Found 1 of 1 query genes

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Query interactions

Interaction partners
Confidence
Network
MEX
PIN
SCL
PHP
MIR
TFB
PEX
GIN
DOM
QMS
GRG
Evidence types
HSA
MMU
RNO
CFA
GGA
DRE
CIN
DME
CEL
BTA
SCE
ATH
SPO
BSU
ECO
PFA
DDI
SSO
SSC
MJA
OSA
Species
In Gold st.

ID Query gene
ID Query ortholog

Log-likelihood ratio (LLR)
	Highly positive
	Positive
	Zero
	Negative
	Highly negative
Known coupling
	This network
	Other network

2. ENSG00000135018
3. ubiquilin 1
- 2. PSMD6
  3. proteasome 26S subunit,…
  4. 1.000
  5. PPI
- 2. PSMD2
  3. proteasome 26S subunit,…
  4. 1.000
  5. PPI
- 2. PSMD14
  3. proteasome 26S subunit,…
  4. 1.000
  5. PPI
- 2. PSMD4
  3. proteasome 26S subunit,…
  4. 1.000
  5. PPI
- 2. ADRM1
  3. adhesion regulating mol…
  4. 1.000
  5. PPI
- 2. UBC
  3. ubiquitin C
  4. 1.000
  5. PPI
- 2. VCP
  3. valosin containing prot…
  4. 1.000
  5. PPI
- 2. PSMC5
  3. proteasome 26S subunit,…
  4. 1.000
  5. Metabolic
- 2. RAD23B
  3. RAD23 homolog B, nucleo…
  4. 1.000
  5. PPI
- 2. PSMC1
  3. proteasome 26S subunit,…
  4. 1.000
  5. PPI
- 2. RAD23A
  3. RAD23 homolog A, nucleo…
  4. 1.000
  5. PPI
- 2. NPLOC4
  3. NPL4 homolog, ubiquitin…
  4. 1.000
  5. PPI
- 2. STAM2
  3. signal transducing adap…
  4. 1.000
  5. PPI
- 2. PSMD13
  3. proteasome 26S subunit,…
  4. 1.000
  5. Metabolic
- 2. PSMA7
  3. proteasome 20S subunit …
  4. 1.000
  5. Metabolic
- 2. PSMD7
  3. proteasome 26S subunit,…
  4. 1.000
  5. Metabolic
- 2. RACK1
  3. receptor for activated …
  4. 1.000
  5. Complex
- 2. PSMC2
  3. proteasome 26S subunit,…
  4. 1.000
  5. Metabolic
- 2. UBA1
  3. ubiquitin like modifier…
  4. 1.000
  5. Complex
- 2. PSMD11
  3. proteasome 26S subunit,…
  4. 1.000
  5. Complex
- 2. UBQLN2
  3. ubiquilin 2
  4. 1.000
  5. PPI
- 2. CSTF2
  3. cleavage stimulation fa…
  4. 1.000
  5. PPI
- 2. CD47
  3. CD47 molecule
  4. 1.000
  5. PPI
- 2. PPIB
  3. peptidylprolyl isomeras…
  4. 1.000
  5. PPI
- 2. CSTF2T
  3. cleavage stimulation fa…
  4. 1.000
  5. PPI
- 2. PSMD1
  3. proteasome 26S subunit,…
  4. 1.000
  5. PPI
- 2. PSMC3
  3. proteasome 26S subunit,…
  4. 0.999
  5. Metabolic
- 2. RPS2
  3. ribosomal protein S2
  4. 0.999
  5. Complex
- 2. UBE2N
  3. ubiquitin conjugating e…
  4. 0.999
  5. Complex
- 2. PSMA5
  3. proteasome 20S subunit …
  4. 0.999
  5. Metabolic

