- Interaction partners
- Confidence
- Network
- Evidence types
- SpeciesHSAMMURNOCFAGGADRECINDMECELBTASCEATHSPOBSUECOPFADDISSOSSCMJAOSA
- In Gold st.
- ID Query gene
- ID Query ortholog
Log-likelihood ratio (LLR) | |
---|---|
Highly positive | |
Positive | |
Zero | |
Negative | |
Highly negative | |
Known coupling | |
This network | |
Other network |
-
- ENSG00000126653
- nuclear speckle splicin…
- SRPK1
- SRSF protein kinase 1
- 0.989
- PPI
- DPF2
- double PHD fingers 2
- 0.978
- PPI
- CTNNBL1
- catenin beta like 1
- 0.974
- PPI
- BARD1
- BRCA1 associated RING d…
- 0.970
- PPI
- SMC4
- structural maintenance …
- 0.966
- Metabolic
- CRNKL1
- crooked neck pre-mRNA s…
- 0.965
- Metabolic
- DDX42
- DEAD-box helicase 42
- 0.954
- Metabolic
- JMJD6
- jumonji domain containi…
- 0.950
- PPI
- DNAJC6
- DnaJ heat shock protein…
- 0.946
- PPI
- PNN
- pinin, desmosome associ…
- 0.944
- Metabolic
- PRPF40A
- pre-mRNA processing fac…
- 0.934
- Metabolic
- CWC15
- CWC15 spliceosome assoc…
- 0.925
- Metabolic
- NEDD4
- NEDD4 E3 ubiquitin prot…
- 0.921
- PPI
- CHORDC1
- cysteine and histidine …
- 0.915
- PPI
- SUPT16H
- SPT16 homolog, facilita…
- 0.915
- Metabolic
- PRPF18
- pre-mRNA processing fac…
- 0.914
- Metabolic
- SRPK2
- SRSF protein kinase 2
- 0.912
- Complex
- SF3B1
- splicing factor 3b subu…
- 0.907
- Metabolic
- CSTF3
- cleavage stimulation fa…
- 0.906
- Metabolic
- MYO1C
- myosin IC
- 0.905
- PPI
- PRPF40B
- pre-mRNA processing fac…
- 0.901
- Metabolic
- DHX38
- DEAH-box helicase 38
- 0.895
- Metabolic
- SF3A3
- splicing factor 3a subu…
- 0.894
- Metabolic
- LUC7L2
- LUC7 like 2, pre-mRNA s…
- 0.888
- Metabolic
- CWC22
- CWC22 spliceosome assoc…
- 0.885
- Metabolic
- SMC5
- structural maintenance …
- 0.883
- Metabolic
- COPS2
- COP9 signalosome subuni…
- 0.858
- Metabolic
- BCAS2
- BCAS2 pre-mRNA processi…
- 0.856
- Metabolic
- DDX46
- DEAD-box helicase 46
- 0.856
- Metabolic
- SNW1
- SNW domain containing 1
- 0.854
- Metabolic
ENSG00000126653
nuclear speckle splicing regulatory protein 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SF3B1
splicing factor 3b subunit 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
LUC7L2
LUC7 like 2, pre-mRNA splicing factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDX42
DEAD-box helicase 42
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF40A
pre-mRNA processing factor 40 homolog A
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DDX46
DEAD-box helicase 46
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
JMJD6
jumonji domain containing 6, arginine demethylase and lysine hydroxylase
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SNW1
SNW domain containing 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PNN
pinin, desmosome associated protein
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CRNKL1
crooked neck pre-mRNA splicing factor 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF40B
pre-mRNA processing factor 40 homolog B
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CWC15
CWC15 spliceosome associated protein homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SMC5
