paf1/RNA …
- 1.000
- PPI
- CTR9
- CTR9 homolog, Paf1/RNA …
- 1.000
- PPI
- CDC73
- cell division cycle 73
- 1.000
- PPI
- TCEA1
- transcription elongatio…
- 1.000
- PPI
- SUPT16H
- SPT16 homolog, facilita…
- 1.000
- PPI
- POLR2A
- RNA polymerase II subun…
- 1.000
- PPI
- RNF20
- ring finger protein 20
- 1.000
- Complex
- WDR61
- WD repeat domain 61
- 1.000
- PPI
- SSRP1
- structure specific reco…
- 1.000
- Metabolic
- POLR2B
- RNA polymerase II subun…
- 1.000
- Metabolic
- RNF40
- ring finger protein 40
- 0.999
- Complex
- SUPT5H
- SPT5 homolog, DSIF elon…
- 0.999
- PPI
- CHD1
- chromodomain helicase D…
- 0.999
- PPI
- PEX2
- peroxisomal biogenesis …
- 0.999
- Complex
- CSNK2A1
- casein kinase 2 alpha 1
- 0.999
- PPI
- POLR2C
- RNA polymerase II subun…
- 0.997
- PPI
- CDK1
- cyclin dependent kinase…
- 0.997
- PPI
- CHD2
- chromodomain helicase D…
- 0.997
- PPI
- CKS1B
- CDC28 protein kinase re…
- 0.997
- PPI
- PTPN11
- protein tyrosine phosph…
- 0.996
- PPI
- EFTUD2
- elongation factor Tu GT…
- 0.995
- PPI
- POLR3C
- RNA polymerase III subu…
- 0.994
- PPI
- PRPF31
- pre-mRNA processing fac…
- 0.993
- Metabolic
- SMARCA5
- SWI/SNF related, matrix…
- 0.993
- PPI
- UBE2A
- ubiquitin conjugating e…
- 0.993
- PPI
- SMARCD1
- SWI/SNF related, matrix…
- 0.992
- Metabolic
- UBE2B
- ubiquitin conjugating e…
- 0.992
- PPI
- EIF3A
- eukaryotic translation …
- 0.992
- Complex
- GTF2B
- general transcription f…
- 0.991
- Metabolic
ENSG00000137815
RTF1 homolog, Paf1/RNA polymerase II complex component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EFTUD2
elongation factor Tu GTP binding domain containing 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SUPT5H
SPT5 homolog, DSIF elongation factor subunit
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CSNK2A1
casein kinase 2 alpha 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A087WY74
- A0A2R8Y3W6
- A0A2R8Y4D6
- A0A2R8Y4H0
- A0A2R8Y5A0
- A0A2R8Y797
- A0A2R8Y7T1
- A0A2R8YCC9
- A0A2R8YCK2
- A0A2R8YD58
- A0A2R8YDP2
- A0A2R8YDY7
- A0A2R8YEL7
- A0A2R8YEW1
- A0A2R8YF43
- A0A2R8YF47
- A0A2R8YFU2
- E7EU96
- P68400
- V9GY80
- V9GYA2
- V9GYW6
- NCBI
WDR61
WD repeat domain 61
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TCEA1
transcription elongation factor A1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR2C
RNA polymerase II subunit C
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR2B
RNA polymerase II subunit B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SMARCD1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR3C
RNA polymerase III subunit C
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RNF20
ring finger protein 20
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CDK1
cyclin dependent kinase 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CKS1B
CDC28 protein kinase regulatory subunit 1B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
UBE2B
ubiquitin conjugating enzyme E2 B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
RNF40
ring finger protein 40
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
POLR2A
RNA polymerase II subunit A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
GTF2B
general transcription factor IIB
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SSRP1