Subnetwork gene interactions

ENSG00000135018

ubiquilin 1

FunCoup

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Ensembl

ENSG00000135018

UniProt

NCBI

29979

ADRM1

adhesion regulating molecule 1

FunCoup

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Ensembl

ENSG00000130706

UniProt

NCBI

11047

UBE2N

ubiquitin conjugating enzyme E2 N

FunCoup

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Ensembl

ENSG00000177889

UniProt

NCBI

7334

PSMD4

proteasome 26S subunit, non-ATPase 4

FunCoup

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Ensembl

ENSG00000159352

UniProt

NCBI

5710

RACK1

receptor for activated C kinase 1

FunCoup

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Ensembl

ENSG00000204628

UniProt

NCBI

10399

PSMD6

proteasome 26S subunit, non-ATPase 6

FunCoup

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Ensembl

ENSG00000163636

UniProt

NCBI

9861

PSMC3

proteasome 26S subunit, ATPase 3

FunCoup

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Ensembl

ENSG00000165916

UniProt

NCBI

5702

PSMD13

proteasome 26S subunit, non-ATPase 13

FunCoup

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Ensembl

ENSG00000185627

UniProt

NCBI

5719

UBC

ubiquitin C

FunCoup

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Ensembl

ENSG00000150991

UniProt

NCBI

7316

PSMA7

proteasome 20S subunit alpha 7

FunCoup

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Ensembl

ENSG00000101182

UniProt

NCBI

5688

PSMA5

proteasome 20S subunit alpha 5

FunCoup

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Ensembl

ENSG00000143106

UniProt

P28066

NCBI

5686

RPS2

ribosomal protein S2

FunCoup

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Ensembl

ENSG00000140988

UniProt

NCBI

6187

RAD23B

RAD23 homolog B, nucleotide excision repair protein

FunCoup

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Ensembl

ENSG00000119318

UniProt

NCBI

5887

PSMD11

proteasome 26S subunit, non-ATPase 11

FunCoup

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Ensembl

ENSG00000108671

UniProt

NCBI

5717

PSMD7

proteasome 26S subunit, non-ATPase 7

FunCoup

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Ensembl

ENSG00000103035

UniProt

NCBI

5713

UBA1

ubiquitin like modifier activating enzyme 1

FunCoup

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Ensembl

ENSG00000130985

UniProt

NCBI

7317

PSMC2

proteasome 26S subunit, ATPase 2

FunCoup

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Ensembl

ENSG00000161057

UniProt

NCBI

5701

VCP

valosin containing protein

FunCoup

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Ensembl

ENSG00000165280

UniProt

NCBI

7415

STAM2

signal transducing adaptor molecule 2

FunCoup

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Ensembl

ENSG00000115145

UniProt

O75886

NCBI

10254

PSMC5

proteasome 26S subunit, ATPase 5

FunCoup

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Ensembl

ENSG00000087191

UniProt

NCBI

5705

PSMD2

proteasome 26S subunit, non-ATPase 2

FunCoup

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Ensembl

ENSG00000175166

UniProt

NCBI

5708

PSMD14

proteasome 26S subunit, non-ATPase 14

FunCoup

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Ensembl

ENSG00000115233

UniProt

NCBI

10213

PSMC1

proteasome 26S subunit, ATPase 1

FunCoup

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Ensembl

ENSG00000100764

UniProt

NCBI

5700

CSTF2T

cleavage stimulation factor subunit 2 tau variant

FunCoup

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Ensembl

ENSG00000177613

UniProt

Q9H0L4

NCBI

23283

PSMD1

proteasome 26S subunit, non-ATPase 1

FunCoup

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Ensembl

ENSG00000173692

UniProt

NCBI

5707

UBQLN2

ubiquilin 2

FunCoup

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Ensembl

ENSG00000188021

UniProt

Q9UHD9

NCBI

29978

NPLOC4

NPL4 homolog, ubiquitin recognition factor

FunCoup

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Ensembl

ENSG00000182446

UniProt

NCBI

55666

CSTF2

cleavage stimulation factor subunit 2

FunCoup

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Ensembl

ENSG00000101811

UniProt

NCBI

1478

RAD23A

RAD23 homolog A, nucleotide excision repair protein

FunCoup

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Ensembl

ENSG00000179262

UniProt

NCBI

5886

PPIB

peptidylprolyl isomerase B

FunCoup

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Ensembl

ENSG00000166794

UniProt

P23284

NCBI

5479

CD47

CD47 molecule

FunCoup

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Ensembl

ENSG00000196776

UniProt

NCBI

Query genes

		Identifier	Description
30	ENSG00000135018	ENSG00000135018	ubiquilin 1
		UniProt	H0YDS0 H0YEZ9 Q9UMX0
		NCBI	29979
		KEGG metabolic	Protein processing in endoplasmic reticulum

