- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000136875
- pre-mRNA processing fac…
- LSM4
- LSM4 homolog, U6 small …
- 1.000
- PPI
- SNU13
- small nuclear ribonucle…
- 1.000
- PPI
- SART1
- spliceosome associated …
- 1.000
- PPI
- LSM6
- LSM6 homolog, U6 small …
- 1.000
- PPI
- PRPF3
- pre-mRNA processing fac…
- 1.000
- PPI
- PRPF8
- pre-mRNA processing fac…
- 1.000
- Complex
- PRPF31
- pre-mRNA processing fac…
- 1.000
- Complex
- PRPF6
- pre-mRNA processing fac…
- 1.000
- Complex
- PPIH
- peptidylprolyl isomeras…
- 1.000
- PPI
- SNRPD2
- small nuclear ribonucle…
- 1.000
- PPI
- SNRNP40
- small nuclear ribonucle…
- 1.000
- PPI
- LSM8
- LSM8 homolog, U6 small …
- 1.000
- PPI
- SNRPF
- small nuclear ribonucle…
- 1.000
- Complex
- DDX23
- DEAD-box helicase 23
- 1.000
- PPI
- LSM3
- LSM3 homolog, U6 small …
- 1.000
- Complex
- LSM7
- LSM7 homolog, U6 small …
- 1.000
- PPI
- LSM5
- LSM5 homolog, U6 small …
- 1.000
- PPI
- SF3A3
- splicing factor 3a subu…
- 1.000
- Metabolic
- LSM2
- LSM2 homolog, U6 small …
- 1.000
- PPI
- EFTUD2
- elongation factor Tu GT…
- 1.000
- Complex
- SNRNP200
- small nuclear ribonucle…
- 1.000
- Complex
- SNRPD3
- small nuclear ribonucle…
- 1.000
- PPI
- SART3
- spliceosome associated …
- 1.000
- Complex
- U2AF1
- U2 small nuclear RNA au…
- 1.000
- PPI
- PRPF4B
- pre-mRNA processing fac…
- 1.000
- PPI
- SNRPD1
- small nuclear ribonucle…
- 1.000
- PPI
- USP39
- ubiquitin specific pept…
- 1.000
- PPI
- PNN
- pinin, desmosome associ…
- 1.000
- Complex
- SF3B3
- splicing factor 3b subu…
- 1.000
- Metabolic
- TXNL4A
- thioredoxin like 4A
- 1.000
- PPI
ENSG00000136875
pre-mRNA processing factor 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SART3
spliceosome associated factor 3, U4/U6 recycling protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM4
LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF31
pre-mRNA processing factor 31
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
EFTUD2
elongation factor Tu GTP binding domain containing 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPF
small nuclear ribonucleoprotein polypeptide F
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPD1
small nuclear ribonucleoprotein D1 polypeptide
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDX23
DEAD-box helicase 23
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPD3
small nuclear ribonucleoprotein D3 polypeptide
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SF3A3
splicing factor 3a subunit 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM2
LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF8
pre-mRNA processing factor 8
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PNN
pinin, desmosome associated protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRNP40
small nuclear ribonucleoprotein U5 subunit 40
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
USP39
ubiquitin specific peptidase 39
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
U2AF1
U2 small nuclear RNA auxiliary factor 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM6
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRPD2
small nuclear ribonucleoprotein D2 polypeptide
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PPIH
peptidylprolyl isomerase H
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LSM8
LSM8 homolog, U6 small nuclear RNA associated
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF4B
pre-mRNA processing factor 4B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SF3B3
splicing factor 3b subunit 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF6
pre-mRNA processing factor 6
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
TXNL4A
thioredoxin like 4A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNRNP200
small nuclear ribonucleoprotein U5 subunit 200
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF3
pre-mRNA processing factor 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SART1
spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNU13
small nuclear ribonucleoprotein 13
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
30
|
ENSG00000136875 | ENSG00000136875 | pre-mRNA processing factor 4 | ||
| O43172 | ||||
| 9128 | ||||
| Spliceosome |
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
29
|
SART3 | ENSG00000075856 | spliceosome associated factor 3, U4/U6 recycling protein | ||
| A0A494C0L2 A0A499FI31 F8VVK9 F8VZM2 F8W667 H0YHU8 Q15020 | ||||
| 9733 | ||||
29
|
