Found 1 of 1 query genes
Query interactions
- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000130511
- single stranded DNA bin…
- BANF1
- BAF nuclear assembly fa…
- 0.993
- Complex
- PIN1
- peptidylprolyl cis/tran…
- 0.979
- PPI
- LEMD2
- LEM domain nuclear enve…
- 0.950
- Complex
- XRCC1
- X-ray repair cross comp…
- 0.947
- Complex
- SSBP1
- single stranded DNA bin…
- 0.946
- Complex
- LDB1
- LIM domain binding 1
- 0.941
- Complex
- SSBP3
- single stranded DNA bin…
- 0.930
- PPI
- LMO4
- LIM domain only 4
- 0.816
- Complex
- XRN2
- 5'-3' exoribonuclease 2
- 0.729
- Complex
- SSBP2
- single stranded DNA bin…
- 0.643
- Complex
- CUX1
- cut like homeobox 1
- 0.614
- Complex
- S100A6
- S100 calcium binding pr…
- 0.596
- Complex
- TMPO
- thymopoietin
- 0.499
- Complex
Subnetwork gene interactions
ENSG00000130511
single stranded DNA binding protein 4
FunCoup
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- Ensembl
- UniProt
- NCBI
CUX1
cut like homeobox 1
FunCoup
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- Ensembl
- UniProt
- NCBI
TMPO
thymopoietin
FunCoup
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- Ensembl
- UniProt
- NCBI
XRN2
5'-3' exoribonuclease 2
FunCoup
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- Ensembl
- UniProt
- NCBI
LDB1
LIM domain binding 1
FunCoup
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- Ensembl
- UniProt
- NCBI
LEMD2
LEM domain nuclear envelope protein 2
FunCoup
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- Ensembl
- UniProt
- NCBI
SSBP1
single stranded DNA binding protein 1
FunCoup
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- Ensembl
- UniProt
- NCBI
SSBP2
single stranded DNA binding protein 2
FunCoup
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- Ensembl
- UniProt
- NCBI
PIN1
peptidylprolyl cis/trans isomerase, NIMA-interacting 1
FunCoup
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- Ensembl
- UniProt
- NCBI
XRCC1
X-ray repair cross complementing 1
FunCoup
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- Ensembl
- UniProt
- NCBI
S100A6
S100 calcium binding protein A6
FunCoup
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LMO4
LIM domain only 4
FunCoup
- Use as query
- Use pair as query
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- Ensembl
- UniProt
- NCBI
BANF1
BAF nuclear assembly factor 1
FunCoup
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- Ensembl
- UniProt
- NCBI
SSBP3
single stranded DNA binding protein 3
FunCoup
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- Add to current query
- Ensembl
- UniProt
- NCBI
Query genes
Subnetwork genes
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
12
|
CUX1 | ENSG00000257923 | cut like homeobox 1 | ||
| A0A2R8Y852 A0A2R8Y8D0 A0A2R8YDI1 P39880 Q13948 | ||||
| 1523 | ||||
12
|
TMPO | ENSG00000120802 | thymopoietin | ||
| G5E972 H0YJH7 P42166 P42167 | ||||
| 7112 | ||||
12
|
XRN2 | ENSG00000088930 | 5'-3' exoribonuclease 2 | ||
| Q9H0D6 | ||||
| 22803 | ||||
| RNA degradation Ribosome biogenesis in eukaryotes | ||||
12
|
LDB1 | ENSG00000198728 | LIM domain binding 1 | ||
| Q86U70 | ||||
| 8861 | ||||
12
|
LEMD2 | ENSG00000161904 | LEM domain nuclear envelope protein 2 | ||
| D6R958 D6RBV0 H0Y8H8 H0Y9B7 H7C2Z0 Q8NC56 | ||||
| 221496 | ||||
13
|
SSBP1 | ENSG00000106028 | single stranded DNA binding protein 1 | ||
| C9J8J0 C9K0U8 E7EUY5 Q04837 | ||||
| 6742 | ||||
| DNA replication Homologous recombination Mismatch repair | ||||
13
|
SSBP2 | ENSG00000145687 | single stranded DNA binding protein 2 | ||
| A0A087X159 D6RAC5 H0Y9M5 H0Y9V4 P81877 | ||||
| 23635 | ||||
5
|
PIN1 | ENSG00000127445 | peptidylprolyl cis/trans isomerase, NIMA-interacting 1 | ||
| K7EMU7 K7EN45 K7EP26 Q13526 | ||||
| 5300 | ||||
| RIG-I-like receptor signaling pathway | ||||
12
|
XRCC1 | ENSG00000073050 | X-ray repair cross complementing 1 | ||
| F5H8D7 M0QYS5 M0QZ96 M0R0D2 M0R1U8 P18887 | ||||
| 7515 | ||||
| Base excision repair | ||||
12
|
S100A6 | ENSG00000197956 | S100 calcium binding protein A6 | ||
| P06703 R4GN98 | ||||
| 6277 | ||||
12
|
LMO4 | ENSG00000143013 | LIM domain only 4 | ||
| P61968 | ||||
| 8543 | ||||
13
|
BANF1 | ENSG00000175334 | BAF nuclear assembly factor 1 | ||
| E9PJJ8 O75531 | ||||
| 8815 | ||||
13
|
SSBP3 | ENSG00000157216 | single stranded DNA binding protein 3 | ||
| A0A087WVT6 E9PK49 Q5T863 Q9BWW4 Q9NW25 | ||||
| 23648 |
Enrichment analysis
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
Copied subnetwork genes to clipboard
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jSquid_subnetworks.xml | 133.93 KB | |
H.sapiens_subnetwork.tsv | 11.88 KB |