Subnetwork genes

		Identifier	Description
27	ADRM1	ENSG00000130706	adhesion regulating molecule 1
		UniProt	A0A087WUX6 A0A087WX59 Q16186
		NCBI	11047
		KEGG metabolic	Proteasome
27	UBE2N	ENSG00000177889	ubiquitin conjugating enzyme E2 N
		UniProt	F8VQQ8 F8VSD4 F8VV71 F8VZ29 P61088
		NCBI	7334
		KEGG metabolic	Ubiquitin mediated proteolysis
26	PSMD4	ENSG00000159352	proteasome 26S subunit, non-ATPase 4
		UniProt	A6PVX3 H0Y3Y9 H0Y561 H7C2J9 P55036 Q5VWC4
		NCBI	5710
		KEGG metabolic	Proteasome
28	RACK1	ENSG00000204628	receptor for activated C kinase 1
		UniProt	D6R909 D6R9L0 D6R9Z1 D6RAC2 D6RAU2 D6RBD0 D6RDI0 D6REE5 D6RF23 D6RFX4 D6RFZ9 D6RGK8 D6RHH4 D6RHJ5 E9PD14 H0Y8R5 H0Y8W2 H0Y9P0 H0YAF8 H0YAM7 J3KPE3 P63244
		NCBI	10399
27	PSMD6	ENSG00000163636	proteasome 26S subunit, non-ATPase 6
		UniProt	C9J0E9 C9J7B7 H7C531 Q15008
		NCBI	9861
		KEGG metabolic	Proteasome
26	PSMC3	ENSG00000165916	proteasome 26S subunit, ATPase 3
		UniProt	E9PKD5 E9PLG2 E9PM69 E9PMD8 E9PMW0 E9PN50 E9PS45 P17980 R4GNH3
		NCBI	5702
		KEGG metabolic	Proteasome
28	PSMD13	ENSG00000185627	proteasome 26S subunit, non-ATPase 13
		UniProt	A0A087WUL9 E9PL38 E9PPD2 E9PQG3 F8W8J6 H0YD73 J3KNQ3 Q9UNM6
		NCBI	5719
		KEGG metabolic	Proteasome
26	UBC	ENSG00000150991	ubiquitin C
		UniProt	F5GXK7 F5GYU3 F5GZ39 F5H265 F5H2Z3 F5H388 F5H6Q2 F5H747 P0CG48 Q5PY61 Q96C32
		NCBI	7316
		KEGG signaling	PPAR signaling pathway
		KEGG metabolic	Ubiquitin mediated proteolysis
28	PSMA7	ENSG00000101182	proteasome 20S subunit alpha 7
		UniProt	H0Y586 O14818
		NCBI	5688
		KEGG metabolic	Proteasome
28	PSMA5	ENSG00000143106	proteasome 20S subunit alpha 5
		UniProt	P28066
		NCBI	5686
		KEGG metabolic	Proteasome
26	RPS2	ENSG00000140988	ribosomal protein S2
		UniProt	E9PM36 E9PMM9 E9PPT0 E9PQD7 H0YE27 H0YEN5 H3BNG3 I3L404 P15880
		NCBI	6187
		KEGG metabolic	Ribosome
29	RAD23B	ENSG00000119318	RAD23 homolog B, nucleotide excision repair protein
		UniProt	H0Y579 P54727 Q5W0S4 Q5W0S5
		NCBI	5887
		KEGG metabolic	Protein processing in endoplasmic reticulum Nucleotide excision repair
29	PSMD11	ENSG00000108671	proteasome 26S subunit, non-ATPase 11
		UniProt	J3KSW3 J3QRY4 J3QS13 O00231
		NCBI	5717
		KEGG metabolic	Proteasome
29	PSMD7	ENSG00000103035	proteasome 26S subunit, non-ATPase 7
		UniProt	H3BNT7 H3BQV2 H3BTM8 P51665
		NCBI	5713
		KEGG metabolic	Proteasome
27	UBA1	ENSG00000130985	ubiquitin like modifier activating enzyme 1
		UniProt	P22314 Q5JRR6 Q5JRR9 Q5JRS0 Q5JRS1 Q5JRS2 Q5JRS3
		NCBI	7317
		KEGG metabolic	Ubiquitin mediated proteolysis
28	PSMC2	ENSG00000161057	proteasome 26S subunit, ATPase 2
		UniProt	C9JLS9 P35998
		NCBI	5701
		KEGG metabolic	Proteasome
27	VCP	ENSG00000165280	valosin containing protein