structure specific recognition protein 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
UBE2A
ubiquitin conjugating enzyme E2 A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PEX2
peroxisomal biogenesis factor 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CHD1
chromodomain helicase DNA binding protein 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EIF3A
eukaryotic translation initiation factor 3 subunit A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PAF1
PAF1 homolog, Paf1/RNA polymerase II complex component
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CHD2
chromodomain helicase DNA binding protein 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- A0A0D9SEH6
- A0A0D9SEP7
- A0A0D9SET4
- A0A0D9SEU0
- A0A0D9SF92
- A0A0D9SFA3
- A0A0D9SFV4
- A0A0D9SFV8
- A0A0D9SGA6
- A0A0D9SGK0
- A0A1B0GTM9
- A0A1B0GTU9
- A0A1B0GU59
- B7Z3I4
- O14647
- NCBI
PRPF31
pre-mRNA processing factor 31
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CDC73
cell division cycle 73
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PTPN11
protein tyrosine phosphatase non-receptor type 11
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000137815 | ENSG00000137815 | RTF1 homolog, Paf1/RNA polymerase II complex component | ||
| H0YKX1 Q92541 | ||||
| 23168 |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
28
|
CTR9 | ENSG00000198730 | CTR9 homolog, Paf1/RNA polymerase II complex component | ||
| A0A2R8Y3S3 H0YCE8 Q6PD62 | ||||
| 9646 | ||||
25
|
EFTUD2 | ENSG00000108883 | elongation factor Tu GTP binding domain containing 2 | ||
| K7EIT3 K7EIV5 K7EJ74 K7EP67 K7EQ26 K7ERJ5 Q15029 | ||||
| 9343 | ||||
| Spliceosome | ||||
24
|
SUPT5H | ENSG00000196235 | SPT5 homolog, DSIF elongation factor subunit | ||
| M0QYL9 M0R105 M0R2M5 O00267 | ||||
| 6829 | ||||
27
|
CSNK2A1 | ENSG00000101266 | casein kinase 2 alpha 1 | ||
| A0A087WY74 A0A2R8Y3W6 A0A2R8Y4D6 A0A2R8Y4H0 A0A2R8Y5A0 A0A2R8Y797 A0A2R8Y7T1 A0A2R8YCC9 A0A2R8YCK2 A0A2R8YD58 A0A2R8YDP2 A0A2R8YDY7 A0A2R8YEL7 A0A2R8YEW1 A0A2R8YF43 A0A2R8YF47 A0A2R8YFU2 E7EU96 P68400 V9GY80 V9GYA2 V9GYW6 | ||||
| 1457 | ||||
| Adherens junction Wnt signaling pathway NF-kappa B signaling pathway | ||||
| Ribosome biogenesis in eukaryotes | ||||
27
|
WDR61 | ENSG00000140395 | WD repeat domain 61 | ||
| H0YL19 H0YLA1 H0YM76 H0YMF9 H0YN81 H3BQA8 Q9GZS3 | ||||
| 80349 | ||||
| RNA degradation | ||||
27
|
TCEA1 | ENSG00000187735 | transcription elongation factor A1 | ||
| A0A1W2PPV7 A0A1W2PPZ5 A0A1W2PRL9 A0A1W2PS15 B7Z4S1 E5RFI1 E5RIS7 E5RJ93 E5RK46 P23193 | ||||
| 6917 | ||||
27
|
POLR2C | ENSG00000102978 | RNA polymerase II subunit C | ||
| H3BRR2 P19387 | ||||
| 5432 | ||||
| RNA polymerase | ||||
30
|
LEO1 | ENSG00000166477 | LEO1 homolog, Paf1/RNA polymerase II complex component | ||
| Q8WVC0 | ||||
| 123169 | ||||
28
|
SUPT16H | ENSG00000092201 | SPT16 homolog, facilitates chromatin remodeling subunit | ||
| G3V2X0 G3V401 G3V5A4 Q9Y5B9 | ||||
| 11198 | ||||
29
|
POLR2B | ENSG00000047315 | RNA polymerase II subunit B | ||
| A0A1W2PPT5 C9J2Y9 C9J4M6 C9JMN3 C9JZW8 P30876 | ||||
| 5431 | ||||
| RNA polymerase | ||||
26
|
SMARCD1 | ENSG00000066117 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 | ||
| F8VRQ4 F8VUB0 F8VW95 F8VZ70 H0YHV1 Q96GM5 | ||||
| 6602 | ||||
25
|
POLR3C | ENSG00000186141 | RNA polymerase III subunit C | ||