structural maintenance of chromosomes 5
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BCAS2
BCAS2 pre-mRNA processing factor
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
BARD1
BRCA1 associated RING domain 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
PRPF18
pre-mRNA processing factor 18
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CTNNBL1
catenin beta like 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SMC4
structural maintenance of chromosomes 4
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DHX38
DEAH-box helicase 38
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CWC22
CWC22 spliceosome associated protein homolog
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SRPK2
SRSF protein kinase 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CSTF3
cleavage stimulation factor subunit 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
CHORDC1
cysteine and histidine rich domain containing 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SF3A3
splicing factor 3a subunit 3
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
SRPK1
SRSF protein kinase 1
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
COPS2
COP9 signalosome subunit 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DPF2
double PHD fingers 2
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
NEDD4
NEDD4 E3 ubiquitin protein ligase
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6
- Use as query
- Use pair as query
- Add to current query
- Ensembl
- UniProt
- NCBI
Symbol | Identifier | Description | |||
---|---|---|---|---|---|
26
|
SF3B1 | ENSG00000115524 | splicing factor 3b subunit 1 | ||
| A0A494C1M2 B4DGZ4 F8WC19 H7C341 O75533 | ||||
| 23451 | ||||
| Spliceosome | ||||
24
|
LUC7L2 | ENSG00000146963 | LUC7 like 2, pre-mRNA splicing factor | ||
| F8WEU3 Q9Y383 V9GZ75 | ||||
| 51631 | ||||
22
|
DDX42 | ENSG00000198231 | DEAD-box helicase 42 | ||
| A0A0A0MSJ0 J3KRE3 J3KRV0 J3KTK9 J3QRI2 Q86XP3 | ||||
| 11325 | ||||
| Spliceosome | ||||
23
|
PRPF40A | ENSG00000196504 | pre-mRNA processing factor 40 homolog A | ||
| A0A3F2YNY6 F5H578 H0YG38 H7BXZ7 H7C2N3 O75400 | ||||
| 55660 | ||||
| Spliceosome | ||||
24
|
DDX46 | ENSG00000145833 | DEAD-box helicase 46 | ||
| A0A0C4DG89 D6RJA6 H0Y9U3 H0YAD5 Q7L014 | ||||
| 9879 | ||||
| Spliceosome | ||||
27
|
SUPT16H | ENSG00000092201 | SPT16 homolog, facilitates chromatin remodeling subunit | ||
| G3V2X0 G3V401 G3V5A4 Q9Y5B9 | ||||
| 11198 | ||||
12
|
JMJD6 | ENSG00000070495 | jumonji domain containing 6, arginine demethylase and lysine hydroxylase | ||
| B2WTI3 B2WTI4 K7EJU9 Q6NYC1 | ||||
| 23210 | ||||
27
|
SNW1 | ENSG00000100603 | SNW domain containing 1 | ||
| G3V3A4 G3V4E0 G3V4X8 G3V5R3 Q13573 | ||||
| 22938 | ||||
| Notch signaling pathway | ||||
| Spliceosome | ||||
24
|
PNN | ENSG00000100941 | pinin, desmosome associated protein | ||
| G3V579 G3V5F0 Q9H307 | ||||
| 5411 | ||||
| RNA transport mRNA surveillance pathway | ||||
23
|
CRNKL1 | ENSG00000101343 | crooked neck pre-mRNA splicing factor 1 | ||
| A0A0C4DGD7 Q5JY65 Q9BZJ0 | ||||
| 51340 | ||||
| Spliceosome | ||||