		UniProt	C9IZA5 C9JUP7 P55072
		NCBI	7415
		KEGG metabolic	Protein processing in endoplasmic reticulum
17	STAM2	ENSG00000115145	signal transducing adaptor molecule 2
		UniProt	O75886
		NCBI	10254
		KEGG signaling	JAK-STAT signaling pathway
		KEGG metabolic	Endocytosis
27	PSMC5	ENSG00000087191	proteasome 26S subunit, ATPase 5
		UniProt	J3KRP2 J3KTQ9 J3QLH6 J3QQM1 J3QRR3 J3QRW1 J3QSA9 J3QSE0 P62195
		NCBI	5705
		KEGG metabolic	Proteasome
28	PSMD2	ENSG00000175166	proteasome 26S subunit, non-ATPase 2
		UniProt	C9JPC0 F8WBS8 H7C1H2 H7C2Q3 Q13200
		NCBI	5708
		KEGG metabolic	Proteasome
29	PSMD14	ENSG00000115233	proteasome 26S subunit, non-ATPase 14
		UniProt	C9JW37 O00487
		NCBI	10213
		KEGG metabolic	Proteasome
28	PSMC1	ENSG00000100764	proteasome 26S subunit, ATPase 1
		UniProt	G3V4X1 P62191
		NCBI	5700
		KEGG metabolic	Proteasome
11	CSTF2T	ENSG00000177613	cleavage stimulation factor subunit 2 tau variant
		UniProt	Q9H0L4
		NCBI	23283
		KEGG metabolic	mRNA surveillance pathway
28	PSMD1	ENSG00000173692	proteasome 26S subunit, non-ATPase 1
		UniProt	A0A087WW66 C9J9M4 F8WCE3 H7BZR6 H7C378 Q99460
		NCBI	5707
		KEGG metabolic	Proteasome
25	UBQLN2	ENSG00000188021	ubiquilin 2
		UniProt	Q9UHD9
		NCBI	29978
		KEGG metabolic	Protein processing in endoplasmic reticulum
26	NPLOC4	ENSG00000182446	NPL4 homolog, ubiquitin recognition factor
		UniProt	A0A0D9SFI9 I3L0W3 I3L281 I3L283 I3L3I1 I3L4S2 I3L4U9 K7EJN1 Q8TAT6
		NCBI	55666
		KEGG metabolic	Protein processing in endoplasmic reticulum
16	CSTF2	ENSG00000101811	cleavage stimulation factor subunit 2
		UniProt	A0A0A0MT56 E7EWR4 E9PID8 P33240
		NCBI	1478
		KEGG metabolic	mRNA surveillance pathway
28	RAD23A	ENSG00000179262	RAD23 homolog A, nucleotide excision repair protein
		UniProt	A0A494C0B4 K7ELU6 K7ELW1 K7ENJ0 K7EQ16 P54725
		NCBI	5886
		KEGG metabolic	Protein processing in endoplasmic reticulum Nucleotide excision repair
24	PPIB	ENSG00000166794	peptidylprolyl isomerase B
		UniProt	P23284
		NCBI	5479
3	CD47	ENSG00000196776	CD47 molecule
		UniProt	A0A2R8Y484 H0YC40 H7BYS8 Q08722
		NCBI	961
		KEGG signaling	ECM-receptor interaction

Enrichment analysis

Search for enrichment of pathways or functional gene sets for your subnetwork genes

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	jSquid_subnetworks.xml	375.97 KB
	H.sapiens_subnetwork.tsv	78.51 KB

Species:

Network information:

Filter Results:

Network appearance:

ENSG00000135018

ADRM1

UBE2N

PSMD4

RACK1

PSMD6

PSMC3

PSMD13

UBC

PSMA7

PSMA5

RPS2

RAD23B

PSMD11

PSMD7

UBA1

PSMC2

VCP

STAM2

PSMC5

PSMD2

PSMD14

PSMC1

CSTF2T

PSMD1

UBQLN2

NPLOC4

CSTF2

RAD23A

PPIB

CD47

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