LSM4 | ENSG00000130520 | LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| M0QXB0 Q9Y4Z0 U3KQK1 V9GZ56 | ||||
| 25804 | ||||
| RNA degradation Spliceosome | ||||
30
|
LSM7 | ENSG00000130332 | LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| A0A087X2I5 K7EML7 K7ENY5 Q9UK45 | ||||
| 51690 | ||||
| RNA degradation Spliceosome | ||||
30
|
PRPF31 | ENSG00000105618 | pre-mRNA processing factor 31 | ||
| E7EN72 E7ESX0 E7EU94 E7EVX8 Q8WWY3 | ||||
| 26121 | ||||
| Spliceosome | ||||
30
|
EFTUD2 | ENSG00000108883 | elongation factor Tu GTP binding domain containing 2 | ||
| K7EIT3 K7EIV5 K7EJ74 K7EP67 K7EQ26 K7ERJ5 Q15029 | ||||
| 9343 | ||||
| Spliceosome | ||||
30
|
SNRPF | ENSG00000139343 | small nuclear ribonucleoprotein polypeptide F | ||
| A0A0B4J254 F8W0W6 P62306 | ||||
| 6636 | ||||
| Spliceosome | ||||
30
|
SNRPD1 | ENSG00000167088 | small nuclear ribonucleoprotein D1 polypeptide | ||
| J3QLI9 J3QLR7 P62314 | ||||
| 6632 | ||||
| Spliceosome | ||||
30
|
DDX23 | ENSG00000174243 | DEAD-box helicase 23 | ||
| F8VVA2 F8W1J5 H0YI52 H0YIL9 Q9BUQ8 | ||||
| 9416 | ||||
| Spliceosome | ||||
30
|
SNRPD3 | ENSG00000100028 | small nuclear ribonucleoprotein D3 polypeptide | ||
| P62318 | ||||
| 6634 | ||||
| Spliceosome | ||||
30
|
SF3A3 | ENSG00000183431 | splicing factor 3a subunit 3 | ||
| Q12874 | ||||
| 10946 | ||||
| Spliceosome | ||||
30
|
LSM5 | ENSG00000106355 | LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| B8ZZF8 F8W8Y8 Q9Y4Y9 | ||||
| 23658 | ||||
| RNA degradation Spliceosome | ||||
30
|
LSM2 | ENSG00000204392 | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| Q9Y333 | ||||
| 57819 | ||||
| RNA degradation Spliceosome | ||||
30
|
PRPF8 | ENSG00000174231 | pre-mRNA processing factor 8 | ||
| I3L0J9 I3L1T8 I3L3Z8 Q6P2Q9 | ||||
| 10594 | ||||
| Spliceosome | ||||
30
|
LSM3 | ENSG00000170860 | LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| P62310 | ||||
| 27258 | ||||
| RNA degradation Spliceosome | ||||
30
|
PNN | ENSG00000100941 | pinin, desmosome associated protein | ||
| G3V579 G3V5F0 Q9H307 | ||||
| 5411 | ||||
| RNA transport mRNA surveillance pathway | ||||
30
|
SNRNP40 | ENSG00000060688 | small nuclear ribonucleoprotein U5 subunit 40 | ||
| Q96DI7 Q9NSS8 | ||||
| 9410 | ||||
| Spliceosome | ||||
30
|
USP39 | ENSG00000168883 | ubiquitin specific peptidase 39 | ||
| A0A087WW31 A0A087X1B2 B9A018 C9J0X5 C9JIU2 F8WC91 Q53GS9 | ||||
| 10713 | ||||
| Spliceosome | ||||
30
|
U2AF1 | ENSG00000160201 | U2 small nuclear RNA auxiliary factor 1 | ||
| A0A1B0GW87 Q01081 | ||||
| 102724594 7307 | ||||
| Spliceosome | ||||
29
|
LSM6 | ENSG00000164167 | LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated | ||
| P62312 | ||||
| 11157 | ||||
| RNA degradation Spliceosome | ||||
30
|
SNRPD2 | ENSG00000125743 | small nuclear ribonucleoprotein D2 polypeptide | ||
| K7EJB5 K7ERG4 P62316 | ||||
| 6633 | ||||
| Spliceosome | ||||
30
|
PPIH | ENSG00000171960 | peptidylprolyl isomerase H | ||
| A6NM32 C9JAN8 C9JQD4 H0YEL5 O43447 | ||||
| 10465 | ||||
| Spliceosome | ||||
29
|
LSM8 | ENSG00000128534 | LSM8 homolog, U6 small nuclear RNA associated | ||
| C9JIZ0 C9JNV3 F2Z2Y6 O95777 | ||||
| 51691 | ||||
| RNA degradation Spliceosome | ||||
26
|
PRPF4B | ENSG00000112739 | pre-mRNA processing factor 4B | ||
| H0YDJ3 Q13523 | ||||
| 8899 | ||||
30
|
SF3B3 | ENSG00000189091 | splicing factor 3b subunit 3 | ||
| H3BMB0 I3L4G7 J3QKV4 J3QL37 J3QRB2 Q15393 | ||||
| 23450 | ||||
| Spliceosome | ||||
30
|
PRPF6 | ENSG00000101161 | pre-mRNA processing factor 6 | ||
| O94906 | ||||
| 24148 | ||||
| Spliceosome | ||||
28
|
TXNL4A | ENSG00000141759 | thioredoxin like 4A | ||
| K7EJU2 K7EMX5 K7EPA6 K7ES07 K7ESL1 O14835 P83876 | ||||
| 10907 | ||||
| Spliceosome | ||||
30
|
SNRNP200 | ENSG00000144028 | small nuclear ribonucleoprotein U5 subunit 200 | ||
| A0A494C1A5 O75643 | ||||
| 23020 | ||||
| Spliceosome | ||||
30
|
PRPF3 | ENSG00000117360 | pre-mRNA processing factor 3 | ||
| O43395 | ||||
| 9129 | ||||
| Spliceosome | ||||
30
|
SART1 | ENSG00000175467 | spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP | ||
| E9PQI8 O43290 | ||||
| 9092 | ||||
| Spliceosome | ||||
30
|
SNU13 | ENSG00000100138 | small nuclear ribonucleoprotein 13 | ||
| A0A3B3IRU2 A0A3B3ISH1 A0A3B3ISH9 A0A3B3ISK4 A0A3B3IUA2 B1AHD1 P55769 | ||||
| 4809 | ||||
| Ribosome biogenesis in eukaryotes Spliceosome |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
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jSquid_subnetworks.xml | 361.72 KB | |
H.sapiens_subnetwork.tsv | 88.81 KB |