22
|
PRPF40B | ENSG00000110844 | pre-mRNA processing factor 40 homolog B | ||
| F8VU11 H0YII7 Q6NWY9 | ||||
| 25766 | ||||
| Spliceosome | ||||
24
|
CWC15 | ENSG00000150316 | CWC15 spliceosome associated protein homolog | ||
| Q9P013 | ||||
| 51503 | ||||
| Spliceosome | ||||
21
|
SMC5 | ENSG00000198887 | structural maintenance of chromosomes 5 | ||
| Q8IY18 | ||||
| 23137 | ||||
26
|
BCAS2 | ENSG00000116752 | BCAS2 pre-mRNA processing factor | ||
| O75934 | ||||
| 10286 | ||||
| Spliceosome | ||||
9
|
BARD1 | ENSG00000138376 | BRCA1 associated RING domain 1 | ||
| A0A087WZ19 A0A087X0C6 A0A087X2H0 A0A494C142 C9IYG1 C9J6M1 F6MDI1 F8WCG2 Q99728 | ||||
| 580 | ||||
| Homologous recombination | ||||
25
|
PRPF18 | ENSG00000165630 | pre-mRNA processing factor 18 | ||
| Q5T9P7 Q5T9P8 Q99633 | ||||
| 8559 | ||||
| Spliceosome | ||||
26
|
CTNNBL1 | ENSG00000132792 | catenin beta like 1 | ||
| A0A087WUB9 A2A2P1 Q8WYA6 | ||||
| 56259 | ||||
| Spliceosome | ||||
22
|
SMC4 | ENSG00000113810 | structural maintenance of chromosomes 4 | ||
| C9IYK2 C9J578 C9J9E4 C9JJ64 C9JR83 C9JVD8 C9JWF0 E9PD53 F8WCB7 Q9NTJ3 | ||||
| 10051 | ||||
24
|
DHX38 | ENSG00000140829 | DEAH-box helicase 38 | ||
| H3BMS7 H3BQT9 H3BV01 J3KRT1 J3KSA8 J3KTG2 Q92620 | ||||
| 9785 | ||||
| Spliceosome | ||||
24
|
CWC22 | ENSG00000163510 | CWC22 spliceosome associated protein homolog | ||
| B7WP74 Q9HCG8 | ||||
| 57703 | ||||
20
|
SRPK2 | ENSG00000135250 | SRSF protein kinase 2 | ||
| C9J2M4 C9JWF7 F8WAV6 F8WBW4 H7C521 H7C5L6 P78362 | ||||
| 6733 | ||||
24
|
CSTF3 | ENSG00000176102 | cleavage stimulation factor subunit 3 | ||
| E9PJ06 E9PLP8 E9PNK2 H0YE74 Q12996 | ||||
| 1479 | ||||
| mRNA surveillance pathway | ||||
16
|
CHORDC1 | ENSG00000110172 | cysteine and histidine rich domain containing 1 | ||
| E9PHZ2 E9PIF7 E9PIZ4 E9PL00 E9PPQ5 E9PSD5 Q9UHD1 | ||||
| 26973 | ||||
26
|
SF3A3 | ENSG00000183431 | splicing factor 3a subunit 3 | ||
| Q12874 | ||||
| 10946 | ||||
| Spliceosome | ||||
27
|
SRPK1 | ENSG00000096063 | SRSF protein kinase 1 | ||
| D6RB98 D6RBF8 D6RBM8 D6RDZ3 H0Y932 H3BLV9 Q96SB4 | ||||
| 6732 | ||||
22
|
COPS2 | ENSG00000166200 | COP9 signalosome subunit 2 | ||
| B4DIH5 H0YKU5 H0YM03 H0YMC2 P61201 | ||||
| 9318 | ||||
8
|
DPF2 | ENSG00000133884 | double PHD fingers 2 | ||
| E9PN04 H0YEI1 J3KMZ8 Q92785 | ||||
| 5977 | ||||
4
|
NEDD4 | ENSG00000069869 | NEDD4 E3 ubiquitin protein ligase | ||
| A0A3B3IUC1 H0Y8H4 H0Y8X6 H0Y9L1 H0YA37 P46934 | ||||
| 4734 | ||||
| Tight junction | ||||
| Endocytosis Ubiquitin mediated proteolysis | ||||
2
|
DNAJC6 | ENSG00000116675 | DnaJ heat shock protein family (Hsp40) member C6 | ||
| O75061 S4R305 | ||||
| 9829 | ||||
| Endocytosis | ||||
2
|
MYO1C | ENSG00000197879 | myosin IC | ||
| F5H6E2 I3L2C3 I3L3F5 I3L3Y6 I3L501 O00159 | ||||
| 4641 |
Search for enrichment of pathways or functional gene sets for your subnetwork genes | ||
To use PathwAX, first use the button below to copy the subnetwork genes and then paste them in PathwAX | ||
- Use as query
- Add to current query
jSquid_subnetworks.xml | 316.75 KB | |
H.sapiens_subnetwork.tsv | 58.56 KB |