| E9PHH9 Q9BUI4 | ||||
| 10623 | ||||
| Cytosolic DNA-sensing pathway | ||||
| RNA polymerase | ||||
29
|
SMARCA5 | ENSG00000153147 | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 | ||
| O60264 | ||||
| 8467 | ||||
29
|
RNF20 | ENSG00000155827 | ring finger protein 20 | ||
| C9J0A5 C9JWJ4 C9JXC9 Q5VTR2 | ||||
| 56254 | ||||
22
|
CDK1 | ENSG00000170312 | cyclin dependent kinase 1 | ||
| A0A024QZP7 A0A087WZZ9 E5RIU6 P06493 | ||||
| 983 | ||||
| p53 signaling pathway Oocyte meiosis Gap junction Cell cycle Progesterone-mediated oocyte maturation | ||||
21
|
CKS1B | ENSG00000173207 | CDC28 protein kinase regulatory subunit 1B | ||
| P61024 Q5T179 Q9BZU3 | ||||
| 1163 | ||||
18
|
UBE2B | ENSG00000119048 | ubiquitin conjugating enzyme E2 B | ||
| D6RDW8 H0Y9V2 H0YA80 P63146 | ||||
| 7320 | ||||
| Ubiquitin mediated proteolysis | ||||
28
|
RNF40 | ENSG00000103549 | ring finger protein 40 | ||
| A0A087WTK2 H3BP71 H3BQ99 H3BS50 H3BUL6 I3L332 O75150 R4GN66 | ||||
| 9810 | ||||
27
|
POLR2A | ENSG00000181222 | RNA polymerase II subunit A | ||
| A0A590UJN4 A0A590UKB6 P24928 | ||||
| 5430 | ||||
| RNA polymerase | ||||
28
|
GTF2B | ENSG00000137947 | general transcription factor IIB | ||
| B1APE1 B1APE2 Q00403 | ||||
| 2959 | ||||
| Basal transcription factors | ||||
27
|
SSRP1 | ENSG00000149136 | structure specific recognition protein 1 | ||
| A0A0U1RRK2 E9PMD4 E9PPZ7 Q08945 | ||||
| 6749 | ||||
18
|
UBE2A | ENSG00000077721 | ubiquitin conjugating enzyme E2 A | ||
| A0A0D9SEZ6 A0A0D9SF75 A0A0D9SG71 A0A0R4J2E5 P49459 | ||||
| 7319 | ||||
| Ubiquitin mediated proteolysis | ||||
15
|
PEX2 | ENSG00000164751 | peroxisomal biogenesis factor 2 | ||
| E5RIW9 P28328 | ||||
| 5828 | ||||
| Peroxisome | ||||
21
|
CHD1 | ENSG00000153922 | chromodomain helicase DNA binding protein 1 | ||
| A0A087WVF4 H0Y8V4 H0Y8Z0 O14646 | ||||
| 1105 | ||||
24
|
EIF3A | ENSG00000107581 | eukaryotic translation initiation factor 3 subunit A | ||
| Q14152 | ||||
| 8661 | ||||
| RNA transport | ||||
26
|
PAF1 | ENSG00000006712 | PAF1 homolog, Paf1/RNA polymerase II complex component | ||
| B4DGJ5 M0QYC7 Q8N7H5 | ||||
| 54623 | ||||
17
|
CHD2 | ENSG00000173575 | chromodomain helicase DNA binding protein 2 | ||
| A0A0D9SEH6 A0A0D9SEP7 A0A0D9SET4 A0A0D9SEU0 A0A0D9SF92 A0A0D9SFA3 A0A0D9SFV4 A0A0D9SFV8 A0A0D9SGA6 A0A0D9SGK0 A0A1B0GTM9 A0A1B0GTU9 A0A1B0GU59 B7Z3I4 O14647 | ||||
| 1106 | ||||
21
|
PRPF31 | ENSG00000105618 | pre-mRNA processing factor 31 | ||
| E7EN72 E7ESX0 E7EU94 E7EVX8 Q8WWY3 | ||||
| 26121 | ||||
| Spliceosome | ||||
27
|
CDC73 | ENSG00000134371 | cell division cycle 73 | ||
| A0A1B0GUB2 A0A2R8Y640 A0A2R8YHB3 A0A3B3IRP5 A0A3B3ISN2 Q6P1J9 | ||||
| 79577 | ||||
5
|
PTPN11 | ENSG00000179295 | protein tyrosine phosphatase non-receptor type 11 | ||
| A0A0U1RRI0 A0A1W2PPU4 H0YF12 Q06124 | ||||
| 5781 | ||||
| Adipocytokine signaling pathway Neurotrophin signaling pathway Ras signaling pathway JAK-STAT signaling pathway Natural killer cell mediated cytotoxicity Leukocyte transendothelial migration Phospholipase D signaling pathway C-type lectin receptor signaling pathway |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
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jSquid_subnetworks.xml | 331.53 KB | |
H.sapiens_subnetwork.tsv | 72.38